RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 CERS5Q8N5B7 392 aa17.85■□□□□ 0.45
SGCE-205ENST00000437425 NUP133Q8WUM0 1156 aa17.85■□□□□ 0.45
SGCE-205ENST00000437425 LEO1Q8WVC0 666 aaPredicted RBP17.85■□□□□ 0.45
SGCE-205ENST00000437425 MYO3BQ8WXR4 1341 aa17.84■□□□□ 0.45
SGCE-205ENST00000437425 DTNBO60941 627 aa17.84■□□□□ 0.45
SGCE-205ENST00000437425 GADD45BO75293 160 aaPredicted RBP17.84■□□□□ 0.45
SGCE-205ENST00000437425 RXRAP19793 462 aa17.84■□□□□ 0.45
SGCE-205ENST00000437425 TFAP4Q01664 338 aa17.84■□□□□ 0.45
SGCE-205ENST00000437425 SAFBQ15424 915 aaKnown RBP eCLIP17.84■□□□□ 0.45
SGCE-205ENST00000437425 RAB11FIP4Q86YS3 637 aa17.84■□□□□ 0.45
SGCE-205ENST00000437425 CTCFLQ8NI51 663 aaPredicted RBP17.84■□□□□ 0.45
SGCE-205ENST00000437425 ZDHHC15Q96MV8 337 aa17.84■□□□□ 0.45
SGCE-205ENST00000437425 SLC26A6Q9BXS9 759 aa17.84■□□□□ 0.45
SGCE-205ENST00000437425 RCOR1Q9UKL0 485 aa17.84■□□□□ 0.45
SGCE-205ENST00000437425 DDX60LQ5H9U9 1706 aaKnown RBP17.84■□□□□ 0.45
SGCE-205ENST00000437425 FOCADQ5VW36 1801 aa17.84■□□□□ 0.45
SGCE-205ENST00000437425 NPM3O75607 178 aaKnown RBP17.83■□□□□ 0.45
SGCE-205ENST00000437425 TSPY3P0CV98 308 aa17.83■□□□□ 0.45
SGCE-205ENST00000437425 TSPY8P0CW00 308 aa17.83■□□□□ 0.45
SGCE-205ENST00000437425 POLD1P28340 1107 aa17.83■□□□□ 0.45
SGCE-205ENST00000437425 GNAQP50148 359 aa17.83■□□□□ 0.45
SGCE-205ENST00000437425 TROAPQ12815 778 aa17.83■□□□□ 0.45
SGCE-205ENST00000437425 DACT2Q5SW24 774 aa17.83■□□□□ 0.45
SGCE-205ENST00000437425 CCDC144CPQ8IYA2 1237 aa17.83■□□□□ 0.45
SGCE-205ENST00000437425 MYL10Q9BUA6 226 aa17.83■□□□□ 0.45
SGCE-205ENST00000437425 KAT14Q9H8E8 782 aa17.83■□□□□ 0.45
SGCE-205ENST00000437425 DBNDD1Q9H9R9 158 aa17.83■□□□□ 0.45
SGCE-205ENST00000437425 TMEM63CQ9P1W3 806 aa17.83■□□□□ 0.45
SGCE-205ENST00000437425 SWAP70Q9UH65 585 aa17.83■□□□□ 0.45
SGCE-205ENST00000437425 SERPINA10Q9UK55 444 aa17.83■□□□□ 0.45
SGCE-205ENST00000437425 KIF13BQ9NQT8 1826 aa17.83■□□□□ 0.44
SGCE-205ENST00000437425 PPP4R3BQ5MIZ7 849 aa17.82■□□□□ 0.44
SGCE-205ENST00000437425 PHKBQ93100 1093 aa17.82■□□□□ 0.44
SGCE-205ENST00000437425 CDK5RAP2Q96SN8 1893 aa17.82■□□□□ 0.44
SGCE-205ENST00000437425 PSDA5PKW4 1024 aaPredicted RBP17.82■□□□□ 0.44
SGCE-205ENST00000437425 PRPF3O43395 683 aaKnown RBP17.82■□□□□ 0.44
SGCE-205ENST00000437425 YEATS4O95619 227 aa17.82■□□□□ 0.44
SGCE-205ENST00000437425 CRKP46108 304 aa17.82■□□□□ 0.44
SGCE-205ENST00000437425 PLCD1P51178 756 aa17.82■□□□□ 0.44
SGCE-205ENST00000437425 KIF23Q02241 960 aaPredicted RBP17.82■□□□□ 0.44
SGCE-205ENST00000437425 KRT40Q6A162 431 aa17.82■□□□□ 0.44
SGCE-205ENST00000437425 LRSAM1Q6UWE0 723 aa17.82■□□□□ 0.44
SGCE-205ENST00000437425 NBPF11Q86T75 865 aa17.82■□□□□ 0.44
SGCE-205ENST00000437425 MTFR1LQ9H019 292 aa17.82■□□□□ 0.44
SGCE-205ENST00000437425 USP40Q9NVE5 1235 aa17.82■□□□□ 0.44
SGCE-205ENST00000437425 RTEL1Q9NZ71 1219 aa17.82■□□□□ 0.44
SGCE-205ENST00000437425 MYH15Q9Y2K3 1946 aa17.81■□□□□ 0.44
SGCE-205ENST00000437425 PPIP5K2O43314 1243 aa17.81■□□□□ 0.44
SGCE-205ENST00000437425 CDK8P49336 464 aa17.81■□□□□ 0.44
SGCE-205ENST00000437425 GUCY1B3Q02153 619 aa17.81■□□□□ 0.44
SGCE-205ENST00000437425 GNL2Q13823 731 aaKnown RBP17.81■□□□□ 0.44
SGCE-205ENST00000437425 FAM47AQ5JRC9 791 aa17.81■□□□□ 0.44
SGCE-205ENST00000437425 FAM173BQ6P4H8 233 aa17.81■□□□□ 0.44
SGCE-205ENST00000437425 FAM177A1Q8N128 213 aaPredicted RBP17.81■□□□□ 0.44
SGCE-205ENST00000437425 NEDD1Q8NHV4 660 aa17.81■□□□□ 0.44
SGCE-205ENST00000437425 KCNG4Q8TDN1 519 aa17.81■□□□□ 0.44
SGCE-205ENST00000437425 GRPEL1Q9HAV7 217 aa17.81■□□□□ 0.44
SGCE-205ENST00000437425 POLR3EQ9NVU0 708 aa17.81■□□□□ 0.44
SGCE-205ENST00000437425 TFIP11Q9UBB9 837 aaKnown RBP17.81■□□□□ 0.44
SGCE-205ENST00000437425 SAP30BPQ9UHR5 308 aaKnown RBP17.81■□□□□ 0.44
SGCE-205ENST00000437425 F8W031 263 aaPredicted RBP17.8■□□□□ 0.44
SGCE-205ENST00000437425 SMIM22K7EJ46 135 aa17.8■□□□□ 0.44
SGCE-205ENST00000437425 C21orf2O43822 256 aa17.8■□□□□ 0.44
SGCE-205ENST00000437425 HLA-DOAP06340 250 aa17.8■□□□□ 0.44
SGCE-205ENST00000437425 RASA1P20936 1047 aa17.8■□□□□ 0.44
SGCE-205ENST00000437425 U2AF2P26368 475 aaKnown RBP eCLIP17.8■□□□□ 0.444e-7■■□□□ 11.5
SGCE-205ENST00000437425 AOC3Q16853 763 aa17.8■□□□□ 0.44
SGCE-205ENST00000437425 MYSM1Q5VVJ2 828 aa17.8■□□□□ 0.44
SGCE-205ENST00000437425 TMTC3Q6ZXV5 915 aa17.8■□□□□ 0.44
SGCE-205ENST00000437425 LZTS2Q9BRK4 669 aa17.8■□□□□ 0.44
SGCE-205ENST00000437425 DHX36Q9H2U1 1008 aaKnown RBP17.8■□□□□ 0.44
SGCE-205ENST00000437425 MYH1P12882 1939 aa17.79■□□□□ 0.44
SGCE-205ENST00000437425 PLIN4Q96Q06 1357 aa17.79■□□□□ 0.44
SGCE-205ENST00000437425 WDHD1O75717 1129 aaPredicted RBP17.79■□□□□ 0.44
SGCE-205ENST00000437425 FOSBP53539 338 aa17.79■□□□□ 0.44
SGCE-205ENST00000437425 RCSD1Q6JBY9 416 aa17.79■□□□□ 0.44
SGCE-205ENST00000437425 APOBEC3HQ6NTF7 200 aaKnown RBP17.79■□□□□ 0.44
SGCE-205ENST00000437425 DYNLL2Q96FJ2 89 aa17.79■□□□□ 0.44
SGCE-205ENST00000437425 EHD4Q9H223 541 aa17.79■□□□□ 0.44
SGCE-205ENST00000437425 FOXP1Q9H334 677 aaPredicted RBP17.79■□□□□ 0.44
SGCE-205ENST00000437425 DDX19AQ9NUU7 478 aaKnown RBP17.79■□□□□ 0.44
SGCE-205ENST00000437425 PIM2Q9P1W9 311 aa17.79■□□□□ 0.44
SGCE-205ENST00000437425 MMP1P03956 469 aa17.78■□□□□ 0.44
SGCE-205ENST00000437425 DPEP1P16444 411 aa17.78■□□□□ 0.44
SGCE-205ENST00000437425 NASPP49321 788 aaPredicted RBP17.78■□□□□ 0.44
SGCE-205ENST00000437425 MMP14P50281 582 aa17.78■□□□□ 0.44
SGCE-205ENST00000437425 CDC42EP5Q6NZY7 148 aa17.78■□□□□ 0.44
SGCE-205ENST00000437425 PNMA1Q8ND90 353 aa17.78■□□□□ 0.44
SGCE-205ENST00000437425 USP28Q96RU2 1077 aa17.78■□□□□ 0.44
SGCE-205ENST00000437425 IDI2Q9BXS1 227 aa17.78■□□□□ 0.44
SGCE-205ENST00000437425 PDGFDQ9GZP0 370 aaPredicted RBP17.78■□□□□ 0.44
SGCE-205ENST00000437425 OSBPL5Q9H0X9 879 aaPredicted RBP17.78■□□□□ 0.44
SGCE-205ENST00000437425 ZNF219Q9P2Y4 722 aaPredicted RBP17.78■□□□□ 0.44
SGCE-205ENST00000437425 KCNA3P22001 575 aa17.77■□□□□ 0.44
SGCE-205ENST00000437425 NOVP48745 357 aa17.77■□□□□ 0.44
SGCE-205ENST00000437425 GABPAQ06546 454 aa17.77■□□□□ 0.44
SGCE-205ENST00000437425 FUT2Q10981 343 aa17.77■□□□□ 0.44
SGCE-205ENST00000437425 JMYQ8N9B5 988 aa17.77■□□□□ 0.44
SGCE-205ENST00000437425 BRMS1Q9HCU9 246 aa17.77■□□□□ 0.44
SGCE-205ENST00000437425 IL17RBQ9NRM6 502 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms