RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 LRFN4Q6PJG9 635 aa5.27□□□□□ -1.57
HMGB3P11-201ENST00000440127 AGMOQ6ZNB7 445 aa5.27□□□□□ -1.57
HMGB3P11-201ENST00000440127 C22orf34Q6ZV56 151 aa5.27□□□□□ -1.57
HMGB3P11-201ENST00000440127 ATG4DQ86TL0 474 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P11-201ENST00000440127 CCDC84Q86UT8 332 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P11-201ENST00000440127 GAL3ST3Q96A11 431 aa5.27□□□□□ -1.57
HMGB3P11-201ENST00000440127 PEG3Q9GZU2 1588 aa5.27□□□□□ -1.57
HMGB3P11-201ENST00000440127 TNKS2Q9H2K2 1166 aa5.27□□□□□ -1.57
HMGB3P11-201ENST00000440127 RC3H2Q9HBD1 1191 aaKnown RBP5.27□□□□□ -1.57
HMGB3P11-201ENST00000440127 EIF4G1Q04637 1599 aaKnown RBP5.26□□□□□ -1.57
HMGB3P11-201ENST00000440127 SORBS3O60504 671 aa5.26□□□□□ -1.57
HMGB3P11-201ENST00000440127 NTF4P34130 210 aa5.26□□□□□ -1.57
HMGB3P11-201ENST00000440127 ETV3P41162 512 aa5.26□□□□□ -1.57
HMGB3P11-201ENST00000440127 KIR3DL1P43629 444 aa5.26□□□□□ -1.57
HMGB3P11-201ENST00000440127 DAB2P98082 770 aa5.26□□□□□ -1.57
HMGB3P11-201ENST00000440127 CCDC27Q2M243 656 aa5.26□□□□□ -1.57
HMGB3P11-201ENST00000440127 SFRP5Q5T4F7 317 aa5.26□□□□□ -1.57
HMGB3P11-201ENST00000440127 SLC23A3Q6PIS1 610 aa5.26□□□□□ -1.57
HMGB3P11-201ENST00000440127 TMC4Q7Z404 712 aa5.26□□□□□ -1.57
HMGB3P11-201ENST00000440127 MFSD4AQ8N468 514 aa5.26□□□□□ -1.57
HMGB3P11-201ENST00000440127 MIPEPQ99797 713 aa5.26□□□□□ -1.57
HMGB3P11-201ENST00000440127 PARP2Q9UGN5 583 aa5.26□□□□□ -1.57
HMGB3P11-201ENST00000440127 CD8BP10966 210 aa5.25□□□□□ -1.57
HMGB3P11-201ENST00000440127 ZNF574Q6ZN55 896 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P11-201ENST00000440127 NPAS4Q8IUM7 802 aa5.25□□□□□ -1.57
HMGB3P11-201ENST00000440127 LMCD1Q9NZU5 365 aa5.25□□□□□ -1.57
HMGB3P11-201ENST00000440127 VTI1BQ9UEU0 232 aa5.25□□□□□ -1.57
HMGB3P11-201ENST00000440127 ADAM30Q9UKF2 790 aa5.25□□□□□ -1.57
HMGB3P11-201ENST00000440127 ATAD2BQ9ULI0 1458 aa5.25□□□□□ -1.57
HMGB3P11-201ENST00000440127 CST3P01034 146 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P11-201ENST00000440127 GRK4P32298 578 aa5.24□□□□□ -1.57
HMGB3P11-201ENST00000440127 INPP5AQ14642 412 aa5.24□□□□□ -1.57
HMGB3P11-201ENST00000440127 LETMD1Q6P1Q0 360 aa5.24□□□□□ -1.57
HMGB3P11-201ENST00000440127 MPRIPQ6WCQ1 1025 aa5.24□□□□□ -1.57
HMGB3P11-201ENST00000440127 NFXL1Q6ZNB6 911 aa5.24□□□□□ -1.57
HMGB3P11-201ENST00000440127 THAP5Q7Z6K1 395 aa5.24□□□□□ -1.57
HMGB3P11-201ENST00000440127 PGRP06401 933 aa5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 ZNF865P0CJ78 1059 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 YARSP54577 528 aaKnown RBP5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 CHMP4BP1P59074 171 aa5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 RPL6Q02878 288 aaKnown RBP5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 ZP2Q05996 745 aa5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 BNIP3Q12983 259 aa5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 SEPT6Q14141 434 aa5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 MLECQ14165 292 aa5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 MAP3K11Q16584 847 aa5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 RASIP1Q5U651 963 aa5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 SLC6A19Q695T7 634 aa5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 SPRED2Q7Z698 418 aa5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 SPACA3Q8IXA5 215 aa5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 MRPL41Q8IXM3 137 aaKnown RBP5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 HEXIM2Q96MH2 286 aaKnown RBP5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 FAM53CQ9NYF3 392 aa5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 BAZ1BQ9UIG0 1483 aaKnown RBP5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 PITPNM2Q9BZ72 1349 aa5.23□□□□□ -1.57
HMGB3P11-201ENST00000440127 EOMESO95936 686 aa5.22□□□□□ -1.57
HMGB3P11-201ENST00000440127 SLBPQ14493 270 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB3P11-201ENST00000440127 PKN1Q16512 942 aa5.22□□□□□ -1.57
HMGB3P11-201ENST00000440127 ZNF326Q5BKZ1 582 aaKnown RBP5.22□□□□□ -1.57
HMGB3P11-201ENST00000440127 LCE1DQ5T752 114 aa5.22□□□□□ -1.57
HMGB3P11-201ENST00000440127 PRAMEF13Q5VWM6 474 aa5.22□□□□□ -1.57
HMGB3P11-201ENST00000440127 DNAJC14Q6Y2X3 702 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P11-201ENST00000440127 RELL1Q8IUW5 271 aa5.22□□□□□ -1.57
HMGB3P11-201ENST00000440127 FLAD1Q8NFF5 587 aa5.22□□□□□ -1.57
HMGB3P11-201ENST00000440127 PIWIL2Q8TC59 973 aaKnown RBP5.22□□□□□ -1.57
HMGB3P11-201ENST00000440127 PLAGL2Q9UPG8 496 aa5.22□□□□□ -1.57
HMGB3P11-201ENST00000440127 ABCC8Q09428 1581 aa5.21□□□□□ -1.57
HMGB3P11-201ENST00000440127 USP31Q70CQ4 1352 aa5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 SLITRK5O94991 958 aa5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 RNASE1P07998 156 aaKnown RBP5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 AFMP43652 599 aa5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 LMNB2Q03252 620 aa5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 MEI1Q5TIA1 1274 aa5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 FAM214BQ7L5A3 538 aa5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 POU5F2Q8N7G0 328 aa5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 TMEM40Q8WWA1 233 aa5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 FAM168AQ92567 244 aa5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 ZNF428Q96B54 188 aa5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 SYTL4Q96C24 671 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 TMEM87BQ96K49 555 aa5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 TRIT1Q9H3H1 467 aaKnown RBP5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 FBRSQ9HAH7 460 aa5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 MBNL3Q9NUK0 354 aaKnown RBP5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 KCNH3Q9ULD8 1083 aa5.21□□□□□ -1.58
HMGB3P11-201ENST00000440127 GFRA2O00451 464 aa5.2□□□□□ -1.58
HMGB3P11-201ENST00000440127 PAPLNO95428 1278 aa5.2□□□□□ -1.58
HMGB3P11-201ENST00000440127 RAC2P15153 192 aa5.2□□□□□ -1.58
HMGB3P11-201ENST00000440127 TFE3P19532 575 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P11-201ENST00000440127 PTPN11Q06124 597 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P11-201ENST00000440127 NKPD1Q17RQ9 610 aa5.2□□□□□ -1.58
HMGB3P11-201ENST00000440127 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P11-201ENST00000440127 TMPRSS7Q7RTY8 843 aa5.2□□□□□ -1.58
HMGB3P11-201ENST00000440127 UBE3DQ7Z6J8 389 aa5.2□□□□□ -1.58
HMGB3P11-201ENST00000440127 FBXO33Q7Z6M2 555 aa5.2□□□□□ -1.58
HMGB3P11-201ENST00000440127 LRRN4CLQ8ND94 238 aa5.2□□□□□ -1.58
HMGB3P11-201ENST00000440127 PHC3Q8NDX5 983 aa5.2□□□□□ -1.58
HMGB3P11-201ENST00000440127 SLC38A3Q99624 504 aa5.2□□□□□ -1.58
HMGB3P11-201ENST00000440127 EEA1Q15075 1411 aa5.2□□□□□ -1.58
HMGB3P11-201ENST00000440127 KCNMB1Q16558 191 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms