RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 CLSTN1O94985 981 aa8.74□□□□□ -1.01
SSBP3-207ENST00000426150 SLFN14P0C7P3 912 aa8.74□□□□□ -1.01
SSBP3-207ENST00000426150 SLURP2P0DP57 97 aa8.74□□□□□ -1.01
SSBP3-207ENST00000426150 BCRP11274 1271 aa8.74□□□□□ -1.01
SSBP3-207ENST00000426150 AMPD1P23109 780 aa8.74□□□□□ -1.01
SSBP3-207ENST00000426150 GRK4P32298 578 aa8.74□□□□□ -1.01
SSBP3-207ENST00000426150 CHMP4BP1P59074 171 aa8.74□□□□□ -1.01
SSBP3-207ENST00000426150 TMEM201Q5SNT2 666 aa8.74□□□□□ -1.01
SSBP3-207ENST00000426150 C6orf15Q6UXA7 325 aaPredicted RBP8.74□□□□□ -1.01
SSBP3-207ENST00000426150 ATG4CQ96DT6 458 aa8.74□□□□□ -1.01
SSBP3-207ENST00000426150 KANSL2Q9H9L4 492 aa8.74□□□□□ -1.01
SSBP3-207ENST00000426150 CSADQ9Y600 493 aa8.74□□□□□ -1.01
SSBP3-207ENST00000426150 B2RBV5 119 aa8.73□□□□□ -1.01
SSBP3-207ENST00000426150 ACRP10323 421 aa8.73□□□□□ -1.01
SSBP3-207ENST00000426150 NME1P15531 152 aaKnown RBP8.73□□□□□ -1.01
SSBP3-207ENST00000426150 RING1Q06587 406 aa8.73□□□□□ -1.01
SSBP3-207ENST00000426150 NLRC3Q7RTR2 1065 aa8.73□□□□□ -1.01
SSBP3-207ENST00000426150 FAM178BQ8IXR5 827 aa8.73□□□□□ -1.01
SSBP3-207ENST00000426150 ANKRD13AQ8IZ07 590 aa8.73□□□□□ -1.01
SSBP3-207ENST00000426150 ADAM30Q9UKF2 790 aa8.73□□□□□ -1.01
SSBP3-207ENST00000426150 PGRP06401 933 aa8.72□□□□□ -1.01
SSBP3-207ENST00000426150 ZYXQ15942 572 aaKnown RBP8.72□□□□□ -1.01
SSBP3-207ENST00000426150 MTERF2Q49AM1 385 aa8.72□□□□□ -1.01
SSBP3-207ENST00000426150 CDCP2Q5VXM1 449 aa8.72□□□□□ -1.01
SSBP3-207ENST00000426150 INTS3Q68E01 1043 aaKnown RBP8.72□□□□□ -1.01
SSBP3-207ENST00000426150 UNC5AQ6ZN44 842 aa8.72□□□□□ -1.01
SSBP3-207ENST00000426150 DTWD1Q8N5C7 304 aa8.72□□□□□ -1.01
SSBP3-207ENST00000426150 CNNM2Q9H8M5 875 aa8.72□□□□□ -1.01
SSBP3-207ENST00000426150 KLHL3Q9UH77 587 aa8.72□□□□□ -1.01
SSBP3-207ENST00000426150 HIF3AQ9Y2N7 669 aa8.72□□□□□ -1.01
SSBP3-207ENST00000426150 SLC12A7Q9Y666 1083 aa8.72□□□□□ -1.01
SSBP3-207ENST00000426150 SYNGAP1Q96PV0 1343 aa8.72□□□□□ -1.01
SSBP3-207ENST00000426150 UPK3BL1B0FP48 263 aa8.71□□□□□ -1.02
SSBP3-207ENST00000426150 UPK3BL2E5RIL1 263 aa8.71□□□□□ -1.02
SSBP3-207ENST00000426150 TNFRSF10CO14798 259 aa8.71□□□□□ -1.02
SSBP3-207ENST00000426150 ETF1P62495 437 aaKnown RBP8.71□□□□□ -1.02
SSBP3-207ENST00000426150 ERVK-24P63145 666 aa8.71□□□□□ -1.02
SSBP3-207ENST00000426150 PLEKHG4Q58EX7 1191 aa8.71□□□□□ -1.02
SSBP3-207ENST00000426150 LCE2AQ5TA79 106 aaPredicted RBP8.71□□□□□ -1.02
SSBP3-207ENST00000426150 DCAF11Q8TEB1 546 aa8.71□□□□□ -1.02
SSBP3-207ENST00000426150 UBASH3BQ8TF42 649 aa8.71□□□□□ -1.02
SSBP3-207ENST00000426150 SLC9A7Q96T83 725 aa8.71□□□□□ -1.02
SSBP3-207ENST00000426150 WNT10AQ9GZT5 417 aa8.71□□□□□ -1.02
SSBP3-207ENST00000426150 RAD18Q9NS91 495 aa8.71□□□□□ -1.02
SSBP3-207ENST00000426150 FANCLQ9NW38 375 aa8.71□□□□□ -1.02
SSBP3-207ENST00000426150 CDC45O75419 566 aa8.7□□□□□ -1.02
SSBP3-207ENST00000426150 CELA2BP08218 269 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-207ENST00000426150 CDK11BP21127 795 aaKnown RBP8.7□□□□□ -1.02
SSBP3-207ENST00000426150 DGKGP49619 791 aa8.7□□□□□ -1.02
SSBP3-207ENST00000426150 ID3Q02535 119 aa8.7□□□□□ -1.02
SSBP3-207ENST00000426150 ARSHQ5FYA8 562 aa8.7□□□□□ -1.02
SSBP3-207ENST00000426150 PPM1JQ5JR12 505 aa8.7□□□□□ -1.02
SSBP3-207ENST00000426150 EXOSC6Q5RKV6 272 aaKnown RBP8.7□□□□□ -1.02
SSBP3-207ENST00000426150 MRM1Q6IN84 353 aaKnown RBP8.7□□□□□ -1.02
SSBP3-207ENST00000426150 ACSF2Q96CM8 615 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-207ENST00000426150 LTBP3Q9NS15 1303 aa8.7□□□□□ -1.02
SSBP3-207ENST00000426150 ESYT3A0FGR9 886 aa8.69□□□□□ -1.02
SSBP3-207ENST00000426150 CHURC1-FNTBB4DL54 471 aa8.69□□□□□ -1.02
SSBP3-207ENST00000426150 TMPRSS2O15393 492 aa8.69□□□□□ -1.02
SSBP3-207ENST00000426150 DUOXA2Q1HG44 320 aa8.69□□□□□ -1.02
SSBP3-207ENST00000426150 TRAPPC3LQ5T215 181 aa8.69□□□□□ -1.02
SSBP3-207ENST00000426150 ZBTB37Q5TC79 503 aa8.69□□□□□ -1.02
SSBP3-207ENST00000426150 LYPD4Q6UWN0 246 aa8.69□□□□□ -1.02
SSBP3-207ENST00000426150 ST13P5Q8NFI4 369 aaPredicted RBP8.69□□□□□ -1.02
SSBP3-207ENST00000426150 PHAXQ9H814 394 aaKnown RBP8.69□□□□□ -1.02
SSBP3-207ENST00000426150 PICK1Q9NRD5 415 aa8.69□□□□□ -1.02
SSBP3-207ENST00000426150 PPP1R9AQ9ULJ8 1098 aa8.69□□□□□ -1.02
SSBP3-207ENST00000426150 TOP2BQ02880 1626 aa8.69□□□□□ -1.02
SSBP3-207ENST00000426150 DLL1O00548 723 aa8.68□□□□□ -1.02
SSBP3-207ENST00000426150 FANCGO15287 622 aa8.68□□□□□ -1.02
SSBP3-207ENST00000426150 HOXB4P17483 251 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-207ENST00000426150 SQSTM1Q13501 440 aa8.68□□□□□ -1.02
SSBP3-207ENST00000426150 NCAPHQ15003 741 aa8.68□□□□□ -1.02
SSBP3-207ENST00000426150 AKAP4Q5JQC9 854 aa8.68□□□□□ -1.02
SSBP3-207ENST00000426150 VHLLQ6RSH7 139 aa8.68□□□□□ -1.02
SSBP3-207ENST00000426150 SPATC1Q76KD6 591 aa8.68□□□□□ -1.02
SSBP3-207ENST00000426150 FBXO11Q86XK2 927 aa8.68□□□□□ -1.02
SSBP3-207ENST00000426150 APPBP2Q92624 585 aa8.68□□□□□ -1.02
SSBP3-207ENST00000426150 ZNF775Q96BV0 537 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-207ENST00000426150 TMPRSS13Q9BYE2 586 aa8.68□□□□□ -1.02
SSBP3-207ENST00000426150 CRIM1Q9NZV1 1036 aa8.68□□□□□ -1.02
SSBP3-207ENST00000426150 TJP2Q9UDY2 1190 aa8.68□□□□□ -1.02
SSBP3-207ENST00000426150 PFDN2Q9UHV9 154 aa8.68□□□□□ -1.02
SSBP3-207ENST00000426150 WRNQ14191 1432 aaPredicted RBP eCLIP8.68□□□□□ -1.02
SSBP3-207ENST00000426150 FAM86C2PA6NEL3 165 aa8.67□□□□□ -1.02
SSBP3-207ENST00000426150 DIAPH1O60610 1272 aaKnown RBP8.67□□□□□ -1.02
SSBP3-207ENST00000426150 RAG1P15918 1043 aa8.67□□□□□ -1.02
SSBP3-207ENST00000426150 NTF4P34130 210 aa8.67□□□□□ -1.02
SSBP3-207ENST00000426150 C2orf27AQ580R0 203 aa8.67□□□□□ -1.02
SSBP3-207ENST00000426150 HOMER1Q86YM7 354 aa8.67□□□□□ -1.02
SSBP3-207ENST00000426150 MCATQ8IVS2 390 aaKnown RBP8.67□□□□□ -1.02
SSBP3-207ENST00000426150 JMYQ8N9B5 988 aa8.67□□□□□ -1.02
SSBP3-207ENST00000426150 THAP3Q8WTV1 239 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-207ENST00000426150 ZNF669Q96BR6 464 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-207ENST00000426150 RUSC1Q9BVN2 902 aa8.67□□□□□ -1.02
SSBP3-207ENST00000426150 TMEM260Q9NX78 707 aa8.67□□□□□ -1.02
SSBP3-207ENST00000426150 ZMYM5Q9UJ78 669 aa8.67□□□□□ -1.02
SSBP3-207ENST00000426150 COL17A1Q9UMD9 1497 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-207ENST00000426150 PCDHB10Q9UN67 800 aa8.67□□□□□ -1.02
SSBP3-207ENST00000426150 LEMD3Q9Y2U8 911 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms