RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 USP17L10C9JJH3 530 aa21.24■□□□□ 0.99
DDR1-235ENST00000428153 FARP2O94887 1054 aaPredicted RBP21.24■□□□□ 0.99
DDR1-235ENST00000428153 ELNP15502 786 aa21.24■□□□□ 0.99
DDR1-235ENST00000428153 CYP7A1P22680 504 aa21.24■□□□□ 0.99
DDR1-235ENST00000428153 FXR1P51114 621 aaKnown RBP eCLIP21.24■□□□□ 0.99
DDR1-235ENST00000428153 MTMR2Q13614 643 aa21.24■□□□□ 0.99
DDR1-235ENST00000428153 HSP90AB4PQ58FF6 505 aa21.24■□□□□ 0.99
DDR1-235ENST00000428153 GTF3C2Q8WUA4 911 aaPredicted RBP21.24■□□□□ 0.99
DDR1-235ENST00000428153 DPF3Q92784 378 aa21.24■□□□□ 0.99
DDR1-235ENST00000428153 CCDC8Q9H0W5 538 aaPredicted RBP21.24■□□□□ 0.99
DDR1-235ENST00000428153 TLR7Q9NYK1 1049 aaKnown RBP21.24■□□□□ 0.99
DDR1-235ENST00000428153 PALD1Q9ULE6 856 aa21.24■□□□□ 0.99
DDR1-235ENST00000428153 MS4A1P11836 297 aa21.23■□□□□ 0.99
DDR1-235ENST00000428153 IRX3P78415 501 aaPredicted RBP21.23■□□□□ 0.99
DDR1-235ENST00000428153 CRISPLD2Q9H0B8 497 aa21.23■□□□□ 0.99
DDR1-235ENST00000428153 EHD4Q9H223 541 aa21.23■□□□□ 0.99
DDR1-235ENST00000428153 ZBTB21Q9ULJ3 1066 aa21.23■□□□□ 0.99
DDR1-235ENST00000428153 NR2E3Q9Y5X4 410 aa21.23■□□□□ 0.99
DDR1-235ENST00000428153 IDH1O75874 414 aaKnown RBP21.22■□□□□ 0.99
DDR1-235ENST00000428153 HMGCRP04035 888 aa21.22■□□□□ 0.99
DDR1-235ENST00000428153 MAP3K12Q12852 859 aa21.22■□□□□ 0.99
DDR1-235ENST00000428153 GJD2Q9UKL4 321 aa21.22■□□□□ 0.99
DDR1-235ENST00000428153 TATDN1Q6P1N9 297 aa21.21■□□□□ 0.99
DDR1-235ENST00000428153 HERVK_113P62684 666 aa21.2■□□□□ 0.98
DDR1-235ENST00000428153 DYNLL1P63167 89 aaKnown RBP21.2■□□□□ 0.98
DDR1-235ENST00000428153 JAG1P78504 1218 aa21.2■□□□□ 0.98
DDR1-235ENST00000428153 TTF1Q15361 905 aaPredicted RBP21.2■□□□□ 0.98
DDR1-235ENST00000428153 TTC6Q86TZ1 520 aa21.2■□□□□ 0.98
DDR1-235ENST00000428153 MIER1Q8N108 512 aa21.2■□□□□ 0.98
DDR1-235ENST00000428153 ANKLE1Q8NAG6 615 aa21.2■□□□□ 0.98
DDR1-235ENST00000428153 DEFB118Q96PH6 123 aa21.2■□□□□ 0.98
DDR1-235ENST00000428153 SERPINB13Q9UIV8 391 aa21.2■□□□□ 0.98
DDR1-235ENST00000428153 MYH1P12882 1939 aa21.19■□□□□ 0.98
DDR1-235ENST00000428153 SZT2Q5T011 3432 aa21.19■□□□□ 0.98
DDR1-235ENST00000428153 GDF11O95390 407 aa21.19■□□□□ 0.98
DDR1-235ENST00000428153 TFRCP02786 760 aaKnown RBP21.19■□□□□ 0.98
DDR1-235ENST00000428153 XRCC5P13010 732 aaKnown RBP21.19■□□□□ 0.98
DDR1-235ENST00000428153 USP5P45974 858 aa21.19■□□□□ 0.98
DDR1-235ENST00000428153 USP17L2Q6R6M4 530 aa21.19■□□□□ 0.98
DDR1-235ENST00000428153 AACSQ86V21 672 aa21.19■□□□□ 0.98
DDR1-235ENST00000428153 MAGEB6Q8N7X4 407 aa21.19■□□□□ 0.98
DDR1-235ENST00000428153 GPRC5AQ8NFJ5 357 aa21.19■□□□□ 0.98
DDR1-235ENST00000428153 SOCS4Q8WXH5 440 aa21.19■□□□□ 0.98
DDR1-235ENST00000428153 C12orf42Q96LP6 360 aa21.19■□□□□ 0.98
DDR1-235ENST00000428153 P2RX7Q99572 595 aaKnown RBP21.19■□□□□ 0.98
DDR1-235ENST00000428153 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.19■□□□□ 0.98
DDR1-235ENST00000428153 MAPK4P31152 587 aa21.18■□□□□ 0.98
DDR1-235ENST00000428153 TRMT44Q8IYL2 757 aaKnown RBP21.18■□□□□ 0.98
DDR1-235ENST00000428153 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.18■□□□□ 0.98
DDR1-235ENST00000428153 SAP30BPQ9UHR5 308 aaKnown RBP21.18■□□□□ 0.98
DDR1-235ENST00000428153 TAOK2Q9UL54 1235 aa21.18■□□□□ 0.98
DDR1-235ENST00000428153 EXOC6BQ9Y2D4 811 aa21.18■□□□□ 0.98
DDR1-235ENST00000428153 RPTORQ8N122 1335 aa21.18■□□□□ 0.98
DDR1-235ENST00000428153 DIEXFQ68CQ4 756 aaKnown RBP21.17■□□□□ 0.98
DDR1-235ENST00000428153 RPAP2Q8IXW5 612 aaPredicted RBP21.17■□□□□ 0.98
DDR1-235ENST00000428153 MIGA1Q8NAN2 632 aa21.17■□□□□ 0.98
DDR1-235ENST00000428153 NUDT12Q9BQG2 462 aa21.17■□□□□ 0.98
DDR1-235ENST00000428153 HMX1Q9NP08 348 aaPredicted RBP21.17■□□□□ 0.98
DDR1-235ENST00000428153 PLXNB2O15031 1838 aa21.16■□□□□ 0.98
DDR1-235ENST00000428153 GH2P01242 217 aa21.16■□□□□ 0.98
DDR1-235ENST00000428153 USP14P54578 494 aa21.16■□□□□ 0.98
DDR1-235ENST00000428153 CHRDL2Q6WN34 429 aa21.16■□□□□ 0.98
DDR1-235ENST00000428153 RHPN1Q8TCX5 695 aa21.16■□□□□ 0.98
DDR1-235ENST00000428153 KIF1BPQ96EK5 621 aa21.16■□□□□ 0.98
DDR1-235ENST00000428153 RIOK1Q9BRS2 568 aaKnown RBP21.16■□□□□ 0.98
DDR1-235ENST00000428153 PRO3102Q9H379 93 aa21.16■□□□□ 0.98
DDR1-235ENST00000428153 ANTXR1Q9H6X2 564 aa21.16■□□□□ 0.98
DDR1-235ENST00000428153 EMILIN3Q9NT22 766 aa21.16■□□□□ 0.98
DDR1-235ENST00000428153 RBPJLQ9UBG7 517 aa21.16■□□□□ 0.98
DDR1-235ENST00000428153 HMMRO75330 724 aa21.15■□□□□ 0.98
DDR1-235ENST00000428153 ERVK-9P63128 1117 aa21.15■□□□□ 0.98
DDR1-235ENST00000428153 ERVK-24P63145 666 aa21.15■□□□□ 0.98
DDR1-235ENST00000428153 SHROOM1Q2M3G4 852 aaPredicted RBP21.15■□□□□ 0.98
DDR1-235ENST00000428153 MAP3K21Q5TCX8 1036 aa21.15■□□□□ 0.98
DDR1-235ENST00000428153 NECAB2Q7Z6G3 386 aa21.15■□□□□ 0.98
DDR1-235ENST00000428153 CLASRPQ8N2M8 674 aaKnown RBP21.15■□□□□ 0.98
DDR1-235ENST00000428153 PANK1Q8TE04 598 aa21.15■□□□□ 0.98
DDR1-235ENST00000428153 KIAA1683Q9H0B3 1180 aa21.15■□□□□ 0.98
DDR1-235ENST00000428153 CHMP4BQ9H444 224 aaKnown RBP21.15■□□□□ 0.98
DDR1-235ENST00000428153 TXNRD2Q9NNW7 524 aa21.15■□□□□ 0.98
DDR1-235ENST00000428153 A0A1W2PPC1 479 aa21.14■□□□□ 0.97
DDR1-235ENST00000428153 PDE3AQ14432 1141 aa21.14■□□□□ 0.97
DDR1-235ENST00000428153 CERKLQ49MI3 558 aaPredicted RBP21.14■□□□□ 0.97
DDR1-235ENST00000428153 DDX19BQ9UMR2 479 aa21.14■□□□□ 0.97
DDR1-235ENST00000428153 RABGAP1Q9Y3P9 1069 aa21.14■□□□□ 0.97
DDR1-235ENST00000428153 DDX60LQ5H9U9 1706 aaKnown RBP21.13■□□□□ 0.97
DDR1-235ENST00000428153 USP17L15C9J2P7 530 aa21.13■□□□□ 0.97
DDR1-235ENST00000428153 USP17L13C9JLJ4 530 aa21.13■□□□□ 0.97
DDR1-235ENST00000428153 USP17L11C9JVI0 530 aa21.13■□□□□ 0.97
DDR1-235ENST00000428153 USP17L18D6R9N7 530 aa21.13■□□□□ 0.97
DDR1-235ENST00000428153 USP17L22D6RA61 530 aa21.13■□□□□ 0.97
DDR1-235ENST00000428153 USP17L17D6RBQ6 530 aa21.13■□□□□ 0.97
DDR1-235ENST00000428153 USP17L19D6RCP7 530 aa21.13■□□□□ 0.97
DDR1-235ENST00000428153 USP17L20D6RJB6 530 aa21.13■□□□□ 0.97
DDR1-235ENST00000428153 EVI5O60447 810 aa21.13■□□□□ 0.97
DDR1-235ENST00000428153 USP17L24Q0WX57 530 aa21.13■□□□□ 0.97
DDR1-235ENST00000428153 LBX2Q6XYB7 198 aa21.13■□□□□ 0.97
DDR1-235ENST00000428153 TRIB2Q92519 343 aa21.13■□□□□ 0.97
DDR1-235ENST00000428153 USP6NLQ92738 828 aa21.13■□□□□ 0.97
DDR1-235ENST00000428153 CABP5Q9NP86 173 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms