RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 TATDN1Q6P1N9 297 aa19.28■□□□□ 0.68
SNRPB-202ENST00000438552 C16orf86Q6ZW13 317 aa19.28■□□□□ 0.68
SNRPB-202ENST00000438552 ERO1BQ86YB8 467 aa19.28■□□□□ 0.68
SNRPB-202ENST00000438552 PTPRAP18433 802 aa19.27■□□□□ 0.68
SNRPB-202ENST00000438552 KIF23Q02241 960 aaPredicted RBP19.27■□□□□ 0.68
SNRPB-202ENST00000438552 SWAP70Q9UH65 585 aa19.27■□□□□ 0.68
SNRPB-202ENST00000438552 ZBTB21Q9ULJ3 1066 aa19.27■□□□□ 0.68
SNRPB-202ENST00000438552 LOC285556D6RIA3 1793 aa19.27■□□□□ 0.67
SNRPB-202ENST00000438552 ZMYM6O95789 1325 aa19.26■□□□□ 0.67
SNRPB-202ENST00000438552 SGSM2O43147 1006 aa19.26■□□□□ 0.67
SNRPB-202ENST00000438552 CDK8P49336 464 aa19.26■□□□□ 0.67
SNRPB-202ENST00000438552 PPARAQ07869 468 aa19.26■□□□□ 0.67
SNRPB-202ENST00000438552 PPIL2Q13356 520 aa19.26■□□□□ 0.67
SNRPB-202ENST00000438552 ALX1Q15699 326 aa19.26■□□□□ 0.67
SNRPB-202ENST00000438552 CERKLQ49MI3 558 aaPredicted RBP19.26■□□□□ 0.67
SNRPB-202ENST00000438552 JMYQ8N9B5 988 aa19.26■□□□□ 0.67
SNRPB-202ENST00000438552 IRF6O14896 467 aa19.25■□□□□ 0.67
SNRPB-202ENST00000438552 CDC45O75419 566 aa19.25■□□□□ 0.67
SNRPB-202ENST00000438552 GH2P01242 217 aa19.25■□□□□ 0.67
SNRPB-202ENST00000438552 FGAP02671 866 aa19.25■□□□□ 0.67
SNRPB-202ENST00000438552 MAP2K2P36507 400 aa19.25■□□□□ 0.67
SNRPB-202ENST00000438552 PPATQ06203 517 aa19.25■□□□□ 0.67
SNRPB-202ENST00000438552 ASNSP08243 561 aa19.24■□□□□ 0.67
SNRPB-202ENST00000438552 CTDSPL2Q05D32 466 aa19.24■□□□□ 0.67
SNRPB-202ENST00000438552 ABCB5Q2M3G0 1257 aa19.24■□□□□ 0.67
SNRPB-202ENST00000438552 ESYT1Q9BSJ8 1104 aa19.24■□□□□ 0.67
SNRPB-202ENST00000438552 DSCC1Q9BVC3 393 aa19.24■□□□□ 0.67
SNRPB-202ENST00000438552 TAOK2Q9UL54 1235 aa19.24■□□□□ 0.67
SNRPB-202ENST00000438552 ZHX2Q9Y6X8 837 aa19.24■□□□□ 0.67
SNRPB-202ENST00000438552 MPHOSPH10O00566 681 aaKnown RBP19.23■□□□□ 0.67
SNRPB-202ENST00000438552 PRDM1O75626 825 aa19.23■□□□□ 0.67
SNRPB-202ENST00000438552 AKR1B1P15121 316 aa19.23■□□□□ 0.67
SNRPB-202ENST00000438552 HAND2P61296 217 aa19.23■□□□□ 0.67
SNRPB-202ENST00000438552 PTH1RQ03431 593 aa19.23■□□□□ 0.67
SNRPB-202ENST00000438552 MANSC4A6NHS7 340 aaPredicted RBP19.22■□□□□ 0.67
SNRPB-202ENST00000438552 TRIM75PA6NK02 468 aa19.22■□□□□ 0.67
SNRPB-202ENST00000438552 USP17L5A8MUK1 530 aa19.22■□□□□ 0.67
SNRPB-202ENST00000438552 RASA1P20936 1047 aa19.22■□□□□ 0.67
SNRPB-202ENST00000438552 MS4A4AQ96JQ5 239 aa19.22■□□□□ 0.67
SNRPB-202ENST00000438552 NBPF3Q9H094 633 aa19.22■□□□□ 0.67
SNRPB-202ENST00000438552 MKNK2Q9HBH9 465 aa19.22■□□□□ 0.67
SNRPB-202ENST00000438552 ANAPC4Q9UJX5 808 aa19.22■□□□□ 0.67
SNRPB-202ENST00000438552 KCNH4Q9UQ05 1017 aa19.22■□□□□ 0.67
SNRPB-202ENST00000438552 AFG3L2Q9Y4W6 797 aa19.22■□□□□ 0.67
SNRPB-202ENST00000438552 GTF3C3Q9Y5Q9 886 aa19.22■□□□□ 0.67
SNRPB-202ENST00000438552 TACC3Q9Y6A5 838 aa19.22■□□□□ 0.67
SNRPB-202ENST00000438552 CCL15-CCL14A0A0B4J2E2 113 aa19.21■□□□□ 0.67
SNRPB-202ENST00000438552 SLC3A2P08195 630 aaKnown RBP19.21■□□□□ 0.67
SNRPB-202ENST00000438552 GUCY1A2P33402 732 aa19.21■□□□□ 0.67
SNRPB-202ENST00000438552 GTF2A2P52657 109 aa19.21■□□□□ 0.67
SNRPB-202ENST00000438552 SREBF2Q12772 1141 aa19.21■□□□□ 0.67
SNRPB-202ENST00000438552 SNAPC2Q13487 334 aa19.21■□□□□ 0.67
SNRPB-202ENST00000438552 SEPT2Q15019 361 aa19.21■□□□□ 0.67
SNRPB-202ENST00000438552 RAB3GAP1Q15042 981 aa19.21■□□□□ 0.67
SNRPB-202ENST00000438552 CCL15Q16663 113 aa19.21■□□□□ 0.67
SNRPB-202ENST00000438552 CASC1Q6TDU7 716 aa19.21■□□□□ 0.67
SNRPB-202ENST00000438552 CLEC10AQ8IUN9 316 aa19.21■□□□□ 0.67
SNRPB-202ENST00000438552 BRI3BPQ8WY22 251 aa19.21■□□□□ 0.67
SNRPB-202ENST00000438552 CABP5Q9NP86 173 aa19.21■□□□□ 0.67
SNRPB-202ENST00000438552 GINM1Q9NU53 330 aa19.21■□□□□ 0.67
SNRPB-202ENST00000438552 MYH4Q9Y623 1939 aa19.21■□□□□ 0.67
SNRPB-202ENST00000438552 TBC1D10CQ8IV04 446 aa19.2■□□□□ 0.66
SNRPB-202ENST00000438552 AS3MTQ9HBK9 375 aa19.2■□□□□ 0.66
SNRPB-202ENST00000438552 INCENPQ9NQS7 918 aa19.2■□□□□ 0.66
SNRPB-202ENST00000438552 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.2■□□□□ 0.661e-11■■□□□ 12.6
SNRPB-202ENST00000438552 IGF2BP3O00425 579 aaKnown RBP eCLIP19.19■□□□□ 0.66
SNRPB-202ENST00000438552 MAP2K1Q02750 393 aaPredicted RBP19.19■□□□□ 0.66
SNRPB-202ENST00000438552 PDE4BQ07343 736 aa19.19■□□□□ 0.66
SNRPB-202ENST00000438552 SPP2Q13103 211 aa19.19■□□□□ 0.66
SNRPB-202ENST00000438552 TMEM179Q6ZVK1 233 aa19.19■□□□□ 0.66
SNRPB-202ENST00000438552 ZNF280CQ8ND82 737 aa19.19■□□□□ 0.66
SNRPB-202ENST00000438552 CCDC17Q96LX7 622 aa19.19■□□□□ 0.66
SNRPB-202ENST00000438552 A0A0G2JLL6 359 aaPredicted RBP19.18■□□□□ 0.66
SNRPB-202ENST00000438552 CETPP11597 493 aa19.18■□□□□ 0.66
SNRPB-202ENST00000438552 TM4SF4P48230 202 aa19.18■□□□□ 0.66
SNRPB-202ENST00000438552 DGKZQ13574 1117 aa19.18■□□□□ 0.66
SNRPB-202ENST00000438552 MTMR2Q13614 643 aa19.18■□□□□ 0.66
SNRPB-202ENST00000438552 PRRT2Q7Z6L0 340 aaPredicted RBP19.18■□□□□ 0.66
SNRPB-202ENST00000438552 PTPN18Q99952 460 aa19.18■□□□□ 0.66
SNRPB-202ENST00000438552 WDR18Q9BV38 432 aa19.18■□□□□ 0.66
SNRPB-202ENST00000438552 TBC1D2Q9BYX2 928 aa19.18■□□□□ 0.66
SNRPB-202ENST00000438552 LSG1Q9H089 658 aaKnown RBP19.18■□□□□ 0.66
SNRPB-202ENST00000438552 ZNF287Q9HBT7 754 aa19.18■□□□□ 0.66
SNRPB-202ENST00000438552 ANO2Q9NQ90 1003 aa19.18■□□□□ 0.66
SNRPB-202ENST00000438552 WBP1LQ9NX94 342 aa19.18■□□□□ 0.66
SNRPB-202ENST00000438552 TESPA1A2RU30 521 aaPredicted RBP19.17■□□□□ 0.66
SNRPB-202ENST00000438552 CXCL11O14625 94 aa19.17■□□□□ 0.66
SNRPB-202ENST00000438552 ZNF213O14771 459 aa19.17■□□□□ 0.66
SNRPB-202ENST00000438552 HSPA1AP0DMV8 641 aaKnown RBP19.17■□□□□ 0.66
SNRPB-202ENST00000438552 HSPA1BP0DMV9 641 aaKnown RBP19.17■□□□□ 0.66
SNRPB-202ENST00000438552 MOGSQ13724 837 aa19.17■□□□□ 0.66
SNRPB-202ENST00000438552 IMMTQ16891 758 aaKnown RBP19.17■□□□□ 0.66
SNRPB-202ENST00000438552 FAM47AQ5JRC9 791 aa19.17■□□□□ 0.66
SNRPB-202ENST00000438552 GADL1Q6ZQY3 521 aa19.17■□□□□ 0.66
SNRPB-202ENST00000438552 KIAA1211Q6ZU35 1233 aa19.17■□□□□ 0.66
SNRPB-202ENST00000438552 IFNL1Q8IU54 200 aa19.17■□□□□ 0.66
SNRPB-202ENST00000438552 REM2Q8IYK8 340 aaPredicted RBP19.17■□□□□ 0.66
SNRPB-202ENST00000438552 STAG1Q8WVM7 1258 aa19.17■□□□□ 0.66
SNRPB-202ENST00000438552 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.17■□□□□ 0.66
SNRPB-202ENST00000438552 TOMM22Q9NS69 142 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms