RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 GCLCP48506 637 aaPredicted RBP9.48□□□□□ -0.89
CD44-211ENST00000442151 MAP3K12Q12852 859 aa9.48□□□□□ -0.89
CD44-211ENST00000442151 CRACR2BQ8N4Y2 399 aaPredicted RBP9.48□□□□□ -0.89
CD44-211ENST00000442151 PROCA1Q8NCQ7 364 aaPredicted RBP9.48□□□□□ -0.89
CD44-211ENST00000442151 SMCR8Q8TEV9 937 aaPredicted RBP9.48□□□□□ -0.89
CD44-211ENST00000442151 KCTD12Q96CX2 325 aaKnown RBP9.48□□□□□ -0.89
CD44-211ENST00000442151 SRRDQ9UH36 339 aa9.48□□□□□ -0.89
CD44-211ENST00000442151 PTCH2Q9Y6C5 1203 aa9.48□□□□□ -0.89
CD44-211ENST00000442151 ATRNL1Q5VV63 1379 aa9.48□□□□□ -0.89
CD44-211ENST00000442151 C19orf81C9J6K1 198 aa9.47□□□□□ -0.89
CD44-211ENST00000442151 ASNSP08243 561 aa9.47□□□□□ -0.89
CD44-211ENST00000442151 RHBDL3P58872 404 aa9.47□□□□□ -0.89
CD44-211ENST00000442151 ZFPM1Q8IX07 1006 aa9.47□□□□□ -0.89
CD44-211ENST00000442151 ZNF280CQ8ND82 737 aa9.47□□□□□ -0.89
CD44-211ENST00000442151 GTF3C2Q8WUA4 911 aaPredicted RBP9.47□□□□□ -0.89
CD44-211ENST00000442151 COA7Q96BR5 231 aa9.47□□□□□ -0.89
CD44-211ENST00000442151 ZNF333Q96JL9 665 aa9.47□□□□□ -0.89
CD44-211ENST00000442151 TMOD4Q9NZQ9 345 aa9.47□□□□□ -0.89
CD44-211ENST00000442151 BIN2Q9UBW5 565 aaPredicted RBP9.47□□□□□ -0.89
CD44-211ENST00000442151 CPA4Q9UI42 421 aa9.47□□□□□ -0.89
CD44-211ENST00000442151 TAOK2Q9UL54 1235 aa9.47□□□□□ -0.89
CD44-211ENST00000442151 DDX19BQ9UMR2 479 aa9.47□□□□□ -0.89
CD44-211ENST00000442151 AGTPBP1Q9UPW5 1226 aa9.47□□□□□ -0.89
CD44-211ENST00000442151 DDTLA6NHG4 134 aaPredicted RBP9.47□□□□□ -0.89
CD44-211ENST00000442151 HRO43593 1189 aa9.47□□□□□ -0.89
CD44-211ENST00000442151 RAB11FIP3O75154 756 aa9.47□□□□□ -0.89
CD44-211ENST00000442151 MCAMP43121 646 aa9.47□□□□□ -0.89
CD44-211ENST00000442151 TBC1D9Q6ZT07 1266 aa9.47□□□□□ -0.89
CD44-211ENST00000442151 CLASRPQ8N2M8 674 aaKnown RBP9.47□□□□□ -0.89
CD44-211ENST00000442151 OTOFQ9HC10 1997 aa9.46□□□□□ -0.89
CD44-211ENST00000442151 GRK4P32298 578 aa9.46□□□□□ -0.9
CD44-211ENST00000442151 CAP2P40123 477 aa9.46□□□□□ -0.9
CD44-211ENST00000442151 GPAT2Q6NUI2 795 aa9.46□□□□□ -0.9
CD44-211ENST00000442151 TTC6Q86TZ1 520 aa9.46□□□□□ -0.9
CD44-211ENST00000442151 DBNDD2Q9BQY9 259 aa9.46□□□□□ -0.9
CD44-211ENST00000442151 WDR18Q9BV38 432 aa9.46□□□□□ -0.9
CD44-211ENST00000442151 PDE4DIPQ5VU43 2346 aa9.46□□□□□ -0.9
CD44-211ENST00000442151 MYPNQ86TC9 1320 aa9.46□□□□□ -0.9
CD44-211ENST00000442151 BCRP11274 1271 aa9.45□□□□□ -0.9
CD44-211ENST00000442151 CYP7A1P22680 504 aa9.45□□□□□ -0.9
CD44-211ENST00000442151 USP5P45974 858 aa9.45□□□□□ -0.9
CD44-211ENST00000442151 SH3BP5LQ7L8J4 393 aa9.45□□□□□ -0.9
CD44-211ENST00000442151 KIF1BPQ96EK5 621 aa9.45□□□□□ -0.9
CD44-211ENST00000442151 DDX4Q9NQI0 724 aaKnown RBP9.45□□□□□ -0.9
CD44-211ENST00000442151 AATFQ9NY61 560 aaKnown RBP eCLIP9.45□□□□□ -0.9
CD44-211ENST00000442151 TRIM75PA6NK02 468 aa9.45□□□□□ -0.9
CD44-211ENST00000442151 IDH1O75874 414 aaKnown RBP9.45□□□□□ -0.9
CD44-211ENST00000442151 SLC34A2O95436 690 aa9.45□□□□□ -0.9
CD44-211ENST00000442151 IFIT2P09913 472 aaKnown RBP9.45□□□□□ -0.9
CD44-211ENST00000442151 SPP2Q13103 211 aa9.45□□□□□ -0.9
CD44-211ENST00000442151 IRF5Q13568 498 aa9.45□□□□□ -0.9
CD44-211ENST00000442151 SH3D19Q5HYK7 790 aa9.45□□□□□ -0.9
CD44-211ENST00000442151 CEP85Q6P2H3 762 aa9.45□□□□□ -0.9
CD44-211ENST00000442151 CCAR1Q8IX12 1150 aaKnown RBP9.45□□□□□ -0.9
CD44-211ENST00000442151 PXYLP1Q8TE99 480 aa9.45□□□□□ -0.9
CD44-211ENST00000442151 SH3RF3Q8TEJ3 882 aaPredicted RBP9.45□□□□□ -0.9
CD44-211ENST00000442151 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.45□□□□□ -0.9
CD44-211ENST00000442151 HTATIP2Q9BUP3 242 aa9.45□□□□□ -0.9
CD44-211ENST00000442151 CABP5Q9NP86 173 aa9.45□□□□□ -0.9
CD44-211ENST00000442151 SNRKQ9NRH2 765 aa9.45□□□□□ -0.9
CD44-211ENST00000442151 RFX7Q2KHR2 1363 aa9.45□□□□□ -0.9
CD44-211ENST00000442151 TNPO2O14787 897 aaKnown RBP9.44□□□□□ -0.9
CD44-211ENST00000442151 CYP2E1P05181 493 aaPredicted RBP9.44□□□□□ -0.9
CD44-211ENST00000442151 ZAP70P43403 619 aa9.44□□□□□ -0.9
CD44-211ENST00000442151 MOGSQ13724 837 aa9.44□□□□□ -0.9
CD44-211ENST00000442151 FAM110CQ1W6H9 321 aa9.44□□□□□ -0.9
CD44-211ENST00000442151 AACSQ86V21 672 aa9.44□□□□□ -0.9
CD44-211ENST00000442151 METTL16Q86W50 562 aaKnown RBP9.44□□□□□ -0.9
CD44-211ENST00000442151 TRMT44Q8IYL2 757 aaKnown RBP9.44□□□□□ -0.9
CD44-211ENST00000442151 TGFBRAP1Q8WUH2 860 aa9.44□□□□□ -0.9
CD44-211ENST00000442151 CCDC8Q9H0W5 538 aaPredicted RBP9.44□□□□□ -0.9
CD44-211ENST00000442151 TNNQ9UQP3 1299 aa9.44□□□□□ -0.9
CD44-211ENST00000442151 ADGRA2Q96PE1 1338 aa9.43□□□□□ -0.9
CD44-211ENST00000442151 USP17L10C9JJH3 530 aa9.43□□□□□ -0.9
CD44-211ENST00000442151 GJB1P08034 283 aa9.43□□□□□ -0.9
CD44-211ENST00000442151 EN2P19622 333 aaPredicted RBP9.43□□□□□ -0.9
CD44-211ENST00000442151 USP14P54578 494 aa9.43□□□□□ -0.9
CD44-211ENST00000442151 IRX3P78415 501 aaPredicted RBP9.43□□□□□ -0.9
CD44-211ENST00000442151 USP17L2Q6R6M4 530 aa9.43□□□□□ -0.9
CD44-211ENST00000442151 AMOTL1Q8IY63 956 aa9.43□□□□□ -0.9
CD44-211ENST00000442151 DDRGK1Q96HY6 314 aa9.43□□□□□ -0.9
CD44-211ENST00000442151 C1orf115Q9H7X2 142 aa9.43□□□□□ -0.9
CD44-211ENST00000442151 LHX6Q9UPM6 363 aa9.43□□□□□ -0.9
CD44-211ENST00000442151 DOCK2Q92608 1830 aa9.43□□□□□ -0.9
CD44-211ENST00000442151 ADCY3O60266 1144 aa9.42□□□□□ -0.9
CD44-211ENST00000442151 GLRX3O76003 335 aaKnown RBP9.42□□□□□ -0.9
CD44-211ENST00000442151 CYP2C8P10632 490 aa9.42□□□□□ -0.9
CD44-211ENST00000442151 HOXA7P31268 230 aaPredicted RBP9.42□□□□□ -0.9
CD44-211ENST00000442151 BACE1P56817 501 aa9.42□□□□□ -0.9
CD44-211ENST00000442151 ZSCAN25Q6NSZ9 544 aa9.42□□□□□ -0.9
CD44-211ENST00000442151 PI16Q6UXB8 463 aa9.42□□□□□ -0.9
CD44-211ENST00000442151 MAPKAPK5Q8IW41 473 aa9.42□□□□□ -0.9
CD44-211ENST00000442151 RHPN1Q8TCX5 695 aa9.42□□□□□ -0.9
CD44-211ENST00000442151 SH3TC2Q8TF17 1288 aa9.42□□□□□ -0.9
CD44-211ENST00000442151 EAF2Q96CJ1 260 aaPredicted RBP9.42□□□□□ -0.9
CD44-211ENST00000442151 CRNKL1Q9BZJ0 848 aaKnown RBP9.42□□□□□ -0.9
CD44-211ENST00000442151 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.42□□□□□ -0.9
CD44-211ENST00000442151 DBNLQ9UJU6 430 aaKnown RBP9.42□□□□□ -0.9
CD44-211ENST00000442151 NR2E3Q9Y5X4 410 aa9.42□□□□□ -0.9
CD44-211ENST00000442151 FLT1P17948 1338 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms