RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 COL9A3Q14050 684 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-209ENST00000440653 SLFNL1Q499Z3 407 aa10.65□□□□□ -0.7
HDAC6-209ENST00000440653 GIMAP6Q6P9H5 292 aa10.65□□□□□ -0.7
HDAC6-209ENST00000440653 OTOP1Q7RTM1 612 aa10.65□□□□□ -0.7
HDAC6-209ENST00000440653 VPS37DQ86XT2 251 aa10.65□□□□□ -0.7
HDAC6-209ENST00000440653 TBC1D10CQ8IV04 446 aa10.65□□□□□ -0.7
HDAC6-209ENST00000440653 HELBQ8NG08 1087 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-209ENST00000440653 PDLIM2Q96JY6 352 aa10.65□□□□□ -0.7
HDAC6-209ENST00000440653 LRRC2Q9BYS8 371 aa10.65□□□□□ -0.7
HDAC6-209ENST00000440653 LRP2BPQ9P2M1 347 aa10.65□□□□□ -0.7
HDAC6-209ENST00000440653 BAZ2AQ9UIF9 1905 aaKnown RBP10.64□□□□□ -0.71
HDAC6-209ENST00000440653 FOCADQ5VW36 1801 aa10.64□□□□□ -0.71
HDAC6-209ENST00000440653 GADD45BO75293 160 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-209ENST00000440653 CAVIN2O95810 425 aa10.64□□□□□ -0.71
HDAC6-209ENST00000440653 TDO2P48775 406 aa10.64□□□□□ -0.71
HDAC6-209ENST00000440653 METAP2P50579 478 aaKnown RBP eCLIP10.64□□□□□ -0.71
HDAC6-209ENST00000440653 FOXD4L6Q3SYB3 417 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-209ENST00000440653 AKNAD1Q5T1N1 836 aa10.64□□□□□ -0.71
HDAC6-209ENST00000440653 FOXD4L3Q6VB84 417 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-209ENST00000440653 MOB2Q70IA6 237 aa10.64□□□□□ -0.71
HDAC6-209ENST00000440653 TTC6Q86TZ1 520 aa10.64□□□□□ -0.71
HDAC6-209ENST00000440653 FERMT3Q86UX7 667 aa10.64□□□□□ -0.71
HDAC6-209ENST00000440653 CERS3Q8IU89 383 aa10.64□□□□□ -0.71
HDAC6-209ENST00000440653 IFNL3Q8IZI9 196 aa10.64□□□□□ -0.71
HDAC6-209ENST00000440653 LEO1Q8WVC0 666 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-209ENST00000440653 WASF1Q92558 559 aa10.64□□□□□ -0.71
HDAC6-209ENST00000440653 NBPF3Q9H094 633 aa10.64□□□□□ -0.71
HDAC6-209ENST00000440653 NUP62CLQ9H1M0 184 aa10.64□□□□□ -0.71
HDAC6-209ENST00000440653 EPB41L4AQ9HCS5 686 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-209ENST00000440653 ZNRF3Q9ULT6 936 aa10.64□□□□□ -0.71
HDAC6-209ENST00000440653 NAP1L2Q9ULW6 460 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-209ENST00000440653 NSFL1CQ9UNZ2 370 aaKnown RBP10.64□□□□□ -0.71
HDAC6-209ENST00000440653 MYH2Q9UKX2 1941 aa10.64□□□□□ -0.71
HDAC6-209ENST00000440653 NEDD4P46934 1319 aa10.63□□□□□ -0.71
HDAC6-209ENST00000440653 ERICH2A1L162 156 aa10.63□□□□□ -0.71
HDAC6-209ENST00000440653 CTDNEP1O95476 244 aa10.63□□□□□ -0.71
HDAC6-209ENST00000440653 CCDC192P0DO97 292 aa10.63□□□□□ -0.71
HDAC6-209ENST00000440653 TM4SF4P48230 202 aa10.63□□□□□ -0.71
HDAC6-209ENST00000440653 MKRN3Q13064 507 aaKnown RBP10.63□□□□□ -0.71
HDAC6-209ENST00000440653 PPP2R5BQ15173 497 aa10.63□□□□□ -0.71
HDAC6-209ENST00000440653 TBC1D10BQ4KMP7 808 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-209ENST00000440653 CC2D2BQ6DHV5 1058 aa10.63□□□□□ -0.71
HDAC6-209ENST00000440653 APOA5Q6Q788 366 aa10.63□□□□□ -0.71
HDAC6-209ENST00000440653 MICALL2Q8IY33 904 aa10.63□□□□□ -0.71
HDAC6-209ENST00000440653 ARMC5Q96C12 935 aa10.63□□□□□ -0.71
HDAC6-209ENST00000440653 CHAMP1Q96JM3 812 aa10.63□□□□□ -0.71
HDAC6-209ENST00000440653 C8orf76Q96K31 380 aa10.63□□□□□ -0.71
HDAC6-209ENST00000440653 ANAPC4Q9UJX5 808 aa10.63□□□□□ -0.71
HDAC6-209ENST00000440653 MINPP1Q9UNW1 487 aa10.63□□□□□ -0.71
HDAC6-209ENST00000440653 SLC4A4Q9Y6R1 1079 aa10.63□□□□□ -0.71
HDAC6-209ENST00000440653 CDK5RAP2Q96SN8 1893 aa10.63□□□□□ -0.71
HDAC6-209ENST00000440653 MAGEB6P1A0A0J9YX57 407 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 CCDC196A0A1B0GTZ2 297 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 WTIPA6NIX2 430 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-209ENST00000440653 GSG1L2A8MUP6 293 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 H7C1D1 291 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 CTAGE5O15320 804 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 ZBTB43O43298 467 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 YEATS4O95619 227 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 BCAMP50895 628 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 RPS8P62241 208 aaKnown RBP10.62□□□□□ -0.71
HDAC6-209ENST00000440653 MAP3K11Q16584 847 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 RBM26Q5T8P6 1007 aaKnown RBP10.62□□□□□ -0.71
HDAC6-209ENST00000440653 SPTY2D1Q68D10 685 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-209ENST00000440653 SYNE3Q6ZMZ3 975 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 MFSD6Q6ZSS7 791 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 Q7L0L9 218 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.62□□□□□ -0.71
HDAC6-209ENST00000440653 TMTC2Q8N394 836 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 LCORLQ8N3X6 602 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 BICD2Q8TD16 824 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 DDX11Q96FC9 970 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 TMEM106CQ9BVX2 250 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 RBSNQ9H1K0 784 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 ARMT1Q9H993 441 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 PTPN22Q9Y2R2 807 aa10.62□□□□□ -0.71
HDAC6-209ENST00000440653 ZBTB12Q9Y330 459 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-209ENST00000440653 ASTN2O75129 1339 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-209ENST00000440653 XDHP47989 1333 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 CCDC69A6NI79 296 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 GOLGA8AA7E2F4 631 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 CYP7A1P22680 504 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 CCT2P78371 535 aaKnown RBP10.61□□□□□ -0.71
HDAC6-209ENST00000440653 CAP1Q01518 475 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 GRAPQ13588 217 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 TMEM67Q5HYA8 995 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 CCDC73Q6ZRK6 1079 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 RBM43Q6ZSC3 357 aaKnown RBP10.61□□□□□ -0.71
HDAC6-209ENST00000440653 C15orf52Q6ZUT6 534 aaKnown RBP10.61□□□□□ -0.71
HDAC6-209ENST00000440653 C3orf67Q6ZVT6 689 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 TMC4Q7Z404 712 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 FBXO33Q7Z6M2 555 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 FBXO18Q8NFZ0 1043 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 GRAPLQ8TC17 118 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-209ENST00000440653 KCNG4Q8TDN1 519 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 ESR2Q92731 530 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 DPF3Q92784 378 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 CELF1Q92879 486 aaKnown RBP10.61□□□□□ -0.71
HDAC6-209ENST00000440653 CDCA5Q96FF9 252 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 CLSTN2Q9H4D0 955 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms