RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 C16orf45Q96MC5 204 aaPredicted RBP21.39■■□□□ 1.02
CLK1-205ENST00000434813 KCNH3Q9ULD8 1083 aa21.39■■□□□ 1.02
CLK1-205ENST00000434813 MYH6P13533 1939 aa21.39■■□□□ 1.02
CLK1-205ENST00000434813 LAMB1P07942 1786 aa21.39■■□□□ 1.02
CLK1-205ENST00000434813 BAZ2AQ9UIF9 1905 aaKnown RBP21.39■■□□□ 1.01
CLK1-205ENST00000434813 WTIPA6NIX2 430 aaPredicted RBP21.39■■□□□ 1.01
CLK1-205ENST00000434813 KRBA2Q6ZNG9 492 aa21.39■■□□□ 1.01
CLK1-205ENST00000434813 FGRP09769 529 aa21.38■■□□□ 1.01
CLK1-205ENST00000434813 SKILP12757 684 aa21.38■■□□□ 1.01
CLK1-205ENST00000434813 FBXO33Q7Z6M2 555 aa21.38■■□□□ 1.01
CLK1-205ENST00000434813 METTL16Q86W50 562 aaKnown RBP21.38■■□□□ 1.01
CLK1-205ENST00000434813 NBPF5PQ86XG9 351 aaPredicted RBP21.38■■□□□ 1.01
CLK1-205ENST00000434813 ZNF384Q8TF68 577 aa21.38■■□□□ 1.01
CLK1-205ENST00000434813 ZSCAN10Q96SZ4 725 aaPredicted RBP21.38■■□□□ 1.01
CLK1-205ENST00000434813 XPO4Q9C0E2 1151 aaKnown RBP21.38■■□□□ 1.01
CLK1-205ENST00000434813 PTPREP23469 700 aa21.38■■□□□ 1.01
CLK1-205ENST00000434813 PNOCQ13519 176 aa21.38■■□□□ 1.01
CLK1-205ENST00000434813 ENAHQ8N8S7 591 aaPredicted RBP21.38■■□□□ 1.01
CLK1-205ENST00000434813 IFNKQ9P0W0 207 aa21.38■■□□□ 1.01
CLK1-205ENST00000434813 FBXO2Q9UK22 296 aaPredicted RBP21.38■■□□□ 1.01
CLK1-205ENST00000434813 SMC2O95347 1197 aa21.37■■□□□ 1.01
CLK1-205ENST00000434813 TNNT1P13805 278 aa21.37■■□□□ 1.01
CLK1-205ENST00000434813 DYNLL1P63167 89 aaKnown RBP21.37■■□□□ 1.01
CLK1-205ENST00000434813 TPD52L1Q16890 204 aaPredicted RBP21.37■■□□□ 1.01
CLK1-205ENST00000434813 LONRF3Q496Y0 759 aa21.37■■□□□ 1.01
CLK1-205ENST00000434813 CMTR1Q8N1G2 835 aaKnown RBP21.37■■□□□ 1.01
CLK1-205ENST00000434813 CNNM3Q8NE01 707 aa21.37■■□□□ 1.01
CLK1-205ENST00000434813 KCND1Q9NSA2 647 aa21.37■■□□□ 1.01
CLK1-205ENST00000434813 LRRC4BQ9NT99 713 aa21.37■■□□□ 1.01
CLK1-205ENST00000434813 TAF1LQ8IZX4 1826 aa21.37■■□□□ 1.01
CLK1-205ENST00000434813 MYH2Q9UKX2 1941 aa21.36■■□□□ 1.01
CLK1-205ENST00000434813 TRIM37O94972 964 aa21.36■■□□□ 1.01
CLK1-205ENST00000434813 DHX8Q14562 1220 aaKnown RBP21.36■■□□□ 1.01
CLK1-205ENST00000434813 CCDC82Q8N4S0 544 aa21.36■■□□□ 1.01
CLK1-205ENST00000434813 CCDC150Q8NCX0 1101 aa21.36■■□□□ 1.01
CLK1-205ENST00000434813 MORC2Q9Y6X9 1032 aaPredicted RBP21.36■■□□□ 1.01
CLK1-205ENST00000434813 SMIM22K7EJ46 135 aa21.36■■□□□ 1.01
CLK1-205ENST00000434813 NPHP1O15259 732 aa21.36■■□□□ 1.01
CLK1-205ENST00000434813 MYL5Q02045 173 aa21.36■■□□□ 1.01
CLK1-205ENST00000434813 NR5A1Q13285 461 aa21.36■■□□□ 1.01
CLK1-205ENST00000434813 SLC27A3Q5K4L6 730 aa21.36■■□□□ 1.01
CLK1-205ENST00000434813 TPTE2Q6XPS3 522 aa21.36■■□□□ 1.01
CLK1-205ENST00000434813 AMIGO3Q86WK7 504 aa21.36■■□□□ 1.01
CLK1-205ENST00000434813 ZNF579Q8NAF0 562 aaKnown RBP21.36■■□□□ 1.01
CLK1-205ENST00000434813 HSD3B7Q9H2F3 369 aa21.36■■□□□ 1.01
CLK1-205ENST00000434813 CTIFO43310 598 aaKnown RBP21.35■■□□□ 1.01
CLK1-205ENST00000434813 ZNF710Q8N1W2 664 aa21.35■■□□□ 1.01
CLK1-205ENST00000434813 NSUN4Q96CB9 384 aaKnown RBP21.35■■□□□ 1.01
CLK1-205ENST00000434813 RBM28Q9NW13 759 aaKnown RBP21.35■■□□□ 1.01
CLK1-205ENST00000434813 CEP131Q9UPN4 1083 aa21.35■■□□□ 1.01
CLK1-205ENST00000434813 MYO1BO43795 1136 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 ADRA2BP18089 450 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 RPS8P62241 208 aaKnown RBP21.34■■□□□ 1.01
CLK1-205ENST00000434813 FUT2Q10981 343 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 IFIT1BQ5T764 474 aaKnown RBP21.34■■□□□ 1.01
CLK1-205ENST00000434813 CATIPQ7Z7H3 387 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 IQCA1Q86XH1 822 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 TSC1Q92574 1164 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 NOL10Q9BSC4 688 aaKnown RBP21.34■■□□□ 1.01
CLK1-205ENST00000434813 HOOK1Q9UJC3 728 aaKnown RBP21.34■■□□□ 1.01
CLK1-205ENST00000434813 PAXBP1Q9Y5B6 917 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 CALM1P0DP23 149 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 CALM2P0DP24 149 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 CALM3P0DP25 149 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 XBP1P17861 261 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 KLRK1P26718 216 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 ISM2Q6H9L7 571 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 CTR9Q6PD62 1173 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 NLRP3Q96P20 1036 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 ANKRD2Q9GZV1 360 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 PCDHB6Q9Y5E3 794 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 KIAA1551Q9HCM1 1747 aa21.34■■□□□ 1.01
CLK1-205ENST00000434813 CYP2D7A0A087X1C5 515 aa21.33■■□□□ 1.01
CLK1-205ENST00000434813 ZBTB22O15209 634 aa21.33■■□□□ 1.01
CLK1-205ENST00000434813 DDAH1O94760 285 aa21.33■■□□□ 1.01
CLK1-205ENST00000434813 LMOD1P29536 600 aaPredicted RBP21.33■■□□□ 1.01
CLK1-205ENST00000434813 FANCCQ00597 558 aa21.33■■□□□ 1.01
CLK1-205ENST00000434813 MDM2Q00987 491 aaPredicted RBP21.33■■□□□ 1.01
CLK1-205ENST00000434813 AKAP17AQ02040 695 aaKnown RBP21.33■■□□□ 1.01
CLK1-205ENST00000434813 PKN1Q16512 942 aa21.33■■□□□ 1.01
CLK1-205ENST00000434813 TMED8Q6PL24 325 aaPredicted RBP21.33■■□□□ 1.01
CLK1-205ENST00000434813 NYAP1Q6ZVC0 841 aa21.33■■□□□ 1.01
CLK1-205ENST00000434813 OXER1Q8TDS5 423 aa21.33■■□□□ 1.01
CLK1-205ENST00000434813 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.33■■□□□ 1.01
CLK1-205ENST00000434813 PCDHA5Q9Y5H7 936 aa21.33■■□□□ 1.01
CLK1-205ENST00000434813 SRPRBQ9Y5M8 271 aaKnown RBP21.33■■□□□ 1.01
CLK1-205ENST00000434813 PRPF3O43395 683 aaKnown RBP21.33■■□□□ 1
CLK1-205ENST00000434813 OLFM4Q6UX06 510 aa21.33■■□□□ 1
CLK1-205ENST00000434813 TMC6Q7Z403 805 aa21.33■■□□□ 1
CLK1-205ENST00000434813 FOXP4Q8IVH2 680 aaPredicted RBP21.33■■□□□ 1
CLK1-205ENST00000434813 SHISA4Q96DD7 197 aa21.33■■□□□ 1
CLK1-205ENST00000434813 PHF20Q9BVI0 1012 aa21.33■■□□□ 1
CLK1-205ENST00000434813 USP27XA6NNY8 438 aa21.32■■□□□ 1
CLK1-205ENST00000434813 ORC4O43929 436 aa21.32■■□□□ 1
CLK1-205ENST00000434813 MECOMQ03112 1051 aa21.32■■□□□ 1
CLK1-205ENST00000434813 GRIN1Q05586 938 aa21.32■■□□□ 1
CLK1-205ENST00000434813 TROAPQ12815 778 aa21.32■■□□□ 1
CLK1-205ENST00000434813 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.31■■□□□ 1
CLK1-205ENST00000434813 HMGB2P26583 209 aaKnown RBP21.31■■□□□ 1
CLK1-205ENST00000434813 HIBADHP31937 336 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms