RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 SMCR8Q8TEV9 937 aaPredicted RBP15.86■□□□□ 0.13
VRK3-203ENST00000424804 PRO3102Q9H379 93 aa15.86■□□□□ 0.13
VRK3-203ENST00000424804 PAK6Q9NQU5 681 aaPredicted RBP15.86■□□□□ 0.13
VRK3-203ENST00000424804 MORF4L1Q9UBU8 362 aa15.86■□□□□ 0.13
VRK3-203ENST00000424804 ALPK3Q96L96 1907 aa15.86■□□□□ 0.13
VRK3-203ENST00000424804 PLCG2P16885 1265 aa15.85■□□□□ 0.13
VRK3-203ENST00000424804 C20orf194Q5TEA3 1177 aa15.85■□□□□ 0.13
VRK3-203ENST00000424804 P2RX7Q99572 595 aaKnown RBP15.85■□□□□ 0.13
VRK3-203ENST00000424804 CRISPLD2Q9H0B8 497 aa15.85■□□□□ 0.13
VRK3-203ENST00000424804 TXNRD2Q9NNW7 524 aa15.85■□□□□ 0.13
VRK3-203ENST00000424804 BIN2Q9UBW5 565 aaPredicted RBP15.85■□□□□ 0.13
VRK3-203ENST00000424804 PNMA3Q9UL41 463 aa15.85■□□□□ 0.13
VRK3-203ENST00000424804 DDX19BQ9UMR2 479 aa15.85■□□□□ 0.13
VRK3-203ENST00000424804 GDF11O95390 407 aa15.84■□□□□ 0.13
VRK3-203ENST00000424804 CYP7A1P22680 504 aa15.84■□□□□ 0.13
VRK3-203ENST00000424804 GCLCP48506 637 aaPredicted RBP15.84■□□□□ 0.13
VRK3-203ENST00000424804 MTMR2Q13614 643 aa15.84■□□□□ 0.13
VRK3-203ENST00000424804 BCL11AQ9H165 835 aa15.84■□□□□ 0.13
VRK3-203ENST00000424804 SAP30BPQ9UHR5 308 aaKnown RBP15.84■□□□□ 0.13
VRK3-203ENST00000424804 EXOC6BQ9Y2D4 811 aa15.84■□□□□ 0.13
VRK3-203ENST00000424804 ASNSP08243 561 aa15.83■□□□□ 0.12
VRK3-203ENST00000424804 MNX1P50219 401 aaPredicted RBP15.83■□□□□ 0.12
VRK3-203ENST00000424804 TRIM32Q13049 653 aa15.83■□□□□ 0.12
VRK3-203ENST00000424804 Q3C1V9 767 aa15.83■□□□□ 0.12
VRK3-203ENST00000424804 TATDN1Q6P1N9 297 aa15.83■□□□□ 0.12
VRK3-203ENST00000424804 SIRT2Q8IXJ6 389 aa15.83■□□□□ 0.12
VRK3-203ENST00000424804 COA7Q96BR5 231 aa15.83■□□□□ 0.12
VRK3-203ENST00000424804 NOL10Q9BSC4 688 aaKnown RBP15.83■□□□□ 0.12
VRK3-203ENST00000424804 AS3MTQ9HBK9 375 aa15.83■□□□□ 0.12
VRK3-203ENST00000424804 EMILIN3Q9NT22 766 aa15.83■□□□□ 0.12
VRK3-203ENST00000424804 GINM1Q9NU53 330 aa15.83■□□□□ 0.12
VRK3-203ENST00000424804 RBPJLQ9UBG7 517 aa15.83■□□□□ 0.12
VRK3-203ENST00000424804 ZBTB21Q9ULJ3 1066 aa15.83■□□□□ 0.12
VRK3-203ENST00000424804 MIGA1Q8NAN2 632 aa15.82■□□□□ 0.12
VRK3-203ENST00000424804 RIOK1Q9BRS2 568 aaKnown RBP15.82■□□□□ 0.12
VRK3-203ENST00000424804 DDX60LQ5H9U9 1706 aaKnown RBP15.82■□□□□ 0.12
VRK3-203ENST00000424804 C19orf81C9J6K1 198 aa15.81■□□□□ 0.12
VRK3-203ENST00000424804 USP17L10C9JJH3 530 aa15.81■□□□□ 0.12
VRK3-203ENST00000424804 IDH1O75874 414 aaKnown RBP15.81■□□□□ 0.12
VRK3-203ENST00000424804 FARP2O94887 1054 aaPredicted RBP15.81■□□□□ 0.12
VRK3-203ENST00000424804 EVX2Q03828 476 aa15.81■□□□□ 0.12
VRK3-203ENST00000424804 PABPC4Q13310 644 aaKnown RBP eCLIP15.81■□□□□ 0.12
VRK3-203ENST00000424804 MAGEB6Q8N7X4 407 aa15.81■□□□□ 0.12
VRK3-203ENST00000424804 USP6NLQ92738 828 aa15.81■□□□□ 0.12
VRK3-203ENST00000424804 DPF3Q92784 378 aa15.81■□□□□ 0.12
VRK3-203ENST00000424804 DEFB118Q96PH6 123 aa15.81■□□□□ 0.12
VRK3-203ENST00000424804 APBB1O00213 710 aa15.8■□□□□ 0.12
VRK3-203ENST00000424804 GUCY1A2P33402 732 aa15.8■□□□□ 0.12
VRK3-203ENST00000424804 HERVK_113P62684 666 aa15.8■□□□□ 0.12
VRK3-203ENST00000424804 CHRDL2Q6WN34 429 aa15.8■□□□□ 0.12
VRK3-203ENST00000424804 RHPN1Q8TCX5 695 aa15.8■□□□□ 0.12
VRK3-203ENST00000424804 CHMP4BQ9H444 224 aaKnown RBP15.8■□□□□ 0.12
VRK3-203ENST00000424804 IL1RAPL2Q9NP60 686 aa15.8■□□□□ 0.12
VRK3-203ENST00000424804 RBM27Q9P2N5 1060 aaKnown RBP15.8■□□□□ 0.12
VRK3-203ENST00000424804 CNMDO75829 334 aa15.79■□□□□ 0.12
VRK3-203ENST00000424804 GH2P01242 217 aa15.79■□□□□ 0.12
VRK3-203ENST00000424804 PLCD1P51178 756 aa15.79■□□□□ 0.12
VRK3-203ENST00000424804 PDE3AQ14432 1141 aa15.79■□□□□ 0.12
VRK3-203ENST00000424804 MAP3K21Q5TCX8 1036 aa15.79■□□□□ 0.12
VRK3-203ENST00000424804 AACSQ86V21 672 aa15.79■□□□□ 0.12
VRK3-203ENST00000424804 CRACR2BQ8N4Y2 399 aaPredicted RBP15.79■□□□□ 0.12
VRK3-203ENST00000424804 DIS3LQ8TF46 1054 aaKnown RBP15.79■□□□□ 0.12
VRK3-203ENST00000424804 TRIB2Q92519 343 aa15.79■□□□□ 0.12
VRK3-203ENST00000424804 C12orf42Q96LP6 360 aa15.79■□□□□ 0.12
VRK3-203ENST00000424804 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.79■□□□□ 0.12
VRK3-203ENST00000424804 EHD4Q9H223 541 aa15.79■□□□□ 0.12
VRK3-203ENST00000424804 LAMA3Q16787 3333 aa15.78■□□□□ 0.12
VRK3-203ENST00000424804 TCRBV5S4A2TA0A5A2 114 aa15.78■□□□□ 0.12
VRK3-203ENST00000424804 TFRCP02786 760 aaKnown RBP15.78■□□□□ 0.12
VRK3-203ENST00000424804 HMGCRP04035 888 aa15.78■□□□□ 0.12
VRK3-203ENST00000424804 CAPN2P17655 700 aa15.78■□□□□ 0.12
VRK3-203ENST00000424804 SHMT1P34896 483 aa15.78■□□□□ 0.12
VRK3-203ENST00000424804 GABPAQ06546 454 aa15.78■□□□□ 0.12
VRK3-203ENST00000424804 ACER1Q8TDN7 264 aa15.78■□□□□ 0.12
VRK3-203ENST00000424804 HTATIP2Q9BUP3 242 aa15.78■□□□□ 0.12
VRK3-203ENST00000424804 PORCNQ9H237 461 aa15.78■□□□□ 0.12
VRK3-203ENST00000424804 ZBTB40Q9NUA8 1239 aa15.78■□□□□ 0.12
VRK3-203ENST00000424804 TMOD4Q9NZQ9 345 aa15.78■□□□□ 0.12
VRK3-203ENST00000424804 TAOK2Q9UL54 1235 aa15.78■□□□□ 0.12
VRK3-203ENST00000424804 RLFQ13129 1914 aa15.77■□□□□ 0.12
VRK3-203ENST00000424804 HLA-DOAP06340 250 aa15.77■□□□□ 0.12
VRK3-203ENST00000424804 IRX3P78415 501 aaPredicted RBP15.77■□□□□ 0.12
VRK3-203ENST00000424804 MORN1Q5T089 497 aa15.77■□□□□ 0.12
VRK3-203ENST00000424804 TMED8Q6PL24 325 aaPredicted RBP15.77■□□□□ 0.12
VRK3-203ENST00000424804 USP17L2Q6R6M4 530 aa15.77■□□□□ 0.12
VRK3-203ENST00000424804 ERC1Q8IUD2 1116 aa15.77■□□□□ 0.12
VRK3-203ENST00000424804 GPRC5AQ8NFJ5 357 aa15.77■□□□□ 0.12
VRK3-203ENST00000424804 PAWRQ96IZ0 340 aaKnown RBP15.77■□□□□ 0.12
VRK3-203ENST00000424804 SERPINB13Q9UIV8 391 aa15.77■□□□□ 0.12
VRK3-203ENST00000424804 RPTORQ8N122 1335 aa15.76■□□□□ 0.11
VRK3-203ENST00000424804 HMMRO75330 724 aa15.76■□□□□ 0.11
VRK3-203ENST00000424804 XRCC5P13010 732 aaKnown RBP15.76■□□□□ 0.11
VRK3-203ENST00000424804 PDE6AP16499 860 aa15.76■□□□□ 0.11
VRK3-203ENST00000424804 USP5P45974 858 aa15.76■□□□□ 0.11
VRK3-203ENST00000424804 RRP1P56182 461 aaKnown RBP15.76■□□□□ 0.11
VRK3-203ENST00000424804 ERVK-9P63128 1117 aa15.76■□□□□ 0.11
VRK3-203ENST00000424804 ERVK-24P63145 666 aa15.76■□□□□ 0.11
VRK3-203ENST00000424804 MAP3K12Q12852 859 aa15.76■□□□□ 0.11
VRK3-203ENST00000424804 SLFNL1Q499Z3 407 aa15.76■□□□□ 0.11
VRK3-203ENST00000424804 RPAP2Q8IXW5 612 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms