RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 CDK8P49336 464 aa26.11■■□□□ 1.77
HMGA2-205ENST00000425208 ZNF287Q9HBT7 754 aa26.11■■□□□ 1.77
HMGA2-205ENST00000425208 GINM1Q9NU53 330 aa26.11■■□□□ 1.77
HMGA2-205ENST00000425208 LAMA4Q16363 1823 aa26.1■■□□□ 1.77
HMGA2-205ENST00000425208 ASNSP08243 561 aa26.1■■□□□ 1.77
HMGA2-205ENST00000425208 PPATQ06203 517 aa26.1■■□□□ 1.77
HMGA2-205ENST00000425208 MKRN3Q13064 507 aaKnown RBP26.1■■□□□ 1.77
HMGA2-205ENST00000425208 CNKSR2Q8WXI2 1034 aa26.1■■□□□ 1.77
HMGA2-205ENST00000425208 PCNTO95613 3336 aa26.09■■□□□ 1.77
HMGA2-205ENST00000425208 AOC2O75106 756 aa26.09■■□□□ 1.77
HMGA2-205ENST00000425208 PTPRAP18433 802 aa26.09■■□□□ 1.77
HMGA2-205ENST00000425208 MAP2K2P36507 400 aa26.09■■□□□ 1.77
HMGA2-205ENST00000425208 STK11IPQ8N1F8 1099 aa26.09■■□□□ 1.77
HMGA2-205ENST00000425208 ZBTB21Q9ULJ3 1066 aa26.09■■□□□ 1.77
HMGA2-205ENST00000425208 PHIPQ8WWQ0 1821 aa26.09■■□□□ 1.77
HMGA2-205ENST00000425208 GJA5P36382 358 aa26.08■■□□□ 1.77
HMGA2-205ENST00000425208 PPIL2Q13356 520 aa26.08■■□□□ 1.77
HMGA2-205ENST00000425208 ABCB5Q2M3G0 1257 aa26.08■■□□□ 1.77
HMGA2-205ENST00000425208 KIAA1211Q6ZU35 1233 aa26.08■■□□□ 1.77
HMGA2-205ENST00000425208 MKNK2Q9HBH9 465 aa26.08■■□□□ 1.77
HMGA2-205ENST00000425208 ANAPC4Q9UJX5 808 aa26.08■■□□□ 1.77
HMGA2-205ENST00000425208 GH2P01242 217 aa26.07■■□□□ 1.76
HMGA2-205ENST00000425208 PDE4BQ07343 736 aa26.07■■□□□ 1.76
HMGA2-205ENST00000425208 CABP5Q9NP86 173 aa26.07■■□□□ 1.76
HMGA2-205ENST00000425208 CTNNA3Q9UI47 895 aa26.07■■□□□ 1.76
HMGA2-205ENST00000425208 CCDC17Q96LX7 622 aa26.06■■□□□ 1.76
HMGA2-205ENST00000425208 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.06■■□□□ 1.76
HMGA2-205ENST00000425208 ZHX2Q9Y6X8 837 aa26.06■■□□□ 1.76
HMGA2-205ENST00000425208 MPHOSPH10O00566 681 aaKnown RBP26.05■■□□□ 1.76
HMGA2-205ENST00000425208 IRF6O14896 467 aa26.05■■□□□ 1.76
HMGA2-205ENST00000425208 KIF23Q02241 960 aaPredicted RBP26.05■■□□□ 1.76
HMGA2-205ENST00000425208 CTDSPL2Q05D32 466 aa26.05■■□□□ 1.76
HMGA2-205ENST00000425208 SHROOM1Q2M3G4 852 aaPredicted RBP26.05■■□□□ 1.76
HMGA2-205ENST00000425208 TBC1D2Q9BYX2 928 aa26.05■■□□□ 1.76
HMGA2-205ENST00000425208 USP17L5A8MUK1 530 aa26.05■■□□□ 1.76
HMGA2-205ENST00000425208 ZNF213O14771 459 aa26.05■■□□□ 1.76
HMGA2-205ENST00000425208 HAND2P61296 217 aa26.05■■□□□ 1.76
HMGA2-205ENST00000425208 JAG1P78504 1218 aa26.05■■□□□ 1.76
HMGA2-205ENST00000425208 PTH1RQ03431 593 aa26.05■■□□□ 1.76
HMGA2-205ENST00000425208 ZIC5Q96T25 663 aa26.05■■□□□ 1.76
HMGA2-205ENST00000425208 AS3MTQ9HBK9 375 aa26.05■■□□□ 1.76
HMGA2-205ENST00000425208 MANSC4A6NHS7 340 aaPredicted RBP26.04■■□□□ 1.76
HMGA2-205ENST00000425208 PRDM1O75626 825 aa26.04■■□□□ 1.76
HMGA2-205ENST00000425208 SREBF2Q12772 1141 aa26.04■■□□□ 1.76
HMGA2-205ENST00000425208 RAB3GAP1Q15042 981 aa26.04■■□□□ 1.76
HMGA2-205ENST00000425208 IMMTQ16891 758 aaKnown RBP26.04■■□□□ 1.76
HMGA2-205ENST00000425208 CCDC84Q86UT8 332 aaPredicted RBP26.04■■□□□ 1.76
HMGA2-205ENST00000425208 REM2Q8IYK8 340 aaPredicted RBP26.04■■□□□ 1.76
HMGA2-205ENST00000425208 ANO2Q9NQ90 1003 aa26.04■■□□□ 1.76
HMGA2-205ENST00000425208 U3KPZ7 1027 aaPredicted RBP26.04■■□□□ 1.76
HMGA2-205ENST00000425208 PTPRFP10586 1907 aa26.03■■□□□ 1.76
HMGA2-205ENST00000425208 AKR1B1P15121 316 aa26.03■■□□□ 1.76
HMGA2-205ENST00000425208 RASA1P20936 1047 aa26.03■■□□□ 1.76
HMGA2-205ENST00000425208 GTF2A2P52657 109 aa26.03■■□□□ 1.76
HMGA2-205ENST00000425208 SNAPC2Q13487 334 aa26.03■■□□□ 1.76
HMGA2-205ENST00000425208 TMEM179Q6ZVK1 233 aa26.03■■□□□ 1.76
HMGA2-205ENST00000425208 KCNH4Q9UQ05 1017 aa26.03■■□□□ 1.76
HMGA2-205ENST00000425208 AFG3L2Q9Y4W6 797 aa26.03■■□□□ 1.76
HMGA2-205ENST00000425208 ZNF444Q8N0Y2 327 aaPredicted RBP26.02■■□□□ 1.76
HMGA2-205ENST00000425208 ZNF280CQ8ND82 737 aa26.02■■□□□ 1.76
HMGA2-205ENST00000425208 MAP4K1Q92918 833 aa26.02■■□□□ 1.76
HMGA2-205ENST00000425208 LSG1Q9H089 658 aaKnown RBP26.02■■□□□ 1.76
HMGA2-205ENST00000425208 CXCL11O14625 94 aa26.01■■□□□ 1.75
HMGA2-205ENST00000425208 JMYQ8N9B5 988 aa26.01■■□□□ 1.75
HMGA2-205ENST00000425208 GREB1LQ9C091 1923 aaPredicted RBP26.01■■□□□ 1.75
HMGA2-205ENST00000425208 RNF41Q9H4P4 317 aaPredicted RBP26.01■■□□□ 1.75
HMGA2-205ENST00000425208 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.01■■□□□ 1.75
HMGA2-205ENST00000425208 TRIM75PA6NK02 468 aa26■■□□□ 1.75
HMGA2-205ENST00000425208 PCP11498 1178 aaKnown RBP26■■□□□ 1.75
HMGA2-205ENST00000425208 INHBEP58166 350 aa26■■□□□ 1.75
HMGA2-205ENST00000425208 MAP2K1Q02750 393 aaPredicted RBP26■■□□□ 1.75
HMGA2-205ENST00000425208 SEPT2Q15019 361 aa26■■□□□ 1.75
HMGA2-205ENST00000425208 AKNAD1Q5T1N1 836 aa26■■□□□ 1.75
HMGA2-205ENST00000425208 STAG1Q8WVM7 1258 aa26■■□□□ 1.75
HMGA2-205ENST00000425208 MS4A4AQ96JQ5 239 aa26■■□□□ 1.75
HMGA2-205ENST00000425208 WDR18Q9BV38 432 aa26■■□□□ 1.75
HMGA2-205ENST00000425208 NBPF3Q9H094 633 aa26■■□□□ 1.75
HMGA2-205ENST00000425208 CCL15-CCL14A0A0B4J2E2 113 aa25.99■■□□□ 1.75
HMGA2-205ENST00000425208 CETPP11597 493 aa25.99■■□□□ 1.75
HMGA2-205ENST00000425208 SPP2Q13103 211 aa25.99■■□□□ 1.75
HMGA2-205ENST00000425208 CCL15Q16663 113 aa25.99■■□□□ 1.75
HMGA2-205ENST00000425208 MFSD6Q6ZSS7 791 aa25.99■■□□□ 1.75
HMGA2-205ENST00000425208 TBC1D10CQ8IV04 446 aa25.99■■□□□ 1.75
HMGA2-205ENST00000425208 TOMM22Q9NS69 142 aa25.99■■□□□ 1.75
HMGA2-205ENST00000425208 RBM8AQ9Y5S9 174 aaKnown RBP25.99■■□□□ 1.75
HMGA2-205ENST00000425208 ORC4O43929 436 aa25.98■■□□□ 1.75
HMGA2-205ENST00000425208 FGRP09769 529 aa25.98■■□□□ 1.75
HMGA2-205ENST00000425208 GUCY1A2P33402 732 aa25.98■■□□□ 1.75
HMGA2-205ENST00000425208 TSPY3P0CV98 308 aa25.97■■□□□ 1.75
HMGA2-205ENST00000425208 TSPY8P0CW00 308 aa25.97■■□□□ 1.75
HMGA2-205ENST00000425208 TM4SF4P48230 202 aa25.97■■□□□ 1.75
HMGA2-205ENST00000425208 INCENPQ9NQS7 918 aa25.97■■□□□ 1.75
HMGA2-205ENST00000425208 PLIN4Q96Q06 1357 aa25.97■■□□□ 1.75
HMGA2-205ENST00000425208 A0A0G2JLL6 359 aaPredicted RBP25.97■■□□□ 1.75
HMGA2-205ENST00000425208 TESPA1A2RU30 521 aaPredicted RBP25.97■■□□□ 1.75
HMGA2-205ENST00000425208 ICA1Q05084 483 aa25.97■■□□□ 1.75
HMGA2-205ENST00000425208 RRP12Q5JTH9 1297 aaKnown RBP25.97■■□□□ 1.75
HMGA2-205ENST00000425208 PRRT2Q7Z6L0 340 aaPredicted RBP25.97■■□□□ 1.75
HMGA2-205ENST00000425208 BRI3BPQ8WY22 251 aa25.97■■□□□ 1.75
HMGA2-205ENST00000425208 TACC3Q9Y6A5 838 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms