RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 HOXA7P31268 230 aaPredicted RBP18.17■□□□□ 0.5
MSH5-208ENST00000429846 IRX3P78415 501 aaPredicted RBP18.17■□□□□ 0.5
MSH5-208ENST00000429846 MORF4L1Q9UBU8 362 aa18.17■□□□□ 0.5
MSH5-208ENST00000429846 PALD1Q9ULE6 856 aa18.17■□□□□ 0.5
MSH5-208ENST00000429846 USP17L10C9JJH3 530 aa18.16■□□□□ 0.5
MSH5-208ENST00000429846 H0YGN5 161 aa18.16■□□□□ 0.5
MSH5-208ENST00000429846 FARP2O94887 1054 aaPredicted RBP18.16■□□□□ 0.5
MSH5-208ENST00000429846 HSP90AB4PQ58FF6 505 aa18.16■□□□□ 0.5
MSH5-208ENST00000429846 MIER1Q8N108 512 aa18.16■□□□□ 0.5
MSH5-208ENST00000429846 DPF3Q92784 378 aa18.16■□□□□ 0.5
MSH5-208ENST00000429846 PAK6Q9NQU5 681 aaPredicted RBP18.16■□□□□ 0.5
MSH5-208ENST00000429846 ZBTB21Q9ULJ3 1066 aa18.16■□□□□ 0.5
MSH5-208ENST00000429846 COLQQ9Y215 455 aaPredicted RBP18.16■□□□□ 0.5
MSH5-208ENST00000429846 DDX60LQ5H9U9 1706 aaKnown RBP18.15■□□□□ 0.5
MSH5-208ENST00000429846 MS4A1P11836 297 aa18.15■□□□□ 0.5
MSH5-208ENST00000429846 MAP3K12Q12852 859 aa18.15■□□□□ 0.5
MSH5-208ENST00000429846 GTF3C2Q8WUA4 911 aaPredicted RBP18.15■□□□□ 0.5
MSH5-208ENST00000429846 TAOK2Q9UL54 1235 aa18.15■□□□□ 0.5
MSH5-208ENST00000429846 PLXNB2O15031 1838 aa18.14■□□□□ 0.5
MSH5-208ENST00000429846 GDF11O95390 407 aa18.14■□□□□ 0.49
MSH5-208ENST00000429846 HMGCRP04035 888 aa18.14■□□□□ 0.49
MSH5-208ENST00000429846 USP5P45974 858 aa18.14■□□□□ 0.49
MSH5-208ENST00000429846 FXR1P51114 621 aaKnown RBP eCLIP18.14■□□□□ 0.49
MSH5-208ENST00000429846 DYNLL1P63167 89 aaKnown RBP18.14■□□□□ 0.49
MSH5-208ENST00000429846 DIEXFQ68CQ4 756 aaKnown RBP18.14■□□□□ 0.49
MSH5-208ENST00000429846 AACSQ86V21 672 aa18.14■□□□□ 0.49
MSH5-208ENST00000429846 MAGEB6Q8N7X4 407 aa18.14■□□□□ 0.49
MSH5-208ENST00000429846 EHD4Q9H223 541 aa18.14■□□□□ 0.49
MSH5-208ENST00000429846 EXOC6BQ9Y2D4 811 aa18.14■□□□□ 0.49
MSH5-208ENST00000429846 TTF1Q15361 905 aaPredicted RBP18.13■□□□□ 0.49
MSH5-208ENST00000429846 MIGA1Q8NAN2 632 aa18.13■□□□□ 0.49
MSH5-208ENST00000429846 DEFB118Q96PH6 123 aa18.13■□□□□ 0.49
MSH5-208ENST00000429846 SAP30BPQ9UHR5 308 aaKnown RBP18.13■□□□□ 0.49
MSH5-208ENST00000429846 SERPINB13Q9UIV8 391 aa18.13■□□□□ 0.49
MSH5-208ENST00000429846 NR2E3Q9Y5X4 410 aa18.13■□□□□ 0.49
MSH5-208ENST00000429846 TRIOBPQ9H2D6 2365 aa18.13■□□□□ 0.49
MSH5-208ENST00000429846 NAV1Q8NEY1 1877 aa18.13■□□□□ 0.49
MSH5-208ENST00000429846 HERVK_113P62684 666 aa18.12■□□□□ 0.49
MSH5-208ENST00000429846 JAG1P78504 1218 aa18.12■□□□□ 0.49
MSH5-208ENST00000429846 TATDN1Q6P1N9 297 aa18.12■□□□□ 0.49
MSH5-208ENST00000429846 TTC6Q86TZ1 520 aa18.12■□□□□ 0.49
MSH5-208ENST00000429846 SOCS4Q8WXH5 440 aa18.12■□□□□ 0.49
MSH5-208ENST00000429846 CRISPLD2Q9H0B8 497 aa18.12■□□□□ 0.49
MSH5-208ENST00000429846 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.12■□□□□ 0.49
MSH5-208ENST00000429846 GJD2Q9UKL4 321 aa18.12■□□□□ 0.49
MSH5-208ENST00000429846 TFRCP02786 760 aaKnown RBP18.11■□□□□ 0.49
MSH5-208ENST00000429846 USP17L2Q6R6M4 530 aa18.11■□□□□ 0.49
MSH5-208ENST00000429846 GPRC5AQ8NFJ5 357 aa18.11■□□□□ 0.49
MSH5-208ENST00000429846 RHPN1Q8TCX5 695 aa18.11■□□□□ 0.49
MSH5-208ENST00000429846 PANK1Q8TE04 598 aa18.11■□□□□ 0.49
MSH5-208ENST00000429846 C12orf42Q96LP6 360 aa18.11■□□□□ 0.49
MSH5-208ENST00000429846 ANTXR1Q9H6X2 564 aa18.11■□□□□ 0.49
MSH5-208ENST00000429846 RPTORQ8N122 1335 aa18.1■□□□□ 0.49
MSH5-208ENST00000429846 HMMRO75330 724 aa18.1■□□□□ 0.49
MSH5-208ENST00000429846 GH2P01242 217 aa18.1■□□□□ 0.49
MSH5-208ENST00000429846 MAPK4P31152 587 aa18.1■□□□□ 0.49
MSH5-208ENST00000429846 SHROOM1Q2M3G4 852 aaPredicted RBP18.1■□□□□ 0.49
MSH5-208ENST00000429846 CHRDL2Q6WN34 429 aa18.1■□□□□ 0.49
MSH5-208ENST00000429846 RPAP2Q8IXW5 612 aaPredicted RBP18.1■□□□□ 0.49
MSH5-208ENST00000429846 CLASRPQ8N2M8 674 aaKnown RBP18.1■□□□□ 0.49
MSH5-208ENST00000429846 ANKLE1Q8NAG6 615 aa18.1■□□□□ 0.49
MSH5-208ENST00000429846 P2RX7Q99572 595 aaKnown RBP18.1■□□□□ 0.49
MSH5-208ENST00000429846 NDUFB9Q9Y6M9 179 aa18.1■□□□□ 0.49
MSH5-208ENST00000429846 XRCC5P13010 732 aaKnown RBP18.09■□□□□ 0.49
MSH5-208ENST00000429846 USP14P54578 494 aa18.09■□□□□ 0.49
MSH5-208ENST00000429846 PDE3AQ14432 1141 aa18.09■□□□□ 0.49
MSH5-208ENST00000429846 TRMT44Q8IYL2 757 aaKnown RBP18.09■□□□□ 0.49
MSH5-208ENST00000429846 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.09■□□□□ 0.49
MSH5-208ENST00000429846 KIF1BPQ96EK5 621 aa18.09■□□□□ 0.49
MSH5-208ENST00000429846 FEZ1Q99689 392 aa18.09■□□□□ 0.49
MSH5-208ENST00000429846 NUDT12Q9BQG2 462 aa18.09■□□□□ 0.49
MSH5-208ENST00000429846 RIOK1Q9BRS2 568 aaKnown RBP18.09■□□□□ 0.49
MSH5-208ENST00000429846 TXNRD2Q9NNW7 524 aa18.09■□□□□ 0.49
MSH5-208ENST00000429846 HMX1Q9NP08 348 aaPredicted RBP18.09■□□□□ 0.49
MSH5-208ENST00000429846 DDX19BQ9UMR2 479 aa18.09■□□□□ 0.49
MSH5-208ENST00000429846 ALPK3Q96L96 1907 aa18.08■□□□□ 0.49
MSH5-208ENST00000429846 ERVK-9P63128 1117 aa18.08■□□□□ 0.48
MSH5-208ENST00000429846 ERVK-24P63145 666 aa18.08■□□□□ 0.48
MSH5-208ENST00000429846 CERKLQ49MI3 558 aaPredicted RBP18.08■□□□□ 0.48
MSH5-208ENST00000429846 TRIB2Q92519 343 aa18.08■□□□□ 0.48
MSH5-208ENST00000429846 CHMP4BQ9H444 224 aaKnown RBP18.08■□□□□ 0.48
MSH5-208ENST00000429846 IL1RAPL2Q9NP60 686 aa18.08■□□□□ 0.48
MSH5-208ENST00000429846 EMILIN3Q9NT22 766 aa18.08■□□□□ 0.48
MSH5-208ENST00000429846 MAGEB6P1A0A0J9YX57 407 aa18.07■□□□□ 0.48
MSH5-208ENST00000429846 EVI5O60447 810 aa18.07■□□□□ 0.48
MSH5-208ENST00000429846 ABCB5Q2M3G0 1257 aa18.07■□□□□ 0.48
MSH5-208ENST00000429846 NECAB2Q7Z6G3 386 aa18.07■□□□□ 0.48
MSH5-208ENST00000429846 CCAR1Q8IX12 1150 aaKnown RBP18.07■□□□□ 0.48
MSH5-208ENST00000429846 CRNKL1Q9BZJ0 848 aaKnown RBP18.07■□□□□ 0.48
MSH5-208ENST00000429846 KIAA1683Q9H0B3 1180 aa18.07■□□□□ 0.48
MSH5-208ENST00000429846 CABP5Q9NP86 173 aa18.07■□□□□ 0.48
MSH5-208ENST00000429846 RBPJLQ9UBG7 517 aa18.07■□□□□ 0.48
MSH5-208ENST00000429846 MYH8P13535 1937 aa18.06■□□□□ 0.48
MSH5-208ENST00000429846 USP17L15C9J2P7 530 aa18.06■□□□□ 0.48
MSH5-208ENST00000429846 USP17L13C9JLJ4 530 aa18.06■□□□□ 0.48
MSH5-208ENST00000429846 USP17L11C9JVI0 530 aa18.06■□□□□ 0.48
MSH5-208ENST00000429846 USP17L18D6R9N7 530 aa18.06■□□□□ 0.48
MSH5-208ENST00000429846 USP17L22D6RA61 530 aa18.06■□□□□ 0.48
MSH5-208ENST00000429846 USP17L17D6RBQ6 530 aa18.06■□□□□ 0.48
MSH5-208ENST00000429846 USP17L19D6RCP7 530 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms