RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 WASF1Q92558 559 aa15.29■□□□□ 0.04
ACTN4-204ENST00000440400 MRIQ9BWK5 157 aa15.29■□□□□ 0.04
ACTN4-204ENST00000440400 SCN9AQ15858 1988 aa15.29■□□□□ 0.04
ACTN4-204ENST00000440400 CYP2D7A0A087X1C5 515 aa15.29■□□□□ 0.04
ACTN4-204ENST00000440400 SYCE3A1L190 88 aa15.29■□□□□ 0.04
ACTN4-204ENST00000440400 YEATS4O95619 227 aa15.29■□□□□ 0.04
ACTN4-204ENST00000440400 SLC3A2P08195 630 aaKnown RBP15.29■□□□□ 0.04
ACTN4-204ENST00000440400 PLCG2P16885 1265 aa15.29■□□□□ 0.04
ACTN4-204ENST00000440400 TROAPQ12815 778 aa15.29■□□□□ 0.04
ACTN4-204ENST00000440400 CRACR2BQ8N4Y2 399 aaPredicted RBP15.29■□□□□ 0.04
ACTN4-204ENST00000440400 RBM28Q9NW13 759 aaKnown RBP15.29■□□□□ 0.04
ACTN4-204ENST00000440400 KIF28PB7ZC32 967 aa15.28■□□□□ 0.04
ACTN4-204ENST00000440400 CPLX1O14810 134 aa15.28■□□□□ 0.04
ACTN4-204ENST00000440400 FOXD4L6Q3SYB3 417 aaPredicted RBP15.28■□□□□ 0.04
ACTN4-204ENST00000440400 FOXD4L3Q6VB84 417 aaPredicted RBP15.28■□□□□ 0.04
ACTN4-204ENST00000440400 FANCBQ8NB91 859 aa15.28■□□□□ 0.04
ACTN4-204ENST00000440400 ERICH2A1L162 156 aa15.28■□□□□ 0.04
ACTN4-204ENST00000440400 MINDY4BA8MYZ0 360 aa15.28■□□□□ 0.04
ACTN4-204ENST00000440400 RTN1Q16799 776 aa15.28■□□□□ 0.04
ACTN4-204ENST00000440400 RNF214Q8ND24 703 aa15.28■□□□□ 0.04
ACTN4-204ENST00000440400 RNF26Q9BY78 433 aaPredicted RBP15.28■□□□□ 0.04
ACTN4-204ENST00000440400 TAOK2Q9UL54 1235 aa15.28■□□□□ 0.04
ACTN4-204ENST00000440400 CCDC178Q5BJE1 867 aa15.28■□□□□ 0.04
ACTN4-204ENST00000440400 USP28Q96RU2 1077 aa15.28■□□□□ 0.04
ACTN4-204ENST00000440400 UBAC1Q9BSL1 405 aa15.28■□□□□ 0.04
ACTN4-204ENST00000440400 UTRNP46939 3433 aa15.27■□□□□ 0.04
ACTN4-204ENST00000440400 MYH8P13535 1937 aa15.27■□□□□ 0.04
ACTN4-204ENST00000440400 A0A1W2PQ27 194 aa15.27■□□□□ 0.04
ACTN4-204ENST00000440400 A0A1W2PQ64 194 aa15.27■□□□□ 0.04
ACTN4-204ENST00000440400 A0A1W2PQD8 194 aa15.27■□□□□ 0.04
ACTN4-204ENST00000440400 IARSP41252 1262 aaKnown RBP15.27■□□□□ 0.04
ACTN4-204ENST00000440400 EVX2Q03828 476 aa15.27■□□□□ 0.04
ACTN4-204ENST00000440400 SSRP1Q08945 709 aaKnown RBP15.27■□□□□ 0.04
ACTN4-204ENST00000440400 RCSD1Q6JBY9 416 aa15.27■□□□□ 0.04
ACTN4-204ENST00000440400 NFXL1Q6ZNB6 911 aa15.27■□□□□ 0.04
ACTN4-204ENST00000440400 MICU3Q86XE3 530 aa15.27■□□□□ 0.04
ACTN4-204ENST00000440400 ALG1Q9BT22 464 aa15.27■□□□□ 0.04
ACTN4-204ENST00000440400 DDX19AQ9NUU7 478 aaKnown RBP15.27■□□□□ 0.04
ACTN4-204ENST00000440400 COL2A1P02458 1487 aaPredicted RBP15.27■□□□□ 0.04
ACTN4-204ENST00000440400 SYNE3Q6ZMZ3 975 aa15.27■□□□□ 0.03
ACTN4-204ENST00000440400 C16orf86Q6ZW13 317 aa15.27■□□□□ 0.03
ACTN4-204ENST00000440400 PDLIM2Q96JY6 352 aa15.27■□□□□ 0.03
ACTN4-204ENST00000440400 TSPY26PQ9H489 355 aa15.27■□□□□ 0.03
ACTN4-204ENST00000440400 FAM237AA0A1B0GTK4 181 aa15.26■□□□□ 0.03
ACTN4-204ENST00000440400 DEXIO95424 95 aa15.26■□□□□ 0.03
ACTN4-204ENST00000440400 PTMAP06454 111 aaKnown RBP15.26■□□□□ 0.03
ACTN4-204ENST00000440400 CYP2D6P10635 497 aa15.26■□□□□ 0.03
ACTN4-204ENST00000440400 PDE4BQ07343 736 aa15.26■□□□□ 0.03
ACTN4-204ENST00000440400 MYSM1Q5VVJ2 828 aa15.26■□□□□ 0.03
ACTN4-204ENST00000440400 ENGASEQ8NFI3 743 aa15.26■□□□□ 0.03
ACTN4-204ENST00000440400 CLSTN2Q9H4D0 955 aa15.26■□□□□ 0.03
ACTN4-204ENST00000440400 PRPF3O43395 683 aaKnown RBP15.26■□□□□ 0.03
ACTN4-204ENST00000440400 LIG1P18858 919 aa15.26■□□□□ 0.03
ACTN4-204ENST00000440400 BTDP43251 543 aa15.26■□□□□ 0.03
ACTN4-204ENST00000440400 DIXDC1Q155Q3 683 aa15.26■□□□□ 0.03
ACTN4-204ENST00000440400 KRT40Q6A162 431 aa15.26■□□□□ 0.03
ACTN4-204ENST00000440400 DGKHQ86XP1 1220 aa15.26■□□□□ 0.03
ACTN4-204ENST00000440400 LINC00301Q8NCQ3 95 aa15.26■□□□□ 0.03
ACTN4-204ENST00000440400 FLT1P17948 1338 aa15.26■□□□□ 0.03
ACTN4-204ENST00000440400 MYO3BQ8WXR4 1341 aa15.26■□□□□ 0.03
ACTN4-204ENST00000440400 EZH2Q15910 746 aaKnown RBP15.26■□□□□ 0.03
ACTN4-204ENST00000440400 IQCA1Q86XH1 822 aa15.26■□□□□ 0.03
ACTN4-204ENST00000440400 MMP1P03956 469 aa15.25■□□□□ 0.03
ACTN4-204ENST00000440400 UVSSAQ2YD98 709 aa15.25■□□□□ 0.03
ACTN4-204ENST00000440400 HS1BP3Q53T59 392 aa15.25■□□□□ 0.03
ACTN4-204ENST00000440400 MFSD14BQ5SR56 506 aa15.25■□□□□ 0.03
ACTN4-204ENST00000440400 ZNF771Q7L3S4 317 aaPredicted RBP15.25■□□□□ 0.03
ACTN4-204ENST00000440400 CERS5Q8N5B7 392 aa15.25■□□□□ 0.03
ACTN4-204ENST00000440400 EYA3Q99504 573 aa15.25■□□□□ 0.03
ACTN4-204ENST00000440400 MYL10Q9BUA6 226 aa15.25■□□□□ 0.03
ACTN4-204ENST00000440400 TFIP11Q9UBB9 837 aaKnown RBP15.25■□□□□ 0.03
ACTN4-204ENST00000440400 USP17L8P0C7I0 530 aa15.25■□□□□ 0.03
ACTN4-204ENST00000440400 PKN1Q16512 942 aa15.25■□□□□ 0.03
ACTN4-204ENST00000440400 GRIPAP1Q4V328 841 aa15.25■□□□□ 0.03
ACTN4-204ENST00000440400 HHIPL2Q6UWX4 724 aa15.25■□□□□ 0.03
ACTN4-204ENST00000440400 C17orf53Q8N3J3 647 aaPredicted RBP15.25■□□□□ 0.03
ACTN4-204ENST00000440400 ZKSCAN3Q9BRR0 538 aa15.25■□□□□ 0.03
ACTN4-204ENST00000440400 SNW1Q13573 536 aaKnown RBP15.24■□□□□ 0.03
ACTN4-204ENST00000440400 RRP12Q5JTH9 1297 aaKnown RBP15.24■□□□□ 0.03
ACTN4-204ENST00000440400 TMTC3Q6ZXV5 915 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 FAM177A1Q8N128 213 aaPredicted RBP15.24■□□□□ 0.03
ACTN4-204ENST00000440400 FBXO41Q8TF61 875 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 PHKBQ93100 1093 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 SHISA4Q96DD7 197 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.24■□□□□ 0.03
ACTN4-204ENST00000440400 FOXP1Q9H334 677 aaPredicted RBP15.24■□□□□ 0.03
ACTN4-204ENST00000440400 IL17RBQ9NRM6 502 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 DAGLAQ9Y4D2 1042 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 CNTNAP5Q8WYK1 1306 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 IFIT1BQ5T764 474 aaKnown RBP15.24■□□□□ 0.03
ACTN4-204ENST00000440400 DPP8Q6V1X1 898 aaPredicted RBP15.24■□□□□ 0.03
ACTN4-204ENST00000440400 RAB11FIP4Q86YS3 637 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 MYRIPQ8NFW9 859 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 KCNG4Q8TDN1 519 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 STK32BQ9NY57 414 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 RXRAP19793 462 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 PTPAQ15257 358 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 ADALQ6DHV7 355 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 PODNQ7Z5L7 613 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 C2CD5Q86YS7 1000 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms