RNA–Protein interactions for RNA: ENST00000433492.5

LST1-216, leukocyte specific transcript 1, human

TSL 3

Gene LST1, Length 254 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LST1-216	ENST00000433492	PLEKHH3	Q7Z736	793 aa		18.29	■□□□□ 0.52
LST1-216	ENST00000433492	TRPV1	Q8NER1	839 aa		18.29	■□□□□ 0.52
LST1-216	ENST00000433492	SYMPK	Q92797	1274 aa	Known RBP	18.29	■□□□□ 0.52
LST1-216	ENST00000433492	BAD	Q92934	168 aa		18.29	■□□□□ 0.52
LST1-216	ENST00000433492	APBA2	Q99767	749 aa		18.29	■□□□□ 0.52
LST1-216	ENST00000433492	PAGR1	Q9BTK6	254 aa		18.29	■□□□□ 0.52
LST1-216	ENST00000433492	WDR18	Q9BV38	432 aa		18.29	■□□□□ 0.52
LST1-216	ENST00000433492	ATP11B	Q9Y2G3	1177 aa		18.29	■□□□□ 0.52
LST1-216	ENST00000433492	RLF	Q13129	1914 aa		18.28	■□□□□ 0.52
LST1-216	ENST00000433492	TNFRSF10A	O00220	468 aa		18.28	■□□□□ 0.52
LST1-216	ENST00000433492	NPM3	O75607	178 aa	Known RBP	18.28	■□□□□ 0.52
LST1-216	ENST00000433492	CNMD	O75829	334 aa		18.28	■□□□□ 0.52
LST1-216	ENST00000433492	SMAD3	P84022	425 aa	Known RBP	18.28	■□□□□ 0.52
LST1-216	ENST00000433492	SH3RF1	Q7Z6J0	888 aa		18.28	■□□□□ 0.52
LST1-216	ENST00000433492	TBC1D2	Q9BYX2	928 aa		18.28	■□□□□ 0.52
LST1-216	ENST00000433492	CEP126	Q9P2H0	1117 aa		18.28	■□□□□ 0.52
LST1-216	ENST00000433492	DDX20	Q9UHI6	824 aa	Known RBP	18.28	■□□□□ 0.52
LST1-216	ENST00000433492	REV3L	O60673	3130 aa		18.27	■□□□□ 0.52
LST1-216	ENST00000433492	MAP2K5	Q13163	448 aa		18.27	■□□□□ 0.52
LST1-216	ENST00000433492	GJC2	Q5T442	439 aa	Predicted RBP	18.27	■□□□□ 0.52
LST1-216	ENST00000433492	ZGPAT	Q8N5A5	531 aa	Known RBP	18.27	■□□□□ 0.52
LST1-216	ENST00000433492	MRPL50	Q8N5N7	158 aa	Known RBP	18.27	■□□□□ 0.52
LST1-216	ENST00000433492	DNAJC18	Q9H819	358 aa		18.27	■□□□□ 0.52
LST1-216	ENST00000433492	PA2G4	Q9UQ80	394 aa	Known RBP	18.27	■□□□□ 0.52
LST1-216	ENST00000433492	ZBTB22	O15209	634 aa		18.26	■□□□□ 0.51
LST1-216	ENST00000433492	TIMM10	P62072	90 aa		18.26	■□□□□ 0.51
LST1-216	ENST00000433492	GRIN2C	Q14957	1233 aa		18.26	■□□□□ 0.51
LST1-216	ENST00000433492	TJAP1	Q5JTD0	557 aa		18.26	■□□□□ 0.51
LST1-216	ENST00000433492	LPAR1	Q92633	364 aa		18.26	■□□□□ 0.51
LST1-216	ENST00000433492	EDC3	Q96F86	508 aa	Known RBP	18.26	■□□□□ 0.51
LST1-216	ENST00000433492	AS3MT	Q9HBK9	375 aa		18.26	■□□□□ 0.51
LST1-216	ENST00000433492	PRDM5	Q9NQX1	630 aa	Predicted RBP	18.26	■□□□□ 0.51
LST1-216	ENST00000433492	TMOD4	Q9NZQ9	345 aa		18.26	■□□□□ 0.51
LST1-216	ENST00000433492	PRKAG2	Q9UGJ0	569 aa		18.26	■□□□□ 0.51
LST1-216	ENST00000433492	TRIM43B	A6NCK2	446 aa		18.25	■□□□□ 0.51
LST1-216	ENST00000433492	DNM1L	O00429	736 aa		18.25	■□□□□ 0.51
LST1-216	ENST00000433492	CIAO1	O76071	339 aa		18.25	■□□□□ 0.51
LST1-216	ENST00000433492	ITGB8	P26012	769 aa		18.25	■□□□□ 0.51
LST1-216	ENST00000433492	CNGA1	P29973	690 aa		18.25	■□□□□ 0.51
LST1-216	ENST00000433492	CYP2C19	P33261	490 aa		18.25	■□□□□ 0.51
LST1-216	ENST00000433492	EPHB4	P54760	987 aa		18.25	■□□□□ 0.51
LST1-216	ENST00000433492	SLC39A5	Q6ZMH5	540 aa		18.25	■□□□□ 0.51
LST1-216	ENST00000433492	SLF2	Q8IX21	1173 aa		18.25	■□□□□ 0.51
LST1-216	ENST00000433492	NPLOC4	Q8TAT6	608 aa		18.25	■□□□□ 0.51
LST1-216	ENST00000433492	TRIM43	Q96BQ3	446 aa	Predicted RBP	18.25	■□□□□ 0.51
LST1-216	ENST00000433492	EMILIN3	Q9NT22	766 aa		18.25	■□□□□ 0.51
LST1-216	ENST00000433492	IGHA2	P01877	340 aa		18.24	■□□□□ 0.51
LST1-216	ENST00000433492	TRIM60	Q495X7	471 aa		18.24	■□□□□ 0.51
LST1-216	ENST00000433492	PI16	Q6UXB8	463 aa		18.24	■□□□□ 0.51
LST1-216	ENST00000433492	TBC1D9	Q6ZT07	1266 aa		18.24	■□□□□ 0.51
LST1-216	ENST00000433492	NSUN4	Q96CB9	384 aa	Known RBP	18.24	■□□□□ 0.51
LST1-216	ENST00000433492	PDLIM7	Q9NR12	457 aa		18.24	■□□□□ 0.51
LST1-216	ENST00000433492	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	18.24	■□□□□ 0.51
LST1-216	ENST00000433492	GDF11	O95390	407 aa		18.23	■□□□□ 0.51
LST1-216	ENST00000433492	MFSD14C	Q5VZR4	134 aa		18.23	■□□□□ 0.51
LST1-216	ENST00000433492	ANO1	Q5XXA6	986 aa		18.23	■□□□□ 0.51
LST1-216	ENST00000433492	ERICH6	Q7L0X2	663 aa		18.23	■□□□□ 0.51
LST1-216	ENST00000433492	CCAR1	Q8IX12	1150 aa	Known RBP	18.23	■□□□□ 0.51
LST1-216	ENST00000433492	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	18.23	■□□□□ 0.51
LST1-216	ENST00000433492	PDS5A	Q29RF7	1337 aa	Known RBP	18.23	■□□□□ 0.51
LST1-216	ENST00000433492	CHD7	Q9P2D1	2997 aa		18.22	■□□□□ 0.51
LST1-216	ENST00000433492	USP17L10	C9JJH3	530 aa		18.22	■□□□□ 0.51
LST1-216	ENST00000433492	PLA2G5	P39877	138 aa		18.22	■□□□□ 0.51
LST1-216	ENST00000433492	SPTY2D1	Q68D10	685 aa	Predicted RBP	18.22	■□□□□ 0.51
LST1-216	ENST00000433492	HERC5	Q9UII4	1024 aa	Known RBP	18.22	■□□□□ 0.51
LST1-216	ENST00000433492	C19orf81	C9J6K1	198 aa		18.21	■□□□□ 0.51
LST1-216	ENST00000433492	ASNS	P08243	561 aa		18.21	■□□□□ 0.51
LST1-216	ENST00000433492	PTPRE	P23469	700 aa		18.21	■□□□□ 0.51
LST1-216	ENST00000433492	IL15	P40933	162 aa	Predicted RBP	18.21	■□□□□ 0.51
LST1-216	ENST00000433492	SNX17	Q15036	470 aa		18.21	■□□□□ 0.51
LST1-216	ENST00000433492	TEX11	Q8IYF3	940 aa		18.21	■□□□□ 0.51
LST1-216	ENST00000433492	HMG20B	Q9P0W2	317 aa		18.21	■□□□□ 0.51
LST1-216	ENST00000433492	FBXO3	Q9UK99	471 aa		18.21	■□□□□ 0.51
LST1-216	ENST00000433492	HOXC6	P09630	235 aa		18.2	■□□□□ 0.5
LST1-216	ENST00000433492	CYBA	P13498	195 aa		18.2	■□□□□ 0.5
LST1-216	ENST00000433492	ATP2B2	Q01814	1243 aa		18.2	■□□□□ 0.5
LST1-216	ENST00000433492	XAGE2	Q96GT9	111 aa		18.2	■□□□□ 0.5
LST1-216	ENST00000433492	BTBD7	Q9P203	1132 aa		18.2	■□□□□ 0.5
LST1-216	ENST00000433492	PI4KB	Q9UBF8	816 aa		18.2	■□□□□ 0.5
LST1-216	ENST00000433492	ZBTB21	Q9ULJ3	1066 aa		18.2	■□□□□ 0.5
LST1-216	ENST00000433492	SLC15A5	A6NIM6	579 aa		18.19	■□□□□ 0.5
LST1-216	ENST00000433492	MSC	O60682	206 aa		18.19	■□□□□ 0.5
LST1-216	ENST00000433492	GRB14	Q14449	540 aa		18.19	■□□□□ 0.5
LST1-216	ENST00000433492	WDR78	Q5VTH9	848 aa		18.19	■□□□□ 0.5
LST1-216	ENST00000433492	METTL16	Q86W50	562 aa	Known RBP	18.19	■□□□□ 0.5
LST1-216	ENST00000433492	FERMT2	Q96AC1	680 aa		18.19	■□□□□ 0.5
LST1-216	ENST00000433492	CWC22	Q9HCG8	908 aa	Known RBP	18.19	■□□□□ 0.5
LST1-216	ENST00000433492	RABGAP1	Q9Y3P9	1069 aa		18.19	■□□□□ 0.5
LST1-216	ENST00000433492	TMEM265	A0A087WTH1	108 aa		18.18	■□□□□ 0.5
LST1-216	ENST00000433492		A0A1B0GUL7	405 aa		18.18	■□□□□ 0.5
LST1-216	ENST00000433492	ADCYAP1R1	P41586	468 aa		18.18	■□□□□ 0.5
LST1-216	ENST00000433492	ZYX	Q15942	572 aa	Known RBP	18.18	■□□□□ 0.5
LST1-216	ENST00000433492	RNPC3	Q96LT9	517 aa	Known RBP	18.18	■□□□□ 0.5
LST1-216	ENST00000433492	PTPRC	P08575	1304 aa		18.18	■□□□□ 0.5
LST1-216	ENST00000433492	MAP4K4	O95819	1239 aa	Predicted RBP	18.17	■□□□□ 0.5
LST1-216	ENST00000433492	TLE2	Q04725	743 aa		18.17	■□□□□ 0.5
LST1-216	ENST00000433492	MAPKAPK5	Q8IW41	473 aa		18.17	■□□□□ 0.5
LST1-216	ENST00000433492	GTF3C2	Q8WUA4	911 aa	Predicted RBP	18.17	■□□□□ 0.5
LST1-216	ENST00000433492	PPM1E	Q8WY54	764 aa		18.17	■□□□□ 0.5
LST1-216	ENST00000433492	SSH1	Q8WYL5	1049 aa		18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms