RNA–Protein interactions for RNA: ENST00000430374.5

SMARCAL1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-207ENST00000430374 KCNH4Q9UQ05 1017 aa11.32□□□□□ -0.6
SMARCAL1-207ENST00000430374 SIPA1L1O43166 1804 aa11.31□□□□□ -0.6
SMARCAL1-207ENST00000430374 MANSC4A6NHS7 340 aaPredicted RBP11.31□□□□□ -0.6
SMARCAL1-207ENST00000430374 MINDY4BA8MYZ0 360 aa11.31□□□□□ -0.6
SMARCAL1-207ENST00000430374 IRF6O14896 467 aa11.31□□□□□ -0.6
SMARCAL1-207ENST00000430374 CDC45O75419 566 aa11.31□□□□□ -0.6
SMARCAL1-207ENST00000430374 TM4SF4P48230 202 aa11.31□□□□□ -0.6
SMARCAL1-207ENST00000430374 CDK8P49336 464 aa11.31□□□□□ -0.6
SMARCAL1-207ENST00000430374 KIF23Q02241 960 aaPredicted RBP11.31□□□□□ -0.6
SMARCAL1-207ENST00000430374 CCDC17Q96LX7 622 aa11.31□□□□□ -0.6
SMARCAL1-207ENST00000430374 ESYT1Q9BSJ8 1104 aa11.31□□□□□ -0.6
SMARCAL1-207ENST00000430374 ZNF287Q9HBT7 754 aa11.31□□□□□ -0.6
SMARCAL1-207ENST00000430374 AFG3L2Q9Y4W6 797 aa11.31□□□□□ -0.6
SMARCAL1-207ENST00000430374 ZHX2Q9Y6X8 837 aa11.31□□□□□ -0.6
SMARCAL1-207ENST00000430374 CDK5RAP2Q96SN8 1893 aa11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 USP17L5A8MUK1 530 aa11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 CXCL11O14625 94 aa11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 GDF11O95390 407 aa11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 GH2P01242 217 aa11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 SLC3A2P08195 630 aaKnown RBP11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 FGRP09769 529 aa11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 GUCY1A2P33402 732 aa11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 GTF2A2P52657 109 aa11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 INHBEP58166 350 aa11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 MAP2K1Q02750 393 aaPredicted RBP11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 SREBF2Q12772 1141 aa11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 MKRN3Q13064 507 aaKnown RBP11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 SNAPC2Q13487 334 aa11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 ABCB5Q2M3G0 1257 aa11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 SHROOM1Q2M3G4 852 aaPredicted RBP11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 CASC1Q6TDU7 716 aa11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 WDR18Q9BV38 432 aa11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 CTNNA3Q9UI47 895 aa11.3□□□□□ -0.6
SMARCAL1-207ENST00000430374 NAV1Q8NEY1 1877 aa11.29□□□□□ -0.6
SMARCAL1-207ENST00000430374 OTOFQ9HC10 1997 aa11.29□□□□□ -0.6
SMARCAL1-207ENST00000430374 A0A0G2JLL6 359 aaPredicted RBP11.29□□□□□ -0.6
SMARCAL1-207ENST00000430374 PCP11498 1178 aaKnown RBP11.29□□□□□ -0.6
SMARCAL1-207ENST00000430374 RASA1P20936 1047 aa11.29□□□□□ -0.6
SMARCAL1-207ENST00000430374 PDE4BQ07343 736 aa11.29□□□□□ -0.6
SMARCAL1-207ENST00000430374 TMEM179Q6ZVK1 233 aa11.29□□□□□ -0.6
SMARCAL1-207ENST00000430374 PRRT2Q7Z6L0 340 aaPredicted RBP11.29□□□□□ -0.6
SMARCAL1-207ENST00000430374 ZNF280CQ8ND82 737 aa11.29□□□□□ -0.6
SMARCAL1-207ENST00000430374 WBP1LQ9NX94 342 aa11.29□□□□□ -0.6
SMARCAL1-207ENST00000430374 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMARCAL1-207ENST00000430374 CETPP11597 493 aa11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 AKR1B1P15121 316 aa11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 NT5C2P49902 561 aa11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 PTH1RQ03431 593 aa11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 MOGSQ13724 837 aa11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 CCDC84Q86UT8 332 aaPredicted RBP11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 IFNL1Q8IU54 200 aa11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 STAG1Q8WVM7 1258 aa11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 BRI3BPQ8WY22 251 aa11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 MAP4K1Q92918 833 aa11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 PTPN18Q99952 460 aa11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 LSG1Q9H089 658 aaKnown RBP11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 NBPF3Q9H094 633 aa11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 MKNK2Q9HBH9 465 aa11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 AS3MTQ9HBK9 375 aa11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 CABP5Q9NP86 173 aa11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 PLIN4Q96Q06 1357 aa11.28□□□□□ -0.6
SMARCAL1-207ENST00000430374 TRIM75PA6NK02 468 aa11.27□□□□□ -0.61
SMARCAL1-207ENST00000430374 ZNF213O14771 459 aa11.27□□□□□ -0.61
SMARCAL1-207ENST00000430374 CA12O43570 354 aa11.27□□□□□ -0.61
SMARCAL1-207ENST00000430374 ORC4O43929 436 aa11.27□□□□□ -0.61
SMARCAL1-207ENST00000430374 CTDSPL2Q05D32 466 aa11.27□□□□□ -0.61
SMARCAL1-207ENST00000430374 SPP2Q13103 211 aa11.27□□□□□ -0.61
SMARCAL1-207ENST00000430374 SEPT2Q15019 361 aa11.27□□□□□ -0.61
SMARCAL1-207ENST00000430374 RAB3GAP1Q15042 981 aa11.27□□□□□ -0.61
SMARCAL1-207ENST00000430374 IMMTQ16891 758 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-207ENST00000430374 SH3D19Q5HYK7 790 aa11.27□□□□□ -0.61
SMARCAL1-207ENST00000430374 TBC1D10CQ8IV04 446 aa11.27□□□□□ -0.61
SMARCAL1-207ENST00000430374 ZCCHC17Q9NP64 241 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-207ENST00000430374 SAGE1Q9NXZ1 904 aa11.27□□□□□ -0.61
SMARCAL1-207ENST00000430374 TACC3Q9Y6A5 838 aa11.27□□□□□ -0.61
SMARCAL1-207ENST00000430374 U3KPZ7 1027 aaPredicted RBP11.27□□□□□ -0.61
SMARCAL1-207ENST00000430374 CCL15-CCL14A0A0B4J2E2 113 aa11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 IGKV6D-41A0A0C4DH26 115 aa11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 IGF2BP3O00425 579 aaKnown RBP eCLIP11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 MPHOSPH10O00566 681 aaKnown RBP11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 PRDM1O75626 825 aa11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 ALDH1A1P00352 501 aa11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 BACE1P56817 501 aa11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 HAND2P61296 217 aa11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 MTMR2Q13614 643 aa11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 CCL15Q16663 113 aa11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 AKNAD1Q5T1N1 836 aa11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 KIAA1211Q6ZU35 1233 aa11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 FASTKD5Q7L8L6 764 aaKnown RBP11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 SIAH1Q8IUQ4 282 aa11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 ZNF444Q8N0Y2 327 aaPredicted RBP11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 STK11IPQ8N1F8 1099 aa11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 NEDD1Q8NHV4 660 aa11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 CFHR5Q9BXR6 569 aa11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 KIAA1683Q9H0B3 1180 aa11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 RNF41Q9H4P4 317 aaPredicted RBP11.26□□□□□ -0.61
SMARCAL1-207ENST00000430374 KANSL2Q9H9L4 492 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms