RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 ABCB5Q2M3G0 1257 aa23.68■■□□□ 1.38
RPUSD3-202ENST00000418713 ZNF280CQ8ND82 737 aa23.68■■□□□ 1.38
RPUSD3-202ENST00000418713 CNKSR2Q8WXI2 1034 aa23.68■■□□□ 1.38
RPUSD3-202ENST00000418713 SEC62Q99442 399 aaKnown RBP23.68■■□□□ 1.38
RPUSD3-202ENST00000418713 PRDM10Q9NQV6 1147 aa23.68■■□□□ 1.38
RPUSD3-202ENST00000418713 AFG3L2Q9Y4W6 797 aa23.68■■□□□ 1.38
RPUSD3-202ENST00000418713 NAV1Q8NEY1 1877 aa23.68■■□□□ 1.38
RPUSD3-202ENST00000418713 IFFO2Q5TF58 517 aa23.67■■□□□ 1.38
RPUSD3-202ENST00000418713 CFHR5Q9BXR6 569 aa23.67■■□□□ 1.38
RPUSD3-202ENST00000418713 DNAJC18Q9H819 358 aa23.67■■□□□ 1.38
RPUSD3-202ENST00000418713 MINDY4BA8MYZ0 360 aa23.66■■□□□ 1.38
RPUSD3-202ENST00000418713 NMIQ13287 307 aaPredicted RBP23.66■■□□□ 1.38
RPUSD3-202ENST00000418713 WDR18Q9BV38 432 aa23.66■■□□□ 1.38
RPUSD3-202ENST00000418713 DOCK1Q14185 1865 aa23.65■■□□□ 1.38
RPUSD3-202ENST00000418713 C19orf81C9J6K1 198 aa23.65■■□□□ 1.38
RPUSD3-202ENST00000418713 NOM1Q5C9Z4 860 aaKnown RBP23.65■■□□□ 1.38
RPUSD3-202ENST00000418713 C16orf86Q6ZW13 317 aa23.65■■□□□ 1.38
RPUSD3-202ENST00000418713 MKNK2Q9HBH9 465 aa23.65■■□□□ 1.38
RPUSD3-202ENST00000418713 ZFYVE28Q9HCC9 887 aa23.65■■□□□ 1.38
RPUSD3-202ENST00000418713 ZBTB21Q9ULJ3 1066 aa23.65■■□□□ 1.38
RPUSD3-202ENST00000418713 SLURP2P0DP57 97 aa23.64■■□□□ 1.37
RPUSD3-202ENST00000418713 HSPA8P11142 646 aaKnown RBP23.64■■□□□ 1.37
RPUSD3-202ENST00000418713 SHMT1P34896 483 aa23.64■■□□□ 1.37
RPUSD3-202ENST00000418713 CDK8P49336 464 aa23.64■■□□□ 1.37
RPUSD3-202ENST00000418713 PDE4BQ07343 736 aa23.64■■□□□ 1.37
RPUSD3-202ENST00000418713 SPP2Q13103 211 aa23.64■■□□□ 1.37
RPUSD3-202ENST00000418713 PABPC4Q13310 644 aaKnown RBP eCLIP23.64■■□□□ 1.37
RPUSD3-202ENST00000418713 ALX1Q15699 326 aa23.64■■□□□ 1.37
RPUSD3-202ENST00000418713 CWC27Q6UX04 472 aaKnown RBP23.64■■□□□ 1.37
RPUSD3-202ENST00000418713 ANKRD23Q86SG2 305 aa23.64■■□□□ 1.37
RPUSD3-202ENST00000418713 BRI3BPQ8WY22 251 aa23.64■■□□□ 1.37
RPUSD3-202ENST00000418713 FAM227BQ96M60 508 aa23.64■■□□□ 1.37
RPUSD3-202ENST00000418713 CCDC171Q6TFL3 1326 aa23.63■■□□□ 1.37
RPUSD3-202ENST00000418713 A0A0G2JLL6 359 aaPredicted RBP23.63■■□□□ 1.37
RPUSD3-202ENST00000418713 TRIM75PA6NK02 468 aa23.63■■□□□ 1.37
RPUSD3-202ENST00000418713 GDF11O95390 407 aa23.63■■□□□ 1.37
RPUSD3-202ENST00000418713 GH2P01242 217 aa23.63■■□□□ 1.37
RPUSD3-202ENST00000418713 LBX1P52954 281 aa23.63■■□□□ 1.37
RPUSD3-202ENST00000418713 TMEM179Q6ZVK1 233 aa23.63■■□□□ 1.37
RPUSD3-202ENST00000418713 PRRT2Q7Z6L0 340 aaPredicted RBP23.63■■□□□ 1.37
RPUSD3-202ENST00000418713 TMOD4Q9NZQ9 345 aa23.63■■□□□ 1.37
RPUSD3-202ENST00000418713 A0A0D9SFI3 127 aa23.62■■□□□ 1.37
RPUSD3-202ENST00000418713 USP17L10C9JJH3 530 aa23.62■■□□□ 1.37
RPUSD3-202ENST00000418713 IGF2BP3O00425 579 aaKnown RBP eCLIP23.62■■□□□ 1.37
RPUSD3-202ENST00000418713 MPHOSPH10O00566 681 aaKnown RBP23.62■■□□□ 1.37
RPUSD3-202ENST00000418713 CYP2D6P10635 497 aa23.62■■□□□ 1.37
RPUSD3-202ENST00000418713 USP14P54578 494 aa23.62■■□□□ 1.37
RPUSD3-202ENST00000418713 RAB3GAP1Q15042 981 aa23.62■■□□□ 1.37
RPUSD3-202ENST00000418713 ZNF444Q8N0Y2 327 aaPredicted RBP23.62■■□□□ 1.37
RPUSD3-202ENST00000418713 PROCA1Q8NCQ7 364 aaPredicted RBP23.62■■□□□ 1.37
RPUSD3-202ENST00000418713 PTPN18Q99952 460 aa23.62■■□□□ 1.37
RPUSD3-202ENST00000418713 SLC45A1Q9Y2W3 748 aa23.62■■□□□ 1.37
RPUSD3-202ENST00000418713 LAMB1P07942 1786 aa23.62■■□□□ 1.37
RPUSD3-202ENST00000418713 BAZ2AQ9UIF9 1905 aaKnown RBP23.61■■□□□ 1.37
RPUSD3-202ENST00000418713 GSPT1P15170 499 aaKnown RBP23.61■■□□□ 1.37
RPUSD3-202ENST00000418713 RRP1BQ14684 758 aaKnown RBP23.61■■□□□ 1.37
RPUSD3-202ENST00000418713 TAF1CQ15572 869 aaPredicted RBP23.61■■□□□ 1.37
RPUSD3-202ENST00000418713 CCDC129Q6ZRS4 1044 aa23.61■■□□□ 1.37
RPUSD3-202ENST00000418713 DYNLL2Q96FJ2 89 aa23.61■■□□□ 1.37
RPUSD3-202ENST00000418713 SIPA1L1O43166 1804 aa23.61■■□□□ 1.37
RPUSD3-202ENST00000418713 PCNTO95613 3336 aa23.61■■□□□ 1.37
RPUSD3-202ENST00000418713 RAD50Q92878 1312 aa23.6■■□□□ 1.37
RPUSD3-202ENST00000418713 HSPD1P10809 573 aaKnown RBP23.6■■□□□ 1.37
RPUSD3-202ENST00000418713 BACE1P56817 501 aa23.6■■□□□ 1.37
RPUSD3-202ENST00000418713 SH3D19Q5HYK7 790 aa23.6■■□□□ 1.37
RPUSD3-202ENST00000418713 GADL1Q6ZQY3 521 aa23.6■■□□□ 1.37
RPUSD3-202ENST00000418713 SH2D4AQ9H788 454 aa23.6■■□□□ 1.37
RPUSD3-202ENST00000418713 PNMA3Q9UL41 463 aa23.6■■□□□ 1.37
RPUSD3-202ENST00000418713 ZMYM6O95789 1325 aa23.59■■□□□ 1.37
RPUSD3-202ENST00000418713 DDX60LQ5H9U9 1706 aaKnown RBP23.59■■□□□ 1.37
RPUSD3-202ENST00000418713 CYP2D7A0A087X1C5 515 aa23.59■■□□□ 1.37
RPUSD3-202ENST00000418713 BTBD19C9JJ37 291 aa23.59■■□□□ 1.37
RPUSD3-202ENST00000418713 TBC1D8O95759 1140 aa23.59■■□□□ 1.37
RPUSD3-202ENST00000418713 PPARAQ07869 468 aa23.59■■□□□ 1.37
RPUSD3-202ENST00000418713 ARHGEF6Q15052 776 aa23.59■■□□□ 1.37
RPUSD3-202ENST00000418713 PPP4R3BQ5MIZ7 849 aa23.59■■□□□ 1.37
RPUSD3-202ENST00000418713 EPB41L4AQ9HCS5 686 aaPredicted RBP23.59■■□□□ 1.37
RPUSD3-202ENST00000418713 CTNNA3Q9UI47 895 aa23.59■■□□□ 1.37
RPUSD3-202ENST00000418713 ROBO3Q96MS0 1386 aa23.58■■□□□ 1.37
RPUSD3-202ENST00000418713 PDHXO00330 501 aa23.58■■□□□ 1.37
RPUSD3-202ENST00000418713 NT5C2P49902 561 aa23.58■■□□□ 1.37
RPUSD3-202ENST00000418713 BMP2KLQ5H9B9 411 aa23.58■■□□□ 1.37
RPUSD3-202ENST00000418713 USP17L2Q6R6M4 530 aa23.58■■□□□ 1.37
RPUSD3-202ENST00000418713 FAM43AQ8N2R8 423 aa23.58■■□□□ 1.37
RPUSD3-202ENST00000418713 PARK7Q99497 189 aaKnown RBP23.58■■□□□ 1.37
RPUSD3-202ENST00000418713 FEZ1Q99689 392 aa23.58■■□□□ 1.37
RPUSD3-202ENST00000418713 KANSL2Q9H9L4 492 aa23.58■■□□□ 1.37
RPUSD3-202ENST00000418713 ARHGEF10LQ9HCE6 1279 aa23.58■■□□□ 1.37
RPUSD3-202ENST00000418713 ATAD5Q96QE3 1844 aa23.57■■□□□ 1.36
RPUSD3-202ENST00000418713 GPR25O00155 361 aa23.57■■□□□ 1.36
RPUSD3-202ENST00000418713 FGAP02671 866 aa23.57■■□□□ 1.36
RPUSD3-202ENST00000418713 PCP11498 1178 aaKnown RBP23.57■■□□□ 1.36
RPUSD3-202ENST00000418713 OSBPP22059 807 aa23.57■■□□□ 1.36
RPUSD3-202ENST00000418713 CASC1Q6TDU7 716 aa23.57■■□□□ 1.36
RPUSD3-202ENST00000418713 TSKSQ9UJT2 592 aa23.57■■□□□ 1.36
RPUSD3-202ENST00000418713 ANAPC4Q9UJX5 808 aa23.57■■□□□ 1.36
RPUSD3-202ENST00000418713 AGTPBP1Q9UPW5 1226 aa23.57■■□□□ 1.36
RPUSD3-202ENST00000418713 CHMLP26374 656 aa23.56■■□□□ 1.36
RPUSD3-202ENST00000418713 CRHR2Q13324 411 aa23.56■■□□□ 1.36
RPUSD3-202ENST00000418713 SLC44A5Q8NCS7 719 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms