RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 IGF2-ASQ6U949 168 aa9.95□□□□□ -0.82
PTPRK-212ENST00000434424 JMYQ8N9B5 988 aa9.95□□□□□ -0.82
PTPRK-212ENST00000434424 DDX54Q8TDD1 881 aaKnown RBP9.95□□□□□ -0.82
PTPRK-212ENST00000434424 GAL3ST3Q96A11 431 aa9.95□□□□□ -0.82
PTPRK-212ENST00000434424 SMG9Q9H0W8 520 aaKnown RBP9.95□□□□□ -0.82
PTPRK-212ENST00000434424 PFDN2Q9UHV9 154 aa9.95□□□□□ -0.82
PTPRK-212ENST00000434424 IFT140Q96RY7 1462 aa9.94□□□□□ -0.82
PTPRK-212ENST00000434424 PTPRAP18433 802 aa9.94□□□□□ -0.82
PTPRK-212ENST00000434424 FAM178BQ8IXR5 827 aa9.94□□□□□ -0.82
PTPRK-212ENST00000434424 ST13P5Q8NFI4 369 aaPredicted RBP9.94□□□□□ -0.82
PTPRK-212ENST00000434424 IRF2BPLQ9H1B7 796 aa9.94□□□□□ -0.82
PTPRK-212ENST00000434424 SOX13Q9UN79 622 aa9.94□□□□□ -0.82
PTPRK-212ENST00000434424 POLR3KQ9Y2Y1 108 aaPredicted RBP9.94□□□□□ -0.82
PTPRK-212ENST00000434424 PTCH2Q9Y6C5 1203 aa9.94□□□□□ -0.82
PTPRK-212ENST00000434424 A0A1W2PQH9 124 aa9.93□□□□□ -0.82
PTPRK-212ENST00000434424 DLL1O00548 723 aa9.93□□□□□ -0.82
PTPRK-212ENST00000434424 GRIN3BO60391 1043 aa9.93□□□□□ -0.82
PTPRK-212ENST00000434424 PARNO95453 639 aaKnown RBP9.93□□□□□ -0.82
PTPRK-212ENST00000434424 SSRP1Q08945 709 aaKnown RBP9.93□□□□□ -0.82
PTPRK-212ENST00000434424 LRRFIP1Q32MZ4 808 aaKnown RBP9.93□□□□□ -0.82
PTPRK-212ENST00000434424 TKFCQ3LXA3 575 aa9.93□□□□□ -0.82
PTPRK-212ENST00000434424 C6orf15Q6UXA7 325 aaPredicted RBP9.93□□□□□ -0.82
PTPRK-212ENST00000434424 RUFY4Q6ZNE9 571 aa9.93□□□□□ -0.82
PTPRK-212ENST00000434424 SPATC1Q76KD6 591 aa9.93□□□□□ -0.82
PTPRK-212ENST00000434424 VN1R5Q7Z5H4 357 aa9.93□□□□□ -0.82
PTPRK-212ENST00000434424 SYNPOQ8N3V7 929 aa9.93□□□□□ -0.82
PTPRK-212ENST00000434424 FAM177BA6PVY3 158 aa9.92□□□□□ -0.82
PTPRK-212ENST00000434424 ASMTLO95671 621 aa9.92□□□□□ -0.82
PTPRK-212ENST00000434424 ZNF252P-AS1Q0IIN9 211 aa9.92□□□□□ -0.82
PTPRK-212ENST00000434424 TTC6Q86TZ1 520 aa9.92□□□□□ -0.82
PTPRK-212ENST00000434424 ZNF669Q96BR6 464 aaPredicted RBP9.92□□□□□ -0.82
PTPRK-212ENST00000434424 TM9SF2Q99805 663 aa9.92□□□□□ -0.82
PTPRK-212ENST00000434424 ZMYM5Q9UJ78 669 aa9.92□□□□□ -0.82
PTPRK-212ENST00000434424 RNF112Q9ULX5 631 aa9.92□□□□□ -0.82
PTPRK-212ENST00000434424 URB2Q14146 1524 aaKnown RBP9.92□□□□□ -0.82
PTPRK-212ENST00000434424 B2RBV5 119 aa9.91□□□□□ -0.82
PTPRK-212ENST00000434424 DIAPH1O60610 1272 aaKnown RBP9.91□□□□□ -0.82
PTPRK-212ENST00000434424 PTPN11Q06124 597 aaPredicted RBP9.91□□□□□ -0.82
PTPRK-212ENST00000434424 PRR23CQ6ZRP0 262 aa9.91□□□□□ -0.82
PTPRK-212ENST00000434424 ADAM19Q9H013 955 aa9.91□□□□□ -0.82
PTPRK-212ENST00000434424 PPME1Q9Y570 386 aa9.91□□□□□ -0.82
PTPRK-212ENST00000434424 S100BP04271 92 aaPredicted RBP9.9□□□□□ -0.82
PTPRK-212ENST00000434424 ESRRAP11474 423 aaPredicted RBP9.9□□□□□ -0.82
PTPRK-212ENST00000434424 HCLS1P14317 486 aaPredicted RBP9.9□□□□□ -0.82
PTPRK-212ENST00000434424 GUCY2CP25092 1073 aa9.9□□□□□ -0.82
PTPRK-212ENST00000434424 AP3B2Q13367 1082 aa9.9□□□□□ -0.82
PTPRK-212ENST00000434424 MAP1SQ66K74 1059 aaPredicted RBP9.9□□□□□ -0.82
PTPRK-212ENST00000434424 DZIP1LQ8IYY4 767 aaKnown RBP9.9□□□□□ -0.82
PTPRK-212ENST00000434424 STAG1Q8WVM7 1258 aa9.9□□□□□ -0.82
PTPRK-212ENST00000434424 TYW1Q9NV66 732 aaKnown RBP9.9□□□□□ -0.82
PTPRK-212ENST00000434424 SLC12A7Q9Y666 1083 aa9.9□□□□□ -0.82
PTPRK-212ENST00000434424 RSF1Q96T23 1441 aaPredicted RBP9.9□□□□□ -0.83
PTPRK-212ENST00000434424 MEIS3P2A8K0S8 358 aa9.89□□□□□ -0.83
PTPRK-212ENST00000434424 ALX3O95076 343 aa9.89□□□□□ -0.83
PTPRK-212ENST00000434424 IKBKEQ14164 716 aa9.89□□□□□ -0.83
PTPRK-212ENST00000434424 MLECQ14165 292 aa9.89□□□□□ -0.83
PTPRK-212ENST00000434424 HSP90AB2PQ58FF8 381 aa9.89□□□□□ -0.83
PTPRK-212ENST00000434424 LCE3BQ5TA77 95 aa9.89□□□□□ -0.83
PTPRK-212ENST00000434424 ADAMTSL4Q6UY14 1074 aa9.89□□□□□ -0.83
PTPRK-212ENST00000434424 PDZD3Q86UT5 571 aa9.89□□□□□ -0.83
PTPRK-212ENST00000434424 ZSWIM2Q8NEG5 633 aa9.89□□□□□ -0.83
PTPRK-212ENST00000434424 ANTXR1Q9H6X2 564 aa9.89□□□□□ -0.83
PTPRK-212ENST00000434424 CHPF2Q9P2E5 772 aa9.89□□□□□ -0.83
PTPRK-212ENST00000434424 GSTP1P09211 210 aaKnown RBP9.88□□□□□ -0.83
PTPRK-212ENST00000434424 VIL1P09327 827 aaKnown RBP9.88□□□□□ -0.83
PTPRK-212ENST00000434424 PDGFRBP09619 1106 aa9.88□□□□□ -0.83
PTPRK-212ENST00000434424 CABP4P57796 275 aa9.88□□□□□ -0.83
PTPRK-212ENST00000434424 DALRD3Q5D0E6 543 aaKnown RBP9.88□□□□□ -0.83
PTPRK-212ENST00000434424 MPRIPQ6WCQ1 1025 aa9.88□□□□□ -0.83
PTPRK-212ENST00000434424 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.88□□□□□ -0.83
PTPRK-212ENST00000434424 EEPD1Q7L9B9 569 aa9.88□□□□□ -0.83
PTPRK-212ENST00000434424 TMEM40Q8WWA1 233 aa9.88□□□□□ -0.83
PTPRK-212ENST00000434424 PLAAQ9Y263 795 aa9.88□□□□□ -0.83
PTPRK-212ENST00000434424 ZNF608Q9ULD9 1512 aaPredicted RBP9.87□□□□□ -0.83
PTPRK-212ENST00000434424 MRM1Q6IN84 353 aaKnown RBP9.87□□□□□ -0.83
PTPRK-212ENST00000434424 KRT26Q7Z3Y9 468 aa9.87□□□□□ -0.83
PTPRK-212ENST00000434424 TAB3Q8N5C8 712 aaPredicted RBP9.87□□□□□ -0.83
PTPRK-212ENST00000434424 LACRTQ9GZZ8 138 aa9.87□□□□□ -0.83
PTPRK-212ENST00000434424 AKTIPQ9H8T0 292 aa9.87□□□□□ -0.83
PTPRK-212ENST00000434424 G3BP2Q9UN86 482 aaKnown RBP9.87□□□□□ -0.83
PTPRK-212ENST00000434424 CD2APQ9Y5K6 639 aa9.87□□□□□ -0.83
PTPRK-212ENST00000434424 PRR36Q9H6K5 1346 aa9.86□□□□□ -0.83
PTPRK-212ENST00000434424 ARAP1Q96P48 1450 aa9.86□□□□□ -0.83
PTPRK-212ENST00000434424 HTR3BO95264 441 aa9.86□□□□□ -0.83
PTPRK-212ENST00000434424 NCAPHQ15003 741 aa9.86□□□□□ -0.83
PTPRK-212ENST00000434424 TMEM67Q5HYA8 995 aa9.86□□□□□ -0.83
PTPRK-212ENST00000434424 SH2B1Q9NRF2 756 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-212ENST00000434424 PCDHA4Q9UN74 947 aa9.86□□□□□ -0.83
PTPRK-212ENST00000434424 F8W735 103 aaPredicted RBP9.85□□□□□ -0.83
PTPRK-212ENST00000434424 HGSNATQ68CP4 663 aa9.85□□□□□ -0.83
PTPRK-212ENST00000434424 VHLLQ6RSH7 139 aa9.85□□□□□ -0.83
PTPRK-212ENST00000434424 FERMT3Q86UX7 667 aa9.85□□□□□ -0.83
PTPRK-212ENST00000434424 TMEM130Q8N3G9 435 aa9.85□□□□□ -0.83
PTPRK-212ENST00000434424 ACSBG1Q96GR2 724 aa9.85□□□□□ -0.83
PTPRK-212ENST00000434424 TRIM33Q9UPN9 1127 aa9.85□□□□□ -0.83
PTPRK-212ENST00000434424 SUGT1Q9Y2Z0 365 aa9.85□□□□□ -0.83
PTPRK-212ENST00000434424 UPK3BL1B0FP48 263 aa9.84□□□□□ -0.83
PTPRK-212ENST00000434424 UPK3BL2E5RIL1 263 aa9.84□□□□□ -0.83
PTPRK-212ENST00000434424 CDC27P30260 824 aa9.84□□□□□ -0.83
PTPRK-212ENST00000434424 CDK8P49336 464 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms