RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 CCDC175P0C221 793 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 NTRK3Q16288 839 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 JAKMIP3Q5VZ66 844 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 SLC35F6Q8N357 371 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 RASGRP4Q8TDF6 673 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 SYMPKQ92797 1274 aaKnown RBP14.2□□□□□ -0.14
CDH3-202ENST00000429102 MED15Q96RN5 788 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 HPSEQ9Y251 543 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 RIPOR2Q9Y4F9 1068 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 NFAT5O94916 1531 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 EFCAB8A8MWE9 144 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 AKNAD1Q5T1N1 836 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 NCAPH2Q6IBW4 605 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 ZBTB38Q8NAP3 1195 aaPredicted RBP14.2□□□□□ -0.14
CDH3-202ENST00000429102 PSMB7Q99436 277 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 PPP6R2O75170 966 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 TBC1D8O95759 1140 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 STARD3NLO95772 234 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 KCTD19Q17RG1 926 aaPredicted RBP14.19□□□□□ -0.14
CDH3-202ENST00000429102 NUTM2AQ8IVF1 878 aaPredicted RBP14.19□□□□□ -0.14
CDH3-202ENST00000429102 PIGBQ92521 554 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 SRGAP2O75044 1071 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 CIAO1O76071 339 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 MMP1P03956 469 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 IL2RBP14784 551 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 VEGFAP15692 232 aaPredicted RBP14.19□□□□□ -0.14
CDH3-202ENST00000429102 GYG1P46976 350 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 DYNLL1P63167 89 aaKnown RBP14.19□□□□□ -0.14
CDH3-202ENST00000429102 LONRF2Q1L5Z9 754 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 GOLGA1Q92805 767 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 TRIM66O15016 1216 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 MATR3P43243 847 aaKnown RBP eCLIP14.19□□□□□ -0.14
CDH3-202ENST00000429102 CTSWP56202 376 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 PIK3AP1Q6ZUJ8 805 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 NLRP10Q86W26 655 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 ZNF654Q8IZM8 581 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 BPIFA3Q9BQP9 254 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 NACAP1Q9BZK3 213 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 CALCOCO1Q9P1Z2 691 aa14.19□□□□□ -0.14
CDH3-202ENST00000429102 TRIM75PA6NK02 468 aa14.18□□□□□ -0.14
CDH3-202ENST00000429102 FXR1P51114 621 aaKnown RBP eCLIP14.18□□□□□ -0.14
CDH3-202ENST00000429102 FANCBQ8NB91 859 aa14.18□□□□□ -0.14
CDH3-202ENST00000429102 HDAC6Q9UBN7 1215 aa14.18□□□□□ -0.14
CDH3-202ENST00000429102 PATL2C9JE40 543 aaKnown RBP14.18□□□□□ -0.14
CDH3-202ENST00000429102 FILIP1LQ4L180 1135 aa14.18□□□□□ -0.14
CDH3-202ENST00000429102 FBXO2Q9UK22 296 aaPredicted RBP14.18□□□□□ -0.14
CDH3-202ENST00000429102 PHLPP2Q6ZVD8 1323 aa14.18□□□□□ -0.14
CDH3-202ENST00000429102 GTF2E1P29083 439 aaPredicted RBP14.17□□□□□ -0.14
CDH3-202ENST00000429102 TMEM139Q8IV31 216 aa14.17□□□□□ -0.14
CDH3-202ENST00000429102 TMEM87BQ96K49 555 aa14.17□□□□□ -0.14
CDH3-202ENST00000429102 ISCA1Q9BUE6 129 aa14.17□□□□□ -0.14
CDH3-202ENST00000429102 GSG1L2A8MUP6 293 aa14.17□□□□□ -0.14
CDH3-202ENST00000429102 H3BQF6 201 aa14.17□□□□□ -0.14
CDH3-202ENST00000429102 DZIP3Q86Y13 1208 aaKnown RBP14.17□□□□□ -0.14
CDH3-202ENST00000429102 GSPT2Q8IYD1 628 aaKnown RBP14.17□□□□□ -0.14
CDH3-202ENST00000429102 SYNRGQ9UMZ2 1314 aa14.17□□□□□ -0.14
CDH3-202ENST00000429102 TNKSO95271 1327 aa14.17□□□□□ -0.14
CDH3-202ENST00000429102 PCCAP05165 728 aaPredicted RBP14.17□□□□□ -0.14
CDH3-202ENST00000429102 TPM1P09493 284 aa14.17□□□□□ -0.14
CDH3-202ENST00000429102 CAPN2P17655 700 aa14.17□□□□□ -0.14
CDH3-202ENST00000429102 TTF1Q15361 905 aaPredicted RBP14.17□□□□□ -0.14
CDH3-202ENST00000429102 TRIM49BA6NDI0 452 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 RNF225M0QZC1 329 aaPredicted RBP14.16□□□□□ -0.14
CDH3-202ENST00000429102 GPS2Q13227 327 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 PNKPQ96T60 521 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 GDAQ9Y2T3 454 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 SLIT1O75093 1534 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 STX10O60499 249 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 PTPREP23469 700 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 CYP2C19P33261 490 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 NLRP5P59047 1200 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 DHX37Q8IY37 1157 aaKnown RBP14.16□□□□□ -0.14
CDH3-202ENST00000429102 MLKLQ8NB16 471 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 POLD4Q9HCU8 107 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 ABCB6Q9NP58 842 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.16□□□□□ -0.14
CDH3-202ENST00000429102 MRFAP1Q9Y605 127 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 PCDH11XQ9BZA7 1347 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 PCDH11YQ9BZA8 1340 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 FMNL1O95466 1100 aaPredicted RBP14.16□□□□□ -0.14
CDH3-202ENST00000429102 KRT9P35527 623 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 PTGDRQ13258 359 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 ZSCAN26Q16670 478 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 CRACR2BQ8N4Y2 399 aaPredicted RBP14.16□□□□□ -0.14
CDH3-202ENST00000429102 CHP1Q99653 195 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 DACH1Q9UI36 760 aa14.16□□□□□ -0.14
CDH3-202ENST00000429102 PP2D1A8MPX8 630 aa14.15□□□□□ -0.14
CDH3-202ENST00000429102 SLC5A1P13866 664 aa14.15□□□□□ -0.14
CDH3-202ENST00000429102 MAP3K9P80192 1104 aa14.15□□□□□ -0.14
CDH3-202ENST00000429102 UBXN1Q04323 297 aa14.15□□□□□ -0.14
CDH3-202ENST00000429102 DPYDQ12882 1025 aa14.15□□□□□ -0.14
CDH3-202ENST00000429102 RILPL1Q5EBL4 403 aa14.15□□□□□ -0.14
CDH3-202ENST00000429102 IFIT1BQ5T764 474 aaKnown RBP14.15□□□□□ -0.14
CDH3-202ENST00000429102 LCMT1Q9UIC8 334 aa14.15□□□□□ -0.14
CDH3-202ENST00000429102 ADAM21Q9UKJ8 722 aa14.15□□□□□ -0.14
CDH3-202ENST00000429102 FAN1Q9Y2M0 1017 aa14.15□□□□□ -0.14
CDH3-202ENST00000429102 ZRANB2O95218 330 aaKnown RBP eCLIP14.15□□□□□ -0.14
CDH3-202ENST00000429102 ENOX2Q16206 610 aaKnown RBP14.15□□□□□ -0.14
CDH3-202ENST00000429102 DNAJC21Q5F1R6 531 aaKnown RBP14.15□□□□□ -0.14
CDH3-202ENST00000429102 RIN2Q8WYP3 895 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms