RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 DHX32Q7L7V1 743 aaKnown RBP9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 CHST3Q7LGC8 479 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 ZNF444Q8N0Y2 327 aaPredicted RBP9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 IL17RAQ96F46 866 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 CDCA5Q96FF9 252 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 DNAJC18Q9H819 358 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 ZSWIM6Q9HCJ5 1215 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 PDRG1Q9NUG6 133 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 PGAP2Q9UHJ9 254 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 FOCADQ5VW36 1801 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 ECM29Q5VYK3 1845 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 SSC5DA1L4H1 1573 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 ERICH2A1L162 156 aa9.32□□□□□ -0.92
HMGA1P4-201ENST00000428643 GDF11O95390 407 aa9.32□□□□□ -0.92
HMGA1P4-201ENST00000428643 FGRP09769 529 aa9.32□□□□□ -0.92
HMGA1P4-201ENST00000428643 AKR1B1P15121 316 aa9.32□□□□□ -0.92
HMGA1P4-201ENST00000428643 NT5C2P49902 561 aa9.32□□□□□ -0.92
HMGA1P4-201ENST00000428643 ANTXR2P58335 489 aa9.32□□□□□ -0.92
HMGA1P4-201ENST00000428643 COL9A3Q14050 684 aaPredicted RBP9.32□□□□□ -0.92
HMGA1P4-201ENST00000428643 TTLL12Q14166 644 aaPredicted RBP9.32□□□□□ -0.92
HMGA1P4-201ENST00000428643 CERKLQ49MI3 558 aaPredicted RBP9.32□□□□□ -0.92
HMGA1P4-201ENST00000428643 TMEM67Q5HYA8 995 aa9.32□□□□□ -0.92
HMGA1P4-201ENST00000428643 NOL8Q76FK4 1167 aaKnown RBP9.32□□□□□ -0.92
HMGA1P4-201ENST00000428643 IQCA1Q86XH1 822 aa9.32□□□□□ -0.92
HMGA1P4-201ENST00000428643 ZKSCAN3Q9BRR0 538 aa9.32□□□□□ -0.92
HMGA1P4-201ENST00000428643 ZNF341Q9BYN7 854 aa9.32□□□□□ -0.92
HMGA1P4-201ENST00000428643 LRRC2Q9BYS8 371 aa9.32□□□□□ -0.92
HMGA1P4-201ENST00000428643 TNKSO95271 1327 aa9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 WDR19Q8NEZ3 1342 aa9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 BAZ2AQ9UIF9 1905 aaKnown RBP9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 TRAF5O00463 557 aa9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 IFIT3O14879 490 aaKnown RBP9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 TBC1D12O60347 775 aa9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 PRKG1Q13976 671 aa9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 ABCB5Q2M3G0 1257 aa9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 CHADLQ6NUI6 762 aa9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 NFXL1Q6ZNB6 911 aa9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 Q6ZUG5 572 aa9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 METTL16Q86W50 562 aaKnown RBP9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 NKX2-3Q8TAU0 364 aa9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 CCDC17Q96LX7 622 aa9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 WRNIP1Q96S55 665 aa9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 ZSCAN10Q96SZ4 725 aaPredicted RBP9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 ZNF408Q9H9D4 720 aa9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 ZSWIM5Q9P217 1185 aa9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 NAP1L2Q9ULW6 460 aaPredicted RBP9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 CDK5RAP2Q96SN8 1893 aa9.31□□□□□ -0.92
HMGA1P4-201ENST00000428643 PLIN4Q96Q06 1357 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 SH2B2O14492 632 aaPredicted RBP9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 PPP1R12BO60237 982 aaPredicted RBP9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 NMT2O60551 498 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 GH2P01242 217 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 AK2P54819 239 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 EXOSC10Q01780 885 aaKnown RBP9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 ATP2B2Q01814 1243 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 ICA1Q05084 483 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 WTAPQ15007 396 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 RAB3GAP1Q15042 981 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 ANKRD1Q15327 319 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 SHROOM1Q2M3G4 852 aaPredicted RBP9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 TATDN1Q6P1N9 297 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 TMEM179Q6ZVK1 233 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 CLEC10AQ8IUN9 316 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 HSCBQ8IWL3 235 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 NEDD1Q8NHV4 660 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 BRF1Q92994 677 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 TMEM87BQ96K49 555 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 CABP5Q9NP86 173 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 GPHNQ9NQX3 736 aaPredicted RBP9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 ZBTB21Q9ULJ3 1066 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 STX8Q9UNK0 236 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 ANGEL1Q9UNK9 670 aaKnown RBP9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 FZD1Q9UP38 647 aa9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 RBM19Q9Y4C8 960 aaKnown RBP9.3□□□□□ -0.92
HMGA1P4-201ENST00000428643 MYH1P12882 1939 aa9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 GOLGA8BA8MQT2 603 aa9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 PHF20L1A8MW92 1017 aa9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 KIF3CO14782 793 aa9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 INPP5BP32019 993 aa9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 CAP2P40123 477 aa9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 IREB2P48200 963 aaKnown RBP9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 MAP3K10Q02779 954 aa9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 RRP1BQ14684 758 aaKnown RBP9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 CCDC178Q5BJE1 867 aa9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 IFIT1BQ5T764 474 aaKnown RBP9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 ENAHQ8N8S7 591 aaPredicted RBP9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 IL27Q8NEV9 243 aa9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 CEP95Q96GE4 821 aa9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 TTC14Q96N46 770 aa9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 LARP6Q9BRS8 491 aaKnown RBP9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 PICK1Q9NRD5 415 aa9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.29□□□□□ -0.92
HMGA1P4-201ENST00000428643 SIPA1L1O43166 1804 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 KLF18A0A0U1RQI7 1052 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 CCDC69A6NI79 296 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 RAD21O60216 631 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 CTNND1O60716 968 aaKnown RBP9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 CELF2O95319 508 aaKnown RBP9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 CD2BP2O95400 341 aaKnown RBP9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 TTLL1O95922 423 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms