RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 ERO1AQ96HE7 468 aa8.26□□□□□ -1.09
COL28A1-202ENST00000430711 CARD6Q9BX69 1037 aa8.26□□□□□ -1.09
COL28A1-202ENST00000430711 ZCCHC17Q9NP64 241 aaKnown RBP8.26□□□□□ -1.09
COL28A1-202ENST00000430711 TMOD3Q9NYL9 352 aa8.26□□□□□ -1.09
COL28A1-202ENST00000430711 KCNH3Q9ULD8 1083 aa8.26□□□□□ -1.09
COL28A1-202ENST00000430711 MAP3K15Q6ZN16 1313 aa8.26□□□□□ -1.09
COL28A1-202ENST00000430711 RNF225M0QZC1 329 aaPredicted RBP8.26□□□□□ -1.09
COL28A1-202ENST00000430711 POLR2DO15514 142 aaKnown RBP8.26□□□□□ -1.09
COL28A1-202ENST00000430711 SERPINC1P01008 464 aa8.26□□□□□ -1.09
COL28A1-202ENST00000430711 GYS2P54840 703 aa8.26□□□□□ -1.09
COL28A1-202ENST00000430711 STX17P56962 302 aa8.26□□□□□ -1.09
COL28A1-202ENST00000430711 SLC4A8Q2Y0W8 1093 aa8.26□□□□□ -1.09
COL28A1-202ENST00000430711 GIGYF2Q6Y7W6 1299 aaKnown RBP8.26□□□□□ -1.09
COL28A1-202ENST00000430711 C3orf67Q6ZVT6 689 aa8.26□□□□□ -1.09
COL28A1-202ENST00000430711 DIS3L2Q8IYB7 885 aaKnown RBP8.26□□□□□ -1.09
COL28A1-202ENST00000430711 TC2NQ8N9U0 490 aa8.26□□□□□ -1.09
COL28A1-202ENST00000430711 EPSTI1Q96J88 318 aa8.26□□□□□ -1.09
COL28A1-202ENST00000430711 GJD4Q96KN9 370 aaPredicted RBP8.26□□□□□ -1.09
COL28A1-202ENST00000430711 KCND1Q9NSA2 647 aa8.26□□□□□ -1.09
COL28A1-202ENST00000430711 MYH6P13533 1939 aa8.26□□□□□ -1.09
COL28A1-202ENST00000430711 EP400Q96L91 3159 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 SOWAHDA6NJG2 315 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 IFIT3O14879 490 aaKnown RBP8.25□□□□□ -1.09
COL28A1-202ENST00000430711 CYP19A1P11511 503 aaPredicted RBP8.25□□□□□ -1.09
COL28A1-202ENST00000430711 FGFR2P21802 821 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 CDC25AP30304 524 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 IARSP41252 1262 aaKnown RBP8.25□□□□□ -1.09
COL28A1-202ENST00000430711 MYL5Q02045 173 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 TERF2Q15554 542 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 ZNF771Q7L3S4 317 aaPredicted RBP8.25□□□□□ -1.09
COL28A1-202ENST00000430711 APTXQ7Z2E3 356 aaKnown RBP8.25□□□□□ -1.09
COL28A1-202ENST00000430711 CDAN1Q8IWY9 1227 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 CNNM3Q8NE01 707 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 ZNF384Q8TF68 577 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 FEZ1Q99689 392 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 PLA2G12BQ9BX93 195 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 GTPBP4Q9BZE4 634 aaKnown RBP8.25□□□□□ -1.09
COL28A1-202ENST00000430711 NAT10Q9H0A0 1025 aaKnown RBP8.25□□□□□ -1.09
COL28A1-202ENST00000430711 ZSWIM4Q9H7M6 989 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 TRMT112Q9UI30 125 aaKnown RBP8.25□□□□□ -1.09
COL28A1-202ENST00000430711 AKAP2Q9Y2D5 859 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 ARAP2Q8WZ64 1704 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 NEMFO60524 1076 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 NMT2O60551 498 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 URI1O94763 535 aaPredicted RBP8.25□□□□□ -1.09
COL28A1-202ENST00000430711 PLEKHA8P1O95397 391 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 ADAMTS2O95450 1211 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 ZFYP08048 801 aaPredicted RBP8.25□□□□□ -1.09
COL28A1-202ENST00000430711 GSDMDP57764 484 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 ETF1P62495 437 aaKnown RBP8.25□□□□□ -1.09
COL28A1-202ENST00000430711 TBX2Q13207 712 aaPredicted RBP8.25□□□□□ -1.09
COL28A1-202ENST00000430711 HOMER1Q86YM7 354 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 NUP133Q8WUM0 1156 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 CSRNP2Q9H175 543 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 TOMM22Q9NS69 142 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 VPS54Q9P1Q0 977 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 IMPACTQ9P2X3 320 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 NFE2L3Q9Y4A8 694 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 MYH8P13535 1937 aa8.25□□□□□ -1.09
COL28A1-202ENST00000430711 TIAM2Q8IVF5 1701 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 ABCC12Q96J65 1359 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 FAM237AA0A1B0GTK4 181 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 IKBKBO14920 756 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 ACTN4O43707 911 aaKnown RBP8.24□□□□□ -1.09
COL28A1-202ENST00000430711 TADA3O75528 432 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 PNMA6AP0CW24 399 aaPredicted RBP8.24□□□□□ -1.09
COL28A1-202ENST00000430711 ZNF18P17022 549 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 ARID4AP29374 1257 aaPredicted RBP8.24□□□□□ -1.09
COL28A1-202ENST00000430711 AFMP43652 599 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 KCNQ4P56696 695 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 R3HDM1Q15032 1099 aaKnown RBP8.24□□□□□ -1.09
COL28A1-202ENST00000430711 SUSD4Q5VX71 490 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 KLHL10Q6JEL2 608 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 KIF6Q6ZMV9 814 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 NOSTRINQ8IVI9 506 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 SPATA5Q8NB90 893 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 CCDC150Q8NCX0 1101 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 KIFC2Q96AC6 838 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 AIDAQ96BJ3 306 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 TFR2Q9UP52 801 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 PPP2R2CQ9Y2T4 447 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 MYH13Q9UKX3 1938 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 ANKRD18BA2A2Z9 1011 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 NKRFO15226 690 aaKnown RBP eCLIP8.24□□□□□ -1.09
COL28A1-202ENST00000430711 PPP6R2O75170 966 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 FMNL1O95466 1100 aaPredicted RBP8.24□□□□□ -1.09
COL28A1-202ENST00000430711 MMP1P03956 469 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 KLRK1P26718 216 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 DYNLL1P63167 89 aaKnown RBP8.24□□□□□ -1.09
COL28A1-202ENST00000430711 TRIM28Q13263 835 aaKnown RBP8.24□□□□□ -1.09
COL28A1-202ENST00000430711 GNL2Q13823 731 aaKnown RBP8.24□□□□□ -1.09
COL28A1-202ENST00000430711 UBE3CQ15386 1083 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 RAD9BQ6WBX8 426 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 RASGRP2Q7LDG7 609 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 SGMS1Q86VZ5 419 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 SPDYE1Q8NFV5 336 aaPredicted RBP8.24□□□□□ -1.09
COL28A1-202ENST00000430711 CPLX3Q8WVH0 158 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 CARD10Q9BWT7 1032 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 CABP5Q9NP86 173 aa8.24□□□□□ -1.09
COL28A1-202ENST00000430711 MYH14Q7Z406 1995 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms