RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 CDK5RAP2Q96SN8 1893 aa22.48■■□□□ 1.19
UPK3BP1-201ENST00000428678 DLL1O00548 723 aa22.48■■□□□ 1.19
UPK3BP1-201ENST00000428678 GDF11O95390 407 aa22.48■■□□□ 1.19
UPK3BP1-201ENST00000428678 PRKAR2AP13861 404 aaKnown RBP22.48■■□□□ 1.19
UPK3BP1-201ENST00000428678 HOXA7P31268 230 aaPredicted RBP22.48■■□□□ 1.19
UPK3BP1-201ENST00000428678 MNX1P50219 401 aaPredicted RBP22.48■■□□□ 1.19
UPK3BP1-201ENST00000428678 JAG1P78504 1218 aa22.48■■□□□ 1.19
UPK3BP1-201ENST00000428678 PDE3AQ14432 1141 aa22.48■■□□□ 1.19
UPK3BP1-201ENST00000428678 TTC39AQ5SRH9 613 aa22.48■■□□□ 1.19
UPK3BP1-201ENST00000428678 SOCS4Q8WXH5 440 aa22.48■■□□□ 1.19
UPK3BP1-201ENST00000428678 DNAJC18Q9H819 358 aa22.48■■□□□ 1.19
UPK3BP1-201ENST00000428678 TXNRD2Q9NNW7 524 aa22.48■■□□□ 1.19
UPK3BP1-201ENST00000428678 OGDHLQ9ULD0 1010 aa22.48■■□□□ 1.19
UPK3BP1-201ENST00000428678 FLT1P17948 1338 aa22.48■■□□□ 1.19
UPK3BP1-201ENST00000428678 IPO8O15397 1037 aaKnown RBP22.47■■□□□ 1.19
UPK3BP1-201ENST00000428678 SHROOM1Q2M3G4 852 aaPredicted RBP22.47■■□□□ 1.19
UPK3BP1-201ENST00000428678 CCAR1Q8IX12 1150 aaKnown RBP22.47■■□□□ 1.19
UPK3BP1-201ENST00000428678 FOCADQ5VW36 1801 aa22.46■■□□□ 1.19
UPK3BP1-201ENST00000428678 C19orf81C9J6K1 198 aa22.46■■□□□ 1.19
UPK3BP1-201ENST00000428678 USP17L10C9JJH3 530 aa22.46■■□□□ 1.19
UPK3BP1-201ENST00000428678 ZKSCAN1P17029 563 aaPredicted RBP22.46■■□□□ 1.19
UPK3BP1-201ENST00000428678 MAGEA10P43363 369 aaPredicted RBP22.46■■□□□ 1.19
UPK3BP1-201ENST00000428678 MAP3K21Q5TCX8 1036 aa22.46■■□□□ 1.19
UPK3BP1-201ENST00000428678 FOXP4Q8IVH2 680 aaPredicted RBP22.46■■□□□ 1.19
UPK3BP1-201ENST00000428678 SAP30BPQ9UHR5 308 aaKnown RBP22.46■■□□□ 1.19
UPK3BP1-201ENST00000428678 PALD1Q9ULE6 856 aa22.46■■□□□ 1.19
UPK3BP1-201ENST00000428678 ZBTB21Q9ULJ3 1066 aa22.46■■□□□ 1.19
UPK3BP1-201ENST00000428678 TNNQ9UQP3 1299 aa22.46■■□□□ 1.19
UPK3BP1-201ENST00000428678 DNAH12Q6ZR08 3092 aa22.46■■□□□ 1.19
UPK3BP1-201ENST00000428678 XRCC5P13010 732 aaKnown RBP22.45■■□□□ 1.18
UPK3BP1-201ENST00000428678 TRIM27P14373 513 aa22.45■■□□□ 1.18
UPK3BP1-201ENST00000428678 MAPK4P31152 587 aa22.45■■□□□ 1.18
UPK3BP1-201ENST00000428678 PPP4CP60510 307 aa22.45■■□□□ 1.18
UPK3BP1-201ENST00000428678 OS9Q13438 667 aaPredicted RBP22.45■■□□□ 1.18
UPK3BP1-201ENST00000428678 CCDC158Q5M9N0 1113 aa22.45■■□□□ 1.18
UPK3BP1-201ENST00000428678 ADGRA1Q86SQ6 560 aa22.45■■□□□ 1.18
UPK3BP1-201ENST00000428678 FRAT1Q92837 279 aaPredicted RBP22.45■■□□□ 1.18
UPK3BP1-201ENST00000428678 PAGR1Q9BTK6 254 aa22.45■■□□□ 1.18
UPK3BP1-201ENST00000428678 RBPJLQ9UBG7 517 aa22.45■■□□□ 1.18
UPK3BP1-201ENST00000428678 MYO5AQ9Y4I1 1855 aaKnown RBP22.45■■□□□ 1.18
UPK3BP1-201ENST00000428678 ERVK-9P63128 1117 aa22.44■■□□□ 1.18
UPK3BP1-201ENST00000428678 ERVK-24P63145 666 aa22.44■■□□□ 1.18
UPK3BP1-201ENST00000428678 TNNI3KQ59H18 835 aa22.44■■□□□ 1.18
UPK3BP1-201ENST00000428678 METTL16Q86W50 562 aaKnown RBP22.44■■□□□ 1.18
UPK3BP1-201ENST00000428678 TRMT44Q8IYL2 757 aaKnown RBP22.44■■□□□ 1.18
UPK3BP1-201ENST00000428678 CLUAP1Q96AJ1 413 aa22.44■■□□□ 1.18
UPK3BP1-201ENST00000428678 DBNDD2Q9BQY9 259 aa22.44■■□□□ 1.18
UPK3BP1-201ENST00000428678 GINM1Q9NU53 330 aa22.44■■□□□ 1.18
UPK3BP1-201ENST00000428678 FPGT-TNNI3KV9GXZ4 949 aa22.44■■□□□ 1.18
UPK3BP1-201ENST00000428678 PFASO15067 1338 aa22.43■■□□□ 1.18
UPK3BP1-201ENST00000428678 CYP2E1P05181 493 aaPredicted RBP22.43■■□□□ 1.18
UPK3BP1-201ENST00000428678 HLA-DOAP06340 250 aa22.43■■□□□ 1.18
UPK3BP1-201ENST00000428678 CACNB2Q08289 660 aaPredicted RBP22.43■■□□□ 1.18
UPK3BP1-201ENST00000428678 ATF7IPQ6VMQ6 1270 aa22.43■■□□□ 1.18
UPK3BP1-201ENST00000428678 DEFB123Q8N688 67 aa22.43■■□□□ 1.18
UPK3BP1-201ENST00000428678 GTF3C2Q8WUA4 911 aaPredicted RBP22.43■■□□□ 1.18
UPK3BP1-201ENST00000428678 PORCNQ9H237 461 aa22.43■■□□□ 1.18
UPK3BP1-201ENST00000428678 CWC22Q9HCG8 908 aaKnown RBP22.43■■□□□ 1.18
UPK3BP1-201ENST00000428678 RGS2P41220 211 aa22.42■■□□□ 1.18
UPK3BP1-201ENST00000428678 Q3C1V9 767 aa22.42■■□□□ 1.18
UPK3BP1-201ENST00000428678 GPR153Q6NV75 609 aa22.42■■□□□ 1.18
UPK3BP1-201ENST00000428678 GPR142Q7Z601 462 aa22.42■■□□□ 1.18
UPK3BP1-201ENST00000428678 UBE2OQ9C0C9 1292 aaKnown RBP22.42■■□□□ 1.18
UPK3BP1-201ENST00000428678 GPR108Q9NPR9 543 aa22.42■■□□□ 1.18
UPK3BP1-201ENST00000428678 LAMA2P24043 3122 aaKnown RBP22.42■■□□□ 1.18
UPK3BP1-201ENST00000428678 CCL14Q16627 93 aa22.41■■□□□ 1.18
UPK3BP1-201ENST00000428678 USP17L2Q6R6M4 530 aa22.41■■□□□ 1.18
UPK3BP1-201ENST00000428678 Q7L0L9 218 aa22.41■■□□□ 1.18
UPK3BP1-201ENST00000428678 PLEKHH3Q7Z736 793 aa22.41■■□□□ 1.18
UPK3BP1-201ENST00000428678 TDHQ8IZJ6 230 aa22.41■■□□□ 1.18
UPK3BP1-201ENST00000428678 USP6NLQ92738 828 aa22.41■■□□□ 1.18
UPK3BP1-201ENST00000428678 EMILIN3Q9NT22 766 aa22.41■■□□□ 1.18
UPK3BP1-201ENST00000428678 BCAR3O75815 825 aa22.4■■□□□ 1.18
UPK3BP1-201ENST00000428678 GH2P01242 217 aa22.4■■□□□ 1.18
UPK3BP1-201ENST00000428678 CCND3P30281 292 aaPredicted RBP22.4■■□□□ 1.18
UPK3BP1-201ENST00000428678 ZAP70P43403 619 aa22.4■■□□□ 1.18
UPK3BP1-201ENST00000428678 DYNLL1P63167 89 aaKnown RBP22.4■■□□□ 1.18
UPK3BP1-201ENST00000428678 ZYXQ15942 572 aaKnown RBP22.4■■□□□ 1.18
UPK3BP1-201ENST00000428678 LRIT3Q3SXY7 679 aa22.4■■□□□ 1.18
UPK3BP1-201ENST00000428678 MORN1Q5T089 497 aa22.4■■□□□ 1.18
UPK3BP1-201ENST00000428678 FEZ1Q99689 392 aa22.4■■□□□ 1.18
UPK3BP1-201ENST00000428678 APBA2Q99767 749 aa22.4■■□□□ 1.18
UPK3BP1-201ENST00000428678 PIH1D3Q9NQM4 214 aaKnown RBP22.4■■□□□ 1.18
UPK3BP1-201ENST00000428678 MYH1P12882 1939 aa22.39■■□□□ 1.18
UPK3BP1-201ENST00000428678 COL6A1P12109 1028 aa22.38■■□□□ 1.17
UPK3BP1-201ENST00000428678 CYP7A1P22680 504 aa22.38■■□□□ 1.17
UPK3BP1-201ENST00000428678 POLA2Q14181 598 aa22.38■■□□□ 1.17
UPK3BP1-201ENST00000428678 LHX8Q68G74 356 aa22.38■■□□□ 1.17
UPK3BP1-201ENST00000428678 POTEEQ6S8J3 1075 aa22.38■■□□□ 1.17
UPK3BP1-201ENST00000428678 SURF6O75683 361 aaKnown RBP22.37■■□□□ 1.17
UPK3BP1-201ENST00000428678 LRRC26Q2I0M4 334 aa22.37■■□□□ 1.17
UPK3BP1-201ENST00000428678 WDR78Q5VTH9 848 aa22.37■■□□□ 1.17
UPK3BP1-201ENST00000428678 TMEM57Q8N5G2 664 aa22.37■■□□□ 1.17
UPK3BP1-201ENST00000428678 ZNF512BQ96KM6 892 aaPredicted RBP22.37■■□□□ 1.17
UPK3BP1-201ENST00000428678 RABGAP1Q9Y3P9 1069 aa22.37■■□□□ 1.17
UPK3BP1-201ENST00000428678 NDUFB9Q9Y6M9 179 aa22.37■■□□□ 1.17
UPK3BP1-201ENST00000428678 UNC80Q8N2C7 3258 aa22.36■■□□□ 1.17
UPK3BP1-201ENST00000428678 USP17L15C9J2P7 530 aa22.36■■□□□ 1.17
UPK3BP1-201ENST00000428678 USP17L13C9JLJ4 530 aa22.36■■□□□ 1.17
UPK3BP1-201ENST00000428678 USP17L11C9JVI0 530 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms