RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 C8orf76Q96K31 380 aa16.24■□□□□ 0.19
SYNGAP1-203ENST00000428982 FAM227BQ96M60 508 aa16.24■□□□□ 0.19
SYNGAP1-203ENST00000428982 NFAT5O94916 1531 aa16.24■□□□□ 0.19
SYNGAP1-203ENST00000428982 ATP5JP18859 108 aa16.24■□□□□ 0.19
SYNGAP1-203ENST00000428982 PARP10Q53GL7 1025 aa16.24■□□□□ 0.19
SYNGAP1-203ENST00000428982 CCDC26Q8TAB7 109 aa16.24■□□□□ 0.19
SYNGAP1-203ENST00000428982 C21orf2O43822 256 aa16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 MYBL2P10244 700 aa16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 TCIRG1Q13488 830 aa16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 STIM1Q13586 685 aa16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 CCDC152Q4G0S7 254 aa16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 YIPF3Q9GZM5 350 aa16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 ABCB6Q9NP58 842 aa16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 HELLSQ9NRZ9 838 aa16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 MYO1FO00160 1098 aa16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 IRS4O14654 1257 aaPredicted RBP16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 CAPRIN2Q6IMN6 1127 aaKnown RBP16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 RIPOR2Q9Y4F9 1068 aa16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 A6NNZ2 444 aa16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 FAM160A1Q05DH4 1040 aa16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 TUBB8Q3ZCM7 444 aa16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 CCDC40Q4G0X9 1142 aa16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 SUCLG2Q96I99 432 aa16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 PRPHP41219 470 aa16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 FKBP4Q02790 459 aaKnown RBP eCLIP16.23■□□□□ 0.19
SYNGAP1-203ENST00000428982 IFIT1P09914 478 aaKnown RBP16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 IL15P40933 162 aaPredicted RBP16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 SARM1Q6SZW1 724 aa16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 SEPT12Q8IYM1 358 aa16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 PPP1R12BO60237 982 aaPredicted RBP16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 N4BP1O75113 896 aaKnown RBP16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 SLC3A2P08195 630 aaKnown RBP16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 E4F1Q66K89 784 aaPredicted RBP16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 FAM89AQ96GI7 184 aa16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 NYXQ9GZU5 481 aa16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 SPATA31A5Q5VU36 1347 aa16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 SPATA31A7Q8IWB4 1347 aa16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 ZFYP08048 801 aaPredicted RBP16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 CCNHP51946 323 aaPredicted RBP16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 ADCK5Q3MIX3 580 aa16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 KIRREL3Q8IZU9 778 aa16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 MIPOL1Q8TD10 442 aa16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 TCEANC2Q96MN5 208 aa16.22■□□□□ 0.19
SYNGAP1-203ENST00000428982 OPA1O60313 960 aa16.21■□□□□ 0.19
SYNGAP1-203ENST00000428982 IL6STP40189 918 aaPredicted RBP16.21■□□□□ 0.19
SYNGAP1-203ENST00000428982 TRAPPC3LQ5T215 181 aa16.21■□□□□ 0.19
SYNGAP1-203ENST00000428982 BAIAP2L1Q9UHR4 511 aa16.21■□□□□ 0.19
SYNGAP1-203ENST00000428982 UBASH3AP57075 661 aa16.21■□□□□ 0.19
SYNGAP1-203ENST00000428982 KCNB2Q92953 911 aa16.21■□□□□ 0.19
SYNGAP1-203ENST00000428982 GJD4Q96KN9 370 aaPredicted RBP16.21■□□□□ 0.19
SYNGAP1-203ENST00000428982 FAM173BQ6P4H8 233 aa16.21■□□□□ 0.19
SYNGAP1-203ENST00000428982 BARGINQ6ZT62 677 aa16.21■□□□□ 0.19
SYNGAP1-203ENST00000428982 SMARCC2Q8TAQ2 1214 aa16.21■□□□□ 0.19
SYNGAP1-203ENST00000428982 XPO4Q9C0E2 1151 aaKnown RBP16.21■□□□□ 0.19
SYNGAP1-203ENST00000428982 ZBTB1Q9Y2K1 713 aa16.21■□□□□ 0.19
SYNGAP1-203ENST00000428982 SH3TC1Q8TE82 1336 aa16.21■□□□□ 0.18
SYNGAP1-203ENST00000428982 NKX1-1Q15270 411 aaPredicted RBP16.21■□□□□ 0.18
SYNGAP1-203ENST00000428982 FAM196AQ6ZSG2 479 aa16.21■□□□□ 0.18
SYNGAP1-203ENST00000428982 SMIM24O75264 130 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 KIF5BP33176 963 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 SRGAP1Q7Z6B7 1085 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 ZKSCAN4Q969J2 545 aaPredicted RBP16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 EAF2Q96CJ1 260 aaPredicted RBP16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 TRIM4Q9C037 500 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 BATF3Q9NR55 127 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 RFX7Q2KHR2 1363 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 PPFIA1Q13136 1202 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 TPTE2Q6XPS3 522 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 BRAPQ7Z569 592 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 INCENPQ9NQS7 918 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 MCM8Q9UJA3 840 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 MAP3K15Q6ZN16 1313 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 CTAGE9A4FU28 777 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 CRKLP46109 303 aaKnown RBP16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 ZRSR2Q15696 482 aaKnown RBP16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 FAM182BQ5T319 152 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 SPDYE1Q8NFV5 336 aaPredicted RBP16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 WASF1Q92558 559 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 TBC1D31Q96DN5 1066 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 NLRP3Q96P20 1036 aa16.2■□□□□ 0.18
SYNGAP1-203ENST00000428982 PTPDC1A2A3K4 754 aa16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 TNNI3KQ59H18 835 aa16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 TRIM74Q86UV6 250 aa16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 TRIM73Q86UV7 250 aa16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 FPGT-TNNI3KV9GXZ4 949 aa16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 PALLDQ8WX93 1383 aa16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 LARGE1O95461 756 aa16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 SLC5A1P13866 664 aa16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 LMOD1P29536 600 aaPredicted RBP16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 TSGA10IPQ3SY00 556 aa16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 PREPLQ4J6C6 727 aaPredicted RBP16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 FILIP1LQ4L180 1135 aa16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 KRT27Q7Z3Y8 459 aa16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 ARHGAP6O43182 974 aa16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 SLC30A9Q6PML9 568 aa16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 RPGRQ92834 1020 aaKnown RBP16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 LZTFL1Q9NQ48 299 aa16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 A1CFQ9NQ94 594 aaKnown RBP16.19■□□□□ 0.18
SYNGAP1-203ENST00000428982 LTN1O94822 1766 aa16.18■□□□□ 0.18
SYNGAP1-203ENST00000428982 DDX46Q7L014 1031 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms