RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 CDX2Q99626 313 aaPredicted RBP12.38□□□□□ -0.43
SYN3-204ENST00000441821 APBA2Q99767 749 aa12.38□□□□□ -0.43
SYN3-204ENST00000441821 SENP6Q9GZR1 1112 aaPredicted RBP12.38□□□□□ -0.43
SYN3-204ENST00000441821 COPRSQ9NQ92 184 aa12.38□□□□□ -0.43
SYN3-204ENST00000441821 PI4KBQ9UBF8 816 aa12.38□□□□□ -0.43
SYN3-204ENST00000441821 UBTFL1P0CB47 393 aaPredicted RBP12.37□□□□□ -0.43
SYN3-204ENST00000441821 MAFAQ8NHW3 353 aaPredicted RBP12.37□□□□□ -0.43
SYN3-204ENST00000441821 NSUN4Q96CB9 384 aaKnown RBP12.37□□□□□ -0.43
SYN3-204ENST00000441821 XAGE2Q96GT9 111 aa12.37□□□□□ -0.43
SYN3-204ENST00000441821 PORCNQ9H237 461 aa12.37□□□□□ -0.43
SYN3-204ENST00000441821 SEMA6BQ9H3T3 888 aa12.37□□□□□ -0.43
SYN3-204ENST00000441821 PRKAG2Q9UGJ0 569 aa12.37□□□□□ -0.43
SYN3-204ENST00000441821 MAST2Q6P0Q8 1798 aa12.37□□□□□ -0.43
SYN3-204ENST00000441821 USP17L10C9JJH3 530 aa12.36□□□□□ -0.43
SYN3-204ENST00000441821 MSCO60682 206 aa12.36□□□□□ -0.43
SYN3-204ENST00000441821 MAP2K5Q13163 448 aa12.36□□□□□ -0.43
SYN3-204ENST00000441821 MVPQ14764 893 aaKnown RBP12.36□□□□□ -0.43
SYN3-204ENST00000441821 SSH1Q8WYL5 1049 aa12.36□□□□□ -0.43
SYN3-204ENST00000441821 EDC3Q96F86 508 aaKnown RBP12.36□□□□□ -0.43
SYN3-204ENST00000441821 DHX36Q9H2U1 1008 aaKnown RBP12.36□□□□□ -0.43
SYN3-204ENST00000441821 GINM1Q9NU53 330 aa12.36□□□□□ -0.43
SYN3-204ENST00000441821 PA2G4Q9UQ80 394 aaKnown RBP12.36□□□□□ -0.43
SYN3-204ENST00000441821 HDAC5Q9UQL6 1122 aa12.36□□□□□ -0.43
SYN3-204ENST00000441821 AKAP2Q9Y2D5 859 aa12.36□□□□□ -0.43
SYN3-204ENST00000441821 FRMPD3Q5JV73 1810 aa12.35□□□□□ -0.43
SYN3-204ENST00000441821 A0A1B0GUL7 405 aa12.35□□□□□ -0.43
SYN3-204ENST00000441821 DNM1LO00429 736 aa12.35□□□□□ -0.43
SYN3-204ENST00000441821 GLRX3O76003 335 aaKnown RBP12.35□□□□□ -0.43
SYN3-204ENST00000441821 JAG1P78504 1218 aa12.35□□□□□ -0.43
SYN3-204ENST00000441821 MFSD14CQ5VZR4 134 aa12.35□□□□□ -0.43
SYN3-204ENST00000441821 POTEEQ6S8J3 1075 aa12.35□□□□□ -0.43
SYN3-204ENST00000441821 METTL16Q86W50 562 aaKnown RBP12.35□□□□□ -0.43
SYN3-204ENST00000441821 TEX11Q8IYF3 940 aa12.35□□□□□ -0.43
SYN3-204ENST00000441821 LPAR1Q92633 364 aa12.35□□□□□ -0.43
SYN3-204ENST00000441821 SYMPKQ92797 1274 aaKnown RBP12.35□□□□□ -0.43
SYN3-204ENST00000441821 HMG20BQ9P0W2 317 aa12.35□□□□□ -0.43
SYN3-204ENST00000441821 DDX20Q9UHI6 824 aaKnown RBP12.35□□□□□ -0.43
SYN3-204ENST00000441821 ATN1P54259 1190 aaPredicted RBP12.34□□□□□ -0.43
SYN3-204ENST00000441821 RTP1P59025 263 aa12.34□□□□□ -0.43
SYN3-204ENST00000441821 CCNA1P78396 465 aa12.34□□□□□ -0.43
SYN3-204ENST00000441821 SHHQ15465 462 aa12.34□□□□□ -0.43
SYN3-204ENST00000441821 TBC1D9Q6ZT07 1266 aa12.34□□□□□ -0.43
SYN3-204ENST00000441821 FOXP4Q8IVH2 680 aaPredicted RBP12.34□□□□□ -0.43
SYN3-204ENST00000441821 SPATA5Q8NB90 893 aa12.34□□□□□ -0.43
SYN3-204ENST00000441821 PAGR1Q9BTK6 254 aa12.34□□□□□ -0.43
SYN3-204ENST00000441821 CWC22Q9HCG8 908 aaKnown RBP12.34□□□□□ -0.43
SYN3-204ENST00000441821 EMILIN3Q9NT22 766 aa12.34□□□□□ -0.43
SYN3-204ENST00000441821 FLRT1Q9NZU1 646 aa12.34□□□□□ -0.43
SYN3-204ENST00000441821 RAI14Q9P0K7 980 aa12.34□□□□□ -0.43
SYN3-204ENST00000441821 RABGAP1Q9Y3P9 1069 aa12.34□□□□□ -0.43
SYN3-204ENST00000441821 LTBP2Q14767 1821 aa12.34□□□□□ -0.43
SYN3-204ENST00000441821 ZNF521Q96K83 1311 aa12.34□□□□□ -0.43
SYN3-204ENST00000441821 SIPA1L1O43166 1804 aa12.33□□□□□ -0.44
SYN3-204ENST00000441821 SLC15A5A6NIM6 579 aa12.33□□□□□ -0.44
SYN3-204ENST00000441821 HOXC6P09630 235 aa12.33□□□□□ -0.44
SYN3-204ENST00000441821 SMAD3P84022 425 aaKnown RBP12.33□□□□□ -0.44
SYN3-204ENST00000441821 USP17L2Q6R6M4 530 aa12.33□□□□□ -0.44
SYN3-204ENST00000441821 SH3RF3Q8TEJ3 882 aaPredicted RBP12.33□□□□□ -0.44
SYN3-204ENST00000441821 MYLIPQ8WY64 445 aa12.33□□□□□ -0.44
SYN3-204ENST00000441821 DNAJC18Q9H819 358 aa12.33□□□□□ -0.44
SYN3-204ENST00000441821 CNMDO75829 334 aa12.32□□□□□ -0.44
SYN3-204ENST00000441821 BAG3O95817 575 aa12.32□□□□□ -0.44
SYN3-204ENST00000441821 PLCG2P16885 1265 aa12.32□□□□□ -0.44
SYN3-204ENST00000441821 PTPREP23469 700 aa12.32□□□□□ -0.44
SYN3-204ENST00000441821 CNGA1P29973 690 aa12.32□□□□□ -0.44
SYN3-204ENST00000441821 ATP2B2Q01814 1243 aa12.32□□□□□ -0.44
SYN3-204ENST00000441821 TFCP2Q12800 502 aa12.32□□□□□ -0.44
SYN3-204ENST00000441821 SHROOM1Q2M3G4 852 aaPredicted RBP12.32□□□□□ -0.44
SYN3-204ENST00000441821 ALDH1L2Q3SY69 923 aa12.32□□□□□ -0.44
SYN3-204ENST00000441821 C9orf50Q5SZB4 431 aa12.32□□□□□ -0.44
SYN3-204ENST00000441821 PI16Q6UXB8 463 aa12.32□□□□□ -0.44
SYN3-204ENST00000441821 CRACR2BQ8N4Y2 399 aaPredicted RBP12.32□□□□□ -0.44
SYN3-204ENST00000441821 NEUROD6Q96NK8 337 aa12.32□□□□□ -0.44
SYN3-204ENST00000441821 NOL10Q9BSC4 688 aaKnown RBP12.32□□□□□ -0.44
SYN3-204ENST00000441821 TTYH1Q9H313 450 aaPredicted RBP12.32□□□□□ -0.44
SYN3-204ENST00000441821 ZBTB21Q9ULJ3 1066 aa12.32□□□□□ -0.44
SYN3-204ENST00000441821 ATP11BQ9Y2G3 1177 aa12.32□□□□□ -0.44
SYN3-204ENST00000441821 USP17L15C9J2P7 530 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 USP17L13C9JLJ4 530 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 USP17L11C9JVI0 530 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 USP17L18D6R9N7 530 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 USP17L22D6RA61 530 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 USP17L17D6RBQ6 530 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 USP17L19D6RCP7 530 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 USP17L20D6RJB6 530 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 GDF11O95390 407 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 IGHA2P01877 340 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 FOSL2P15408 326 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 ARID4AP29374 1257 aaPredicted RBP12.31□□□□□ -0.44
SYN3-204ENST00000441821 PPP4CP60510 307 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 USP17L24Q0WX57 530 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 GRB14Q14449 540 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 SLC39A5Q6ZMH5 540 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 ARRDC4Q8NCT1 418 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 TGFBRAP1Q8WUH2 860 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 BADQ92934 168 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 C12orf42Q96LP6 360 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 TRIM34Q9BYJ4 488 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 LRP2BPQ9P2M1 347 aa12.31□□□□□ -0.44
SYN3-204ENST00000441821 TMEM265A0A087WTH1 108 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms