RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 SAP30BPQ9UHR5 308 aaKnown RBP17.44■□□□□ 0.38
LINC00163-202ENST00000439088 MYH15Q9Y2K3 1946 aa17.44■□□□□ 0.38
LINC00163-202ENST00000439088 CDK5RAP2Q96SN8 1893 aa17.44■□□□□ 0.38
LINC00163-202ENST00000439088 KIF23Q02241 960 aaPredicted RBP17.44■□□□□ 0.38
LINC00163-202ENST00000439088 SLC4A8Q2Y0W8 1093 aa17.44■□□□□ 0.38
LINC00163-202ENST00000439088 GRIPAP1Q4V328 841 aa17.44■□□□□ 0.38
LINC00163-202ENST00000439088 DGKHQ86XP1 1220 aa17.44■□□□□ 0.38
LINC00163-202ENST00000439088 ZNF444Q8N0Y2 327 aaPredicted RBP17.44■□□□□ 0.38
LINC00163-202ENST00000439088 ANKS1AQ92625 1134 aa17.44■□□□□ 0.38
LINC00163-202ENST00000439088 USP28Q96RU2 1077 aa17.44■□□□□ 0.38
LINC00163-202ENST00000439088 MRIQ9BWK5 157 aa17.44■□□□□ 0.38
LINC00163-202ENST00000439088 TCP11L1Q9NUJ3 509 aa17.44■□□□□ 0.38
LINC00163-202ENST00000439088 ZNF219Q9P2Y4 722 aaPredicted RBP17.44■□□□□ 0.38
LINC00163-202ENST00000439088 F8W031 263 aaPredicted RBP17.43■□□□□ 0.38
LINC00163-202ENST00000439088 NMT2O60551 498 aa17.43■□□□□ 0.38
LINC00163-202ENST00000439088 DEXIO95424 95 aa17.43■□□□□ 0.38
LINC00163-202ENST00000439088 TPRNQ4KMQ1 711 aa17.43■□□□□ 0.38
LINC00163-202ENST00000439088 STRIP1Q5VSL9 837 aa17.43■□□□□ 0.38
LINC00163-202ENST00000439088 SUPT20HQ8NEM7 779 aa17.43■□□□□ 0.38
LINC00163-202ENST00000439088 MXD3Q9BW11 206 aa17.43■□□□□ 0.38
LINC00163-202ENST00000439088 C10orf71Q711Q0 1435 aa17.43■□□□□ 0.38
LINC00163-202ENST00000439088 RCSD1Q6JBY9 416 aa17.42■□□□□ 0.38
LINC00163-202ENST00000439088 PGBD1Q96JS3 809 aa17.42■□□□□ 0.38
LINC00163-202ENST00000439088 RTEL1Q9NZ71 1219 aa17.42■□□□□ 0.38
LINC00163-202ENST00000439088 C16orf86Q6ZW13 317 aa17.42■□□□□ 0.38
LINC00163-202ENST00000439088 CCDC125Q86Z20 511 aa17.42■□□□□ 0.38
LINC00163-202ENST00000439088 RNF26Q9BY78 433 aaPredicted RBP17.42■□□□□ 0.38
LINC00163-202ENST00000439088 IL17RBQ9NRM6 502 aa17.42■□□□□ 0.38
LINC00163-202ENST00000439088 SNED1Q8TER0 1413 aa17.42■□□□□ 0.38
LINC00163-202ENST00000439088 KIF28PB7ZC32 967 aa17.41■□□□□ 0.38
LINC00163-202ENST00000439088 ECE2O60344 883 aa17.41■□□□□ 0.38
LINC00163-202ENST00000439088 CEBPZQ03701 1054 aaKnown RBP17.41■□□□□ 0.38
LINC00163-202ENST00000439088 KIAA2012Q0VF49 1180 aa17.41■□□□□ 0.38
LINC00163-202ENST00000439088 MYSM1Q5VVJ2 828 aa17.41■□□□□ 0.38
LINC00163-202ENST00000439088 TEKT1Q969V4 418 aa17.41■□□□□ 0.38
LINC00163-202ENST00000439088 KCNQ5Q9NR82 932 aa17.41■□□□□ 0.38
LINC00163-202ENST00000439088 TSPY3P0CV98 308 aa17.41■□□□□ 0.38
LINC00163-202ENST00000439088 TSPY8P0CW00 308 aa17.41■□□□□ 0.38
LINC00163-202ENST00000439088 GUCY1A2P33402 732 aa17.41■□□□□ 0.38
LINC00163-202ENST00000439088 CDK8P49336 464 aa17.41■□□□□ 0.38
LINC00163-202ENST00000439088 FUT2Q10981 343 aa17.41■□□□□ 0.38
LINC00163-202ENST00000439088 CMTR1Q8N1G2 835 aaKnown RBP17.41■□□□□ 0.38
LINC00163-202ENST00000439088 CCDC82Q8N4S0 544 aa17.41■□□□□ 0.38
LINC00163-202ENST00000439088 TTLL6Q8N841 843 aa17.41■□□□□ 0.38
LINC00163-202ENST00000439088 DDX60LQ5H9U9 1706 aaKnown RBP17.4■□□□□ 0.38
LINC00163-202ENST00000439088 UBE2Q2LH0YL09 131 aa17.4■□□□□ 0.38
LINC00163-202ENST00000439088 PRPF3O43395 683 aaKnown RBP17.4■□□□□ 0.38
LINC00163-202ENST00000439088 RASA1P20936 1047 aa17.4■□□□□ 0.38
LINC00163-202ENST00000439088 U2AF2P26368 475 aaKnown RBP eCLIP17.4■□□□□ 0.38
LINC00163-202ENST00000439088 SCNN1DP51172 638 aa17.4■□□□□ 0.38
LINC00163-202ENST00000439088 DACT2Q5SW24 774 aa17.4■□□□□ 0.38
LINC00163-202ENST00000439088 USP40Q9NVE5 1235 aa17.4■□□□□ 0.38
LINC00163-202ENST00000439088 POLR3EQ9NVU0 708 aa17.4■□□□□ 0.38
LINC00163-202ENST00000439088 USP17L3A6NCW0 530 aa17.39■□□□□ 0.38
LINC00163-202ENST00000439088 USP17L4A6NCW7 530 aa17.39■□□□□ 0.38
LINC00163-202ENST00000439088 C21orf2O43822 256 aa17.39■□□□□ 0.38
LINC00163-202ENST00000439088 LIG1P18858 919 aa17.39■□□□□ 0.38
LINC00163-202ENST00000439088 HDLBPQ00341 1268 aaKnown RBP17.39■□□□□ 0.38
LINC00163-202ENST00000439088 AKAP17AQ02040 695 aaKnown RBP17.39■□□□□ 0.38
LINC00163-202ENST00000439088 USP17L1Q7RTZ2 530 aa17.39■□□□□ 0.38
LINC00163-202ENST00000439088 SLC44A5Q8NCS7 719 aa17.39■□□□□ 0.38
LINC00163-202ENST00000439088 CTCFLQ8NI51 663 aaPredicted RBP17.39■□□□□ 0.38
LINC00163-202ENST00000439088 MAP3K14Q99558 947 aa17.39■□□□□ 0.38
LINC00163-202ENST00000439088 FTOQ9C0B1 505 aaKnown RBP eCLIP17.39■□□□□ 0.38
LINC00163-202ENST00000439088 KAT14Q9H8E8 782 aa17.39■□□□□ 0.38
LINC00163-202ENST00000439088 FOCADQ5VW36 1801 aa17.39■□□□□ 0.37
LINC00163-202ENST00000439088 ECM29Q5VYK3 1845 aa17.39■□□□□ 0.37
LINC00163-202ENST00000439088 WDHD1O75717 1129 aaPredicted RBP17.39■□□□□ 0.37
LINC00163-202ENST00000439088 AOC3Q16853 763 aa17.39■□□□□ 0.37
LINC00163-202ENST00000439088 APOBEC3HQ6NTF7 200 aaKnown RBP17.39■□□□□ 0.37
LINC00163-202ENST00000439088 TMTC3Q6ZXV5 915 aa17.39■□□□□ 0.37
LINC00163-202ENST00000439088 ZDHHC15Q96MV8 337 aa17.39■□□□□ 0.37
LINC00163-202ENST00000439088 MYH1P12882 1939 aa17.39■□□□□ 0.37
LINC00163-202ENST00000439088 YEATS4O95619 227 aa17.38■□□□□ 0.37
LINC00163-202ENST00000439088 MMP1P03956 469 aa17.38■□□□□ 0.37
LINC00163-202ENST00000439088 CRKP46108 304 aa17.38■□□□□ 0.37
LINC00163-202ENST00000439088 GNL2Q13823 731 aaKnown RBP17.38■□□□□ 0.37
LINC00163-202ENST00000439088 SAFBQ15424 915 aaKnown RBP eCLIP17.38■□□□□ 0.37
LINC00163-202ENST00000439088 CDC42EP5Q6NZY7 148 aa17.38■□□□□ 0.37
LINC00163-202ENST00000439088 RTKN2Q8IZC4 609 aa17.38■□□□□ 0.37
LINC00163-202ENST00000439088 LINC00301Q8NCQ3 95 aa17.38■□□□□ 0.37
LINC00163-202ENST00000439088 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.38■□□□□ 0.37
LINC00163-202ENST00000439088 RBSNQ9H1K0 784 aa17.38■□□□□ 0.37
LINC00163-202ENST00000439088 TSPY26PQ9H489 355 aa17.38■□□□□ 0.37
LINC00163-202ENST00000439088 PLEKHA8P1O95397 391 aa17.38■□□□□ 0.37
LINC00163-202ENST00000439088 KIF5BP33176 963 aa17.38■□□□□ 0.37
LINC00163-202ENST00000439088 NASPP49321 788 aaPredicted RBP17.38■□□□□ 0.37
LINC00163-202ENST00000439088 NEDD1Q8NHV4 660 aa17.38■□□□□ 0.37
LINC00163-202ENST00000439088 BICD2Q8TD16 824 aa17.38■□□□□ 0.37
LINC00163-202ENST00000439088 CLIC4Q9Y696 253 aa17.38■□□□□ 0.37
LINC00163-202ENST00000439088 KCNA3P22001 575 aa17.37■□□□□ 0.37
LINC00163-202ENST00000439088 PICALMQ13492 652 aa17.37■□□□□ 0.37
LINC00163-202ENST00000439088 PKN1Q16512 942 aa17.37■□□□□ 0.37
LINC00163-202ENST00000439088 CCDC93Q567U6 631 aa17.37■□□□□ 0.37
LINC00163-202ENST00000439088 KCNG4Q8TDN1 519 aa17.37■□□□□ 0.37
LINC00163-202ENST00000439088 DDX19AQ9NUU7 478 aaKnown RBP17.37■□□□□ 0.37
LINC00163-202ENST00000439088 V9GY48 417 aaPredicted RBP17.37■□□□□ 0.37
LINC00163-202ENST00000439088 DPEP1P16444 411 aa17.36■□□□□ 0.37
LINC00163-202ENST00000439088 XBP1P17861 261 aa17.36■□□□□ 0.37
LINC00163-202ENST00000439088 STK38Q15208 465 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms