RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 NBPF11Q86T75 865 aa17.6■□□□□ 0.41
SF1-209ENST00000433274 C7orf43Q8WVR3 580 aa17.6■□□□□ 0.41
SF1-209ENST00000433274 GOLGB1Q14789 3259 aaKnown RBP17.6■□□□□ 0.41
SF1-209ENST00000433274 LIG1P18858 919 aa17.6■□□□□ 0.41
SF1-209ENST00000433274 TROAPQ12815 778 aa17.6■□□□□ 0.41
SF1-209ENST00000433274 BRAPQ7Z569 592 aa17.6■□□□□ 0.41
SF1-209ENST00000433274 WASF1Q92558 559 aa17.6■□□□□ 0.41
SF1-209ENST00000433274 PPP2R5BQ15173 497 aa17.59■□□□□ 0.41
SF1-209ENST00000433274 RCOR1Q9UKL0 485 aa17.59■□□□□ 0.41
SF1-209ENST00000433274 MYH15Q9Y2K3 1946 aa17.59■□□□□ 0.41
SF1-209ENST00000433274 ECE2O60344 883 aa17.59■□□□□ 0.41
SF1-209ENST00000433274 CALM1P0DP23 149 aa17.59■□□□□ 0.41
SF1-209ENST00000433274 CALM2P0DP24 149 aa17.59■□□□□ 0.41
SF1-209ENST00000433274 CALM3P0DP25 149 aa17.59■□□□□ 0.41
SF1-209ENST00000433274 PICALMQ13492 652 aa17.59■□□□□ 0.41
SF1-209ENST00000433274 MYSM1Q5VVJ2 828 aa17.59■□□□□ 0.41
SF1-209ENST00000433274 ZNF444Q8N0Y2 327 aaPredicted RBP17.59■□□□□ 0.41
SF1-209ENST00000433274 RGS22Q8NE09 1264 aa17.59■□□□□ 0.41
SF1-209ENST00000433274 BICD2Q8TD16 824 aa17.59■□□□□ 0.41
SF1-209ENST00000433274 CDK5RAP2Q96SN8 1893 aa17.58■□□□□ 0.41
SF1-209ENST00000433274 C21orf2O43822 256 aa17.58■□□□□ 0.41
SF1-209ENST00000433274 DDAH1O94760 285 aa17.58■□□□□ 0.41
SF1-209ENST00000433274 TSPY3P0CV98 308 aa17.58■□□□□ 0.41
SF1-209ENST00000433274 TSPY8P0CW00 308 aa17.58■□□□□ 0.41
SF1-209ENST00000433274 GNL2Q13823 731 aaKnown RBP17.58■□□□□ 0.41
SF1-209ENST00000433274 AOC3Q16853 763 aa17.58■□□□□ 0.41
SF1-209ENST00000433274 RBSNQ9H1K0 784 aa17.58■□□□□ 0.41
SF1-209ENST00000433274 IL17RBQ9NRM6 502 aa17.58■□□□□ 0.41
SF1-209ENST00000433274 ECM29Q5VYK3 1845 aa17.58■□□□□ 0.4
SF1-209ENST00000433274 USP17L3A6NCW0 530 aa17.58■□□□□ 0.4
SF1-209ENST00000433274 USP17L4A6NCW7 530 aa17.58■□□□□ 0.4
SF1-209ENST00000433274 PLEKHA8P1O95397 391 aa17.58■□□□□ 0.4
SF1-209ENST00000433274 DEXIO95424 95 aa17.58■□□□□ 0.4
SF1-209ENST00000433274 RCSD1Q6JBY9 416 aa17.58■□□□□ 0.4
SF1-209ENST00000433274 USP17L1Q7RTZ2 530 aa17.58■□□□□ 0.4
SF1-209ENST00000433274 RBM28Q9NW13 759 aaKnown RBP17.58■□□□□ 0.4
SF1-209ENST00000433274 DLEC1Q9Y238 1755 aa17.57■□□□□ 0.4
SF1-209ENST00000433274 C10orf71Q711Q0 1435 aa17.57■□□□□ 0.4
SF1-209ENST00000433274 TEKT1Q969V4 418 aa17.57■□□□□ 0.4
SF1-209ENST00000433274 RASA1P20936 1047 aa17.56■□□□□ 0.4
SF1-209ENST00000433274 NASPP49321 788 aaPredicted RBP17.56■□□□□ 0.4
SF1-209ENST00000433274 CDK8P49336 464 aa17.56■□□□□ 0.4
SF1-209ENST00000433274 C16orf86Q6ZW13 317 aa17.56■□□□□ 0.4
SF1-209ENST00000433274 CTCFLQ8NI51 663 aaPredicted RBP17.56■□□□□ 0.4
SF1-209ENST00000433274 TSPY26PQ9H489 355 aa17.56■□□□□ 0.4
SF1-209ENST00000433274 KAT14Q9H8E8 782 aa17.56■□□□□ 0.4
SF1-209ENST00000433274 ZNF287Q9HBT7 754 aa17.56■□□□□ 0.4
SF1-209ENST00000433274 USP40Q9NVE5 1235 aa17.56■□□□□ 0.4
SF1-209ENST00000433274 DACT1Q9NYF0 836 aa17.56■□□□□ 0.4
SF1-209ENST00000433274 RTEL1Q9NZ71 1219 aa17.56■□□□□ 0.4
SF1-209ENST00000433274 CLIC4Q9Y696 253 aa17.56■□□□□ 0.4
SF1-209ENST00000433274 LETM1O95202 739 aaPredicted RBP17.56■□□□□ 0.4
SF1-209ENST00000433274 NT5C2P49902 561 aa17.56■□□□□ 0.4
SF1-209ENST00000433274 AKAP17AQ02040 695 aaKnown RBP17.56■□□□□ 0.4
SF1-209ENST00000433274 STRIP1Q5VSL9 837 aa17.56■□□□□ 0.4
SF1-209ENST00000433274 KIAA0825Q8IV33 1275 aa17.56■□□□□ 0.4
SF1-209ENST00000433274 RNF26Q9BY78 433 aaPredicted RBP17.56■□□□□ 0.4
SF1-209ENST00000433274 KCNJ14Q9UNX9 436 aa17.56■□□□□ 0.4
SF1-209ENST00000433274 hCG_1642624A0A1W2PR95 340 aa17.55■□□□□ 0.4
SF1-209ENST00000433274 ME1P48163 572 aa17.55■□□□□ 0.4
SF1-209ENST00000433274 CC2D2BQ6DHV5 1058 aa17.55■□□□□ 0.4
SF1-209ENST00000433274 DGKHQ86XP1 1220 aa17.55■□□□□ 0.4
SF1-209ENST00000433274 DDX4Q9NQI0 724 aaKnown RBP17.55■□□□□ 0.4
SF1-209ENST00000433274 DDX60LQ5H9U9 1706 aaKnown RBP17.55■□□□□ 0.4
SF1-209ENST00000433274 WDHD1O75717 1129 aaPredicted RBP17.55■□□□□ 0.4
SF1-209ENST00000433274 KIAA2012Q0VF49 1180 aa17.55■□□□□ 0.4
SF1-209ENST00000433274 FUT2Q10981 343 aa17.55■□□□□ 0.4
SF1-209ENST00000433274 STK38Q15208 465 aa17.55■□□□□ 0.4
SF1-209ENST00000433274 DACT2Q5SW24 774 aa17.55■□□□□ 0.4
SF1-209ENST00000433274 HHIPL2Q6UWX4 724 aa17.55■□□□□ 0.4
SF1-209ENST00000433274 TMTC3Q6ZXV5 915 aa17.55■□□□□ 0.4
SF1-209ENST00000433274 TTLL6Q8N841 843 aa17.55■□□□□ 0.4
SF1-209ENST00000433274 SLC16A10Q8TF71 515 aa17.55■□□□□ 0.4
SF1-209ENST00000433274 NR1I2O75469 434 aa17.54■□□□□ 0.4
SF1-209ENST00000433274 MMP1P03956 469 aa17.54■□□□□ 0.4
SF1-209ENST00000433274 U2AF2P26368 475 aaKnown RBP eCLIP17.54■□□□□ 0.44e-8■■■■■ 38.7
SF1-209ENST00000433274 CRKP46108 304 aa17.54■□□□□ 0.4
SF1-209ENST00000433274 CAMK4Q16566 473 aa17.54■□□□□ 0.4
SF1-209ENST00000433274 APOBEC3HQ6NTF7 200 aaKnown RBP17.54■□□□□ 0.4
SF1-209ENST00000433274 CDC42EP5Q6NZY7 148 aa17.54■□□□□ 0.4
SF1-209ENST00000433274 LINC00301Q8NCQ3 95 aa17.54■□□□□ 0.4
SF1-209ENST00000433274 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.54■□□□□ 0.4
SF1-209ENST00000433274 POLR3EQ9NVU0 708 aa17.54■□□□□ 0.4
SF1-209ENST00000433274 V9GY48 417 aaPredicted RBP17.54■□□□□ 0.4
SF1-209ENST00000433274 SNED1Q8TER0 1413 aa17.54■□□□□ 0.4
SF1-209ENST00000433274 PPIP5K2O43314 1243 aa17.54■□□□□ 0.4
SF1-209ENST00000433274 SAFBQ15424 915 aaKnown RBP eCLIP17.54■□□□□ 0.4
SF1-209ENST00000433274 PNMA1Q8ND90 353 aa17.54■□□□□ 0.4
SF1-209ENST00000433274 NUP62CLQ9H1M0 184 aa17.54■□□□□ 0.4
SF1-209ENST00000433274 STX8Q9UNK0 236 aa17.54■□□□□ 0.4
SF1-209ENST00000433274 ADAMTSL1Q8N6G6 1762 aa17.53■□□□□ 0.4
SF1-209ENST00000433274 MYH1P12882 1939 aa17.53■□□□□ 0.4
SF1-209ENST00000433274 PRPF3O43395 683 aaKnown RBP17.53■□□□□ 0.4
SF1-209ENST00000433274 DPEP1P16444 411 aa17.53■□□□□ 0.4
SF1-209ENST00000433274 SF3A1Q15459 793 aaKnown RBP17.53■□□□□ 0.4
SF1-209ENST00000433274 PKN1Q16512 942 aa17.53■□□□□ 0.4
SF1-209ENST00000433274 CCDC178Q5BJE1 867 aa17.53■□□□□ 0.4
SF1-209ENST00000433274 CCAR1Q8IX12 1150 aaKnown RBP17.53■□□□□ 0.4
SF1-209ENST00000433274 DIS3L2Q8IYB7 885 aaKnown RBP17.53■□□□□ 0.4
SF1-209ENST00000433274 SRBD1Q8N5C6 995 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms