RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 JAG1P78504 1218 aa25.12■■□□□ 1.61
TMEM50B-204ENST00000442441 NAA16Q6N069 864 aaPredicted RBP25.12■■□□□ 1.61
TMEM50B-204ENST00000442441 TXNRD2Q9NNW7 524 aa25.12■■□□□ 1.61
TMEM50B-204ENST00000442441 CUL9Q8IWT3 2517 aa25.12■■□□□ 1.61
TMEM50B-204ENST00000442441 GNAI2P04899 355 aa25.11■■□□□ 1.61
TMEM50B-204ENST00000442441 MAGEA10P43363 369 aaPredicted RBP25.11■■□□□ 1.61
TMEM50B-204ENST00000442441 PPP4CP60510 307 aa25.11■■□□□ 1.61
TMEM50B-204ENST00000442441 METTL16Q86W50 562 aaKnown RBP25.11■■□□□ 1.61
TMEM50B-204ENST00000442441 FOXP4Q8IVH2 680 aaPredicted RBP25.11■■□□□ 1.61
TMEM50B-204ENST00000442441 DNAJC18Q9H819 358 aa25.11■■□□□ 1.61
TMEM50B-204ENST00000442441 GINM1Q9NU53 330 aa25.11■■□□□ 1.61
TMEM50B-204ENST00000442441 PNMA6EA0A0J9YXQ4 647 aa25.1■■□□□ 1.61
TMEM50B-204ENST00000442441 USP17L10C9JJH3 530 aa25.1■■□□□ 1.61
TMEM50B-204ENST00000442441 MAPK4P31152 587 aa25.1■■□□□ 1.61
TMEM50B-204ENST00000442441 LRIT3Q3SXY7 679 aa25.1■■□□□ 1.61
TMEM50B-204ENST00000442441 MAPKAPK5Q8IW41 473 aa25.1■■□□□ 1.61
TMEM50B-204ENST00000442441 TRMT44Q8IYL2 757 aaKnown RBP25.1■■□□□ 1.61
TMEM50B-204ENST00000442441 TGFBRAP1Q8WUH2 860 aa25.1■■□□□ 1.61
TMEM50B-204ENST00000442441 TRIM34Q9BYJ4 488 aa25.1■■□□□ 1.61
TMEM50B-204ENST00000442441 SNRKQ9NRH2 765 aa25.1■■□□□ 1.61
TMEM50B-204ENST00000442441 RBPJLQ9UBG7 517 aa25.1■■□□□ 1.61
TMEM50B-204ENST00000442441 FLT1P17948 1338 aa25.1■■□□□ 1.61
TMEM50B-204ENST00000442441 PDE3AQ14432 1141 aa25.09■■□□□ 1.61
TMEM50B-204ENST00000442441 CRACR2BQ8N4Y2 399 aaPredicted RBP25.09■■□□□ 1.61
TMEM50B-204ENST00000442441 DEFB123Q8N688 67 aa25.09■■□□□ 1.61
TMEM50B-204ENST00000442441 PFASO15067 1338 aa25.09■■□□□ 1.61
TMEM50B-204ENST00000442441 GDF11O95390 407 aa25.08■■□□□ 1.61
TMEM50B-204ENST00000442441 ZKSCAN1P17029 563 aaPredicted RBP25.08■■□□□ 1.61
TMEM50B-204ENST00000442441 SHROOM1Q2M3G4 852 aaPredicted RBP25.08■■□□□ 1.61
TMEM50B-204ENST00000442441 TDHQ8IZJ6 230 aa25.08■■□□□ 1.61
TMEM50B-204ENST00000442441 USP6NLQ92738 828 aa25.08■■□□□ 1.61
TMEM50B-204ENST00000442441 PALD1Q9ULE6 856 aa25.08■■□□□ 1.61
TMEM50B-204ENST00000442441 ZBTB21Q9ULJ3 1066 aa25.08■■□□□ 1.61
TMEM50B-204ENST00000442441 MAST2Q6P0Q8 1798 aa25.08■■□□□ 1.6
TMEM50B-204ENST00000442441 ERVK-9P63128 1117 aa25.07■■□□□ 1.6
TMEM50B-204ENST00000442441 ERVK-24P63145 666 aa25.07■■□□□ 1.6
TMEM50B-204ENST00000442441 CACNB2Q08289 660 aaPredicted RBP25.07■■□□□ 1.6
TMEM50B-204ENST00000442441 Q3C1V9 767 aa25.07■■□□□ 1.6
TMEM50B-204ENST00000442441 TTC39AQ5SRH9 613 aa25.07■■□□□ 1.6
TMEM50B-204ENST00000442441 ADGRA1Q86SQ6 560 aa25.07■■□□□ 1.6
TMEM50B-204ENST00000442441 CCAR1Q8IX12 1150 aaKnown RBP25.07■■□□□ 1.6
TMEM50B-204ENST00000442441 GTF3C2Q8WUA4 911 aaPredicted RBP25.07■■□□□ 1.6
TMEM50B-204ENST00000442441 IPO8O15397 1037 aaKnown RBP25.06■■□□□ 1.6
TMEM50B-204ENST00000442441 COL6A1P12109 1028 aa25.06■■□□□ 1.6
TMEM50B-204ENST00000442441 RGS2P41220 211 aa25.06■■□□□ 1.6
TMEM50B-204ENST00000442441 CCDC158Q5M9N0 1113 aa25.06■■□□□ 1.6
TMEM50B-204ENST00000442441 UBE2OQ9C0C9 1292 aaKnown RBP25.06■■□□□ 1.6
TMEM50B-204ENST00000442441 PORCNQ9H237 461 aa25.06■■□□□ 1.6
TMEM50B-204ENST00000442441 GPR108Q9NPR9 543 aa25.06■■□□□ 1.6
TMEM50B-204ENST00000442441 CDK5RAP2Q96SN8 1893 aa25.06■■□□□ 1.6
TMEM50B-204ENST00000442441 FOCADQ5VW36 1801 aa25.05■■□□□ 1.6
TMEM50B-204ENST00000442441 CYP2E1P05181 493 aaPredicted RBP25.05■■□□□ 1.6
TMEM50B-204ENST00000442441 TRIM27P14373 513 aa25.05■■□□□ 1.6
TMEM50B-204ENST00000442441 MORN1Q5T089 497 aa25.05■■□□□ 1.6
TMEM50B-204ENST00000442441 LHX8Q68G74 356 aa25.05■■□□□ 1.6
TMEM50B-204ENST00000442441 Q7L0L9 218 aa25.05■■□□□ 1.6
TMEM50B-204ENST00000442441 GPR142Q7Z601 462 aa25.05■■□□□ 1.6
TMEM50B-204ENST00000442441 PAGR1Q9BTK6 254 aa25.05■■□□□ 1.6
TMEM50B-204ENST00000442441 EMILIN3Q9NT22 766 aa25.05■■□□□ 1.6
TMEM50B-204ENST00000442441 CCL14Q16627 93 aa25.04■■□□□ 1.6
TMEM50B-204ENST00000442441 TNNI3KQ59H18 835 aa25.04■■□□□ 1.6
TMEM50B-204ENST00000442441 USP17L2Q6R6M4 530 aa25.04■■□□□ 1.6
TMEM50B-204ENST00000442441 PLEKHH3Q7Z736 793 aa25.04■■□□□ 1.6
TMEM50B-204ENST00000442441 DBNDD2Q9BQY9 259 aa25.04■■□□□ 1.6
TMEM50B-204ENST00000442441 SAP30BPQ9UHR5 308 aaKnown RBP25.04■■□□□ 1.6
TMEM50B-204ENST00000442441 FPGT-TNNI3KV9GXZ4 949 aa25.04■■□□□ 1.6
TMEM50B-204ENST00000442441 IGSF3O75054 1194 aa25.03■■□□□ 1.6
TMEM50B-204ENST00000442441 HLA-DOAP06340 250 aa25.03■■□□□ 1.6
TMEM50B-204ENST00000442441 CCND3P30281 292 aaPredicted RBP25.03■■□□□ 1.6
TMEM50B-204ENST00000442441 POTEEQ6S8J3 1075 aa25.03■■□□□ 1.6
TMEM50B-204ENST00000442441 ATF7IPQ6VMQ6 1270 aa25.03■■□□□ 1.6
TMEM50B-204ENST00000442441 APBA2Q99767 749 aa25.03■■□□□ 1.6
TMEM50B-204ENST00000442441 TNNQ9UQP3 1299 aa25.03■■□□□ 1.6
TMEM50B-204ENST00000442441 STXBP5LQ9Y2K9 1186 aa25.02■■□□□ 1.6
TMEM50B-204ENST00000442441 LRRC26Q2I0M4 334 aa25.01■■□□□ 1.59
TMEM50B-204ENST00000442441 ZNF512BQ96KM6 892 aaPredicted RBP25.01■■□□□ 1.59
TMEM50B-204ENST00000442441 CWC22Q9HCG8 908 aaKnown RBP25.01■■□□□ 1.59
TMEM50B-204ENST00000442441 MTMR10Q9NXD2 777 aa25.01■■□□□ 1.59
TMEM50B-204ENST00000442441 GH2P01242 217 aa25■■□□□ 1.59
TMEM50B-204ENST00000442441 ZAP70P43403 619 aa25■■□□□ 1.59
TMEM50B-204ENST00000442441 OS9Q13438 667 aaPredicted RBP25■■□□□ 1.59
TMEM50B-204ENST00000442441 POLA2Q14181 598 aa25■■□□□ 1.59
TMEM50B-204ENST00000442441 FRAT1Q92837 279 aaPredicted RBP25■■□□□ 1.59
TMEM50B-204ENST00000442441 CLUAP1Q96AJ1 413 aa25■■□□□ 1.59
TMEM50B-204ENST00000442441 C12orf42Q96LP6 360 aa25■■□□□ 1.59
TMEM50B-204ENST00000442441 PIH1D3Q9NQM4 214 aaKnown RBP25■■□□□ 1.59
TMEM50B-204ENST00000442441 RABGAP1Q9Y3P9 1069 aa25■■□□□ 1.59
TMEM50B-204ENST00000442441 MYO5AQ9Y4I1 1855 aaKnown RBP25■■□□□ 1.59
TMEM50B-204ENST00000442441 DYNLL1P63167 89 aaKnown RBP24.99■■□□□ 1.59
TMEM50B-204ENST00000442441 MAP2K5Q13163 448 aa24.99■■□□□ 1.59
TMEM50B-204ENST00000442441 DNAH12Q6ZR08 3092 aa24.99■■□□□ 1.59
TMEM50B-204ENST00000442441 USP17L15C9J2P7 530 aa24.98■■□□□ 1.59
TMEM50B-204ENST00000442441 USP17L13C9JLJ4 530 aa24.98■■□□□ 1.59
TMEM50B-204ENST00000442441 USP17L11C9JVI0 530 aa24.98■■□□□ 1.59
TMEM50B-204ENST00000442441 USP17L18D6R9N7 530 aa24.98■■□□□ 1.59
TMEM50B-204ENST00000442441 USP17L22D6RA61 530 aa24.98■■□□□ 1.59
TMEM50B-204ENST00000442441 USP17L17D6RBQ6 530 aa24.98■■□□□ 1.59
TMEM50B-204ENST00000442441 USP17L19D6RCP7 530 aa24.98■■□□□ 1.59
TMEM50B-204ENST00000442441 USP17L20D6RJB6 530 aa24.98■■□□□ 1.59
TMEM50B-204ENST00000442441 CNMDO75829 334 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms