RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 SLFNL1Q499Z3 407 aa12.7□□□□□ -0.38
RFC1-203ENST00000418436 MAPKAPK5Q8IW41 473 aa12.7□□□□□ -0.38
RFC1-203ENST00000418436 PLEKHM2Q8IWE5 1019 aa12.7□□□□□ -0.38
RFC1-203ENST00000418436 ZSCAN29Q8IWY8 852 aaPredicted RBP12.7□□□□□ -0.38
RFC1-203ENST00000418436 SLC10A4Q96EP9 437 aa12.7□□□□□ -0.38
RFC1-203ENST00000418436 DHX36Q9H2U1 1008 aaKnown RBP12.7□□□□□ -0.38
RFC1-203ENST00000418436 WBP1LQ9NX94 342 aa12.7□□□□□ -0.38
RFC1-203ENST00000418436 NAV1Q8NEY1 1877 aa12.7□□□□□ -0.38
RFC1-203ENST00000418436 PHF20L1A8MW92 1017 aa12.69□□□□□ -0.38
RFC1-203ENST00000418436 KIF23Q02241 960 aaPredicted RBP12.69□□□□□ -0.38
RFC1-203ENST00000418436 VGLL4Q14135 290 aa12.69□□□□□ -0.38
RFC1-203ENST00000418436 MFSD10Q14728 455 aa12.69□□□□□ -0.38
RFC1-203ENST00000418436 SPRYD7Q5W111 196 aa12.69□□□□□ -0.38
RFC1-203ENST00000418436 METTL16Q86W50 562 aaKnown RBP12.69□□□□□ -0.38
RFC1-203ENST00000418436 LCORLQ8N3X6 602 aa12.69□□□□□ -0.38
RFC1-203ENST00000418436 WNK4Q96J92 1243 aa12.69□□□□□ -0.38
RFC1-203ENST00000418436 WRNIP1Q96S55 665 aa12.69□□□□□ -0.38
RFC1-203ENST00000418436 LARP6Q9BRS8 491 aaKnown RBP12.69□□□□□ -0.38
RFC1-203ENST00000418436 RNF113AO15541 343 aaKnown RBP12.68□□□□□ -0.38
RFC1-203ENST00000418436 ZFYP08048 801 aaPredicted RBP12.68□□□□□ -0.38
RFC1-203ENST00000418436 SLURP2P0DP57 97 aa12.68□□□□□ -0.38
RFC1-203ENST00000418436 ZBTB48P10074 688 aaPredicted RBP12.68□□□□□ -0.38
RFC1-203ENST00000418436 INPP5BP32019 993 aa12.68□□□□□ -0.38
RFC1-203ENST00000418436 NOL9Q5SY16 702 aaKnown RBP12.68□□□□□ -0.38
RFC1-203ENST00000418436 ZKSCAN4Q969J2 545 aaPredicted RBP12.68□□□□□ -0.38
RFC1-203ENST00000418436 DDX27Q96GQ7 796 aaKnown RBP12.68□□□□□ -0.38
RFC1-203ENST00000418436 CRNKL1Q9BZJ0 848 aaKnown RBP12.68□□□□□ -0.38
RFC1-203ENST00000418436 PUS7LQ9H0K6 701 aaKnown RBP12.68□□□□□ -0.38
RFC1-203ENST00000418436 PI4KBQ9UBF8 816 aa12.68□□□□□ -0.38
RFC1-203ENST00000418436 LHX6Q9UPM6 363 aa12.68□□□□□ -0.38
RFC1-203ENST00000418436 CSADQ9Y600 493 aa12.68□□□□□ -0.38
RFC1-203ENST00000418436 SNCAIPQ9Y6H5 919 aa12.68□□□□□ -0.38
RFC1-203ENST00000418436 DOCK1Q14185 1865 aa12.68□□□□□ -0.38
RFC1-203ENST00000418436 ATAD5Q96QE3 1844 aa12.67□□□□□ -0.38
RFC1-203ENST00000418436 MBD4O95243 580 aa12.67□□□□□ -0.38
RFC1-203ENST00000418436 HSPA1AP0DMV8 641 aaKnown RBP12.67□□□□□ -0.38
RFC1-203ENST00000418436 HSPA1BP0DMV9 641 aaKnown RBP12.67□□□□□ -0.38
RFC1-203ENST00000418436 GJA5P36382 358 aa12.67□□□□□ -0.38
RFC1-203ENST00000418436 USP5P45974 858 aa12.67□□□□□ -0.38
RFC1-203ENST00000418436 LRRFIP1Q32MZ4 808 aaKnown RBP12.67□□□□□ -0.38
RFC1-203ENST00000418436 TICAM2Q86XR7 235 aa12.67□□□□□ -0.38
RFC1-203ENST00000418436 FOXP4Q8IVH2 680 aaPredicted RBP12.67□□□□□ -0.38
RFC1-203ENST00000418436 SPNS2Q8IVW8 549 aa12.67□□□□□ -0.38
RFC1-203ENST00000418436 SPRYD3Q8NCJ5 442 aa12.67□□□□□ -0.38
RFC1-203ENST00000418436 OXER1Q8TDS5 423 aa12.67□□□□□ -0.38
RFC1-203ENST00000418436 APPBP2Q92624 585 aa12.67□□□□□ -0.38
RFC1-203ENST00000418436 EVI5LQ96CN4 794 aa12.67□□□□□ -0.38
RFC1-203ENST00000418436 ARMT1Q9H993 441 aa12.67□□□□□ -0.38
RFC1-203ENST00000418436 ELP3Q9H9T3 547 aa12.67□□□□□ -0.38
RFC1-203ENST00000418436 HERC5Q9UII4 1024 aaKnown RBP12.67□□□□□ -0.38
RFC1-203ENST00000418436 PALD1Q9ULE6 856 aa12.67□□□□□ -0.38
RFC1-203ENST00000418436 PHIPQ8WWQ0 1821 aa12.67□□□□□ -0.38
RFC1-203ENST00000418436 BAZ2AQ9UIF9 1905 aaKnown RBP12.66□□□□□ -0.38
RFC1-203ENST00000418436 SPDYE5A6NIY4 337 aa12.66□□□□□ -0.38
RFC1-203ENST00000418436 CENPBP07199 599 aaPredicted RBP12.66□□□□□ -0.38
RFC1-203ENST00000418436 TM4SF4P48230 202 aa12.66□□□□□ -0.38
RFC1-203ENST00000418436 ERO1BQ86YB8 467 aa12.66□□□□□ -0.38
RFC1-203ENST00000418436 OSBP2Q969R2 916 aa12.66□□□□□ -0.38
RFC1-203ENST00000418436 OPTNQ96CV9 577 aa12.66□□□□□ -0.38
RFC1-203ENST00000418436 FSD1Q9BTV5 496 aa12.66□□□□□ -0.38
RFC1-203ENST00000418436 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.66□□□□□ -0.38
RFC1-203ENST00000418436 DCP1AQ9NPI6 582 aaPredicted RBP12.66□□□□□ -0.38
RFC1-203ENST00000418436 SAP30BPQ9UHR5 308 aaKnown RBP12.66□□□□□ -0.38
RFC1-203ENST00000418436 MANSC4A6NHS7 340 aaPredicted RBP12.65□□□□□ -0.38
RFC1-203ENST00000418436 PRKAB2O43741 272 aa12.65□□□□□ -0.38
RFC1-203ENST00000418436 CTNND1O60716 968 aaKnown RBP12.65□□□□□ -0.38
RFC1-203ENST00000418436 INHBEP58166 350 aa12.65□□□□□ -0.38
RFC1-203ENST00000418436 ZMYM1Q5SVZ6 1142 aa12.65□□□□□ -0.38
RFC1-203ENST00000418436 SDR42E1Q8WUS8 393 aa12.65□□□□□ -0.38
RFC1-203ENST00000418436 AIDAQ96BJ3 306 aa12.65□□□□□ -0.38
RFC1-203ENST00000418436 STRBPQ96SI9 672 aaKnown RBP12.65□□□□□ -0.38
RFC1-203ENST00000418436 EHD4Q9H223 541 aa12.65□□□□□ -0.38
RFC1-203ENST00000418436 DNAJC18Q9H819 358 aa12.65□□□□□ -0.38
RFC1-203ENST00000418436 ATP8A2Q9NTI2 1148 aa12.65□□□□□ -0.38
RFC1-203ENST00000418436 TESPA1A2RU30 521 aaPredicted RBP12.64□□□□□ -0.39
RFC1-203ENST00000418436 FAM196BA6NMK8 535 aa12.64□□□□□ -0.39
RFC1-203ENST00000418436 FOXN1O15353 648 aa12.64□□□□□ -0.39
RFC1-203ENST00000418436 CA12O43570 354 aa12.64□□□□□ -0.39
RFC1-203ENST00000418436 HLA-DOAP06340 250 aa12.64□□□□□ -0.39
RFC1-203ENST00000418436 PPATQ06203 517 aa12.64□□□□□ -0.39
RFC1-203ENST00000418436 PPIL2Q13356 520 aa12.64□□□□□ -0.39
RFC1-203ENST00000418436 RRP1BQ14684 758 aaKnown RBP12.64□□□□□ -0.39
RFC1-203ENST00000418436 TTC6Q86TZ1 520 aa12.64□□□□□ -0.39
RFC1-203ENST00000418436 SCYL3Q8IZE3 742 aa12.64□□□□□ -0.39
RFC1-203ENST00000418436 PTPRFP10586 1907 aa12.63□□□□□ -0.39
RFC1-203ENST00000418436 M0R2C6 588 aa12.63□□□□□ -0.39
RFC1-203ENST00000418436 GPAA1O43292 621 aa12.63□□□□□ -0.39
RFC1-203ENST00000418436 CAP2P40123 477 aa12.63□□□□□ -0.39
RFC1-203ENST00000418436 PLCD1P51178 756 aa12.63□□□□□ -0.39
RFC1-203ENST00000418436 GABPAQ06546 454 aa12.63□□□□□ -0.39
RFC1-203ENST00000418436 SREBF2Q12772 1141 aa12.63□□□□□ -0.39
RFC1-203ENST00000418436 TATDN1Q6P1N9 297 aa12.63□□□□□ -0.39
RFC1-203ENST00000418436 CENPQQ7L2Z9 268 aaPredicted RBP12.63□□□□□ -0.39
RFC1-203ENST00000418436 SEC62Q99442 399 aaKnown RBP12.63□□□□□ -0.39
RFC1-203ENST00000418436 BEGAINQ9BUH8 593 aa12.63□□□□□ -0.39
RFC1-203ENST00000418436 RNF186Q9NXI6 227 aa12.63□□□□□ -0.39
RFC1-203ENST00000418436 MCM9Q9NXL9 1143 aa12.63□□□□□ -0.39
RFC1-203ENST00000418436 SAGE1Q9NXZ1 904 aa12.63□□□□□ -0.39
RFC1-203ENST00000418436 SLC4A4Q9Y6R1 1079 aa12.63□□□□□ -0.39
RFC1-203ENST00000418436 GSG1L2A8MUP6 293 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms