RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 LAMA4Q16363 1823 aa14.94□□□□□ -0.02
SKA1-203ENST00000417656 CTNND1O60716 968 aaKnown RBP14.93□□□□□ -0.02
SKA1-203ENST00000417656 HSPA1AP0DMV8 641 aaKnown RBP14.93□□□□□ -0.02
SKA1-203ENST00000417656 HSPA1BP0DMV9 641 aaKnown RBP14.93□□□□□ -0.02
SKA1-203ENST00000417656 SHMT1P34896 483 aa14.93□□□□□ -0.02
SKA1-203ENST00000417656 CAP2P40123 477 aa14.93□□□□□ -0.02
SKA1-203ENST00000417656 GABPAQ06546 454 aa14.93□□□□□ -0.02
SKA1-203ENST00000417656 PPIL2Q13356 520 aa14.93□□□□□ -0.02
SKA1-203ENST00000417656 GIMAP6Q6P9H5 292 aa14.93□□□□□ -0.02
SKA1-203ENST00000417656 ROBO3Q96MS0 1386 aa14.93□□□□□ -0.02
SKA1-203ENST00000417656 PATL2C9JE40 543 aaKnown RBP14.92□□□□□ -0.02
SKA1-203ENST00000417656 PTPRAP18433 802 aa14.92□□□□□ -0.02
SKA1-203ENST00000417656 JAG1P78504 1218 aa14.92□□□□□ -0.02
SKA1-203ENST00000417656 PPATQ06203 517 aa14.92□□□□□ -0.02
SKA1-203ENST00000417656 IFNL3Q8IZI9 196 aa14.92□□□□□ -0.02
SKA1-203ENST00000417656 NACAP1Q9BZK3 213 aa14.92□□□□□ -0.02
SKA1-203ENST00000417656 NAPBQ9H115 298 aa14.92□□□□□ -0.02
SKA1-203ENST00000417656 IL25Q9H293 177 aa14.92□□□□□ -0.02
SKA1-203ENST00000417656 ZBTB21Q9ULJ3 1066 aa14.92□□□□□ -0.02
SKA1-203ENST00000417656 LOC285556D6RIA3 1793 aa14.91□□□□□ -0.02
SKA1-203ENST00000417656 MANSC4A6NHS7 340 aaPredicted RBP14.91□□□□□ -0.02
SKA1-203ENST00000417656 MINDY4BA8MYZ0 360 aa14.91□□□□□ -0.02
SKA1-203ENST00000417656 IRF6O14896 467 aa14.91□□□□□ -0.02
SKA1-203ENST00000417656 MAP2K1Q02750 393 aaPredicted RBP14.91□□□□□ -0.02
SKA1-203ENST00000417656 SREBF2Q12772 1141 aa14.91□□□□□ -0.02
SKA1-203ENST00000417656 SBK1Q52WX2 424 aa14.91□□□□□ -0.02
SKA1-203ENST00000417656 BMP2KLQ5H9B9 411 aa14.91□□□□□ -0.02
SKA1-203ENST00000417656 TATDN1Q6P1N9 297 aa14.91□□□□□ -0.02
SKA1-203ENST00000417656 SP7Q8TDD2 431 aaPredicted RBP14.91□□□□□ -0.02
SKA1-203ENST00000417656 WBP1LQ9NX94 342 aa14.91□□□□□ -0.02
SKA1-203ENST00000417656 RAD50Q92878 1312 aa14.91□□□□□ -0.02
SKA1-203ENST00000417656 CCL15-CCL14A0A0B4J2E2 113 aa14.9□□□□□ -0.02
SKA1-203ENST00000417656 PITPNM1O00562 1244 aa14.9□□□□□ -0.02
SKA1-203ENST00000417656 GH2P01242 217 aa14.9□□□□□ -0.02
SKA1-203ENST00000417656 CHMLP26374 656 aa14.9□□□□□ -0.02
SKA1-203ENST00000417656 GTF2A2P52657 109 aa14.9□□□□□ -0.02
SKA1-203ENST00000417656 CCL15Q16663 113 aa14.9□□□□□ -0.02
SKA1-203ENST00000417656 C16orf86Q6ZW13 317 aa14.9□□□□□ -0.02
SKA1-203ENST00000417656 STK11IPQ8N1F8 1099 aa14.9□□□□□ -0.02
SKA1-203ENST00000417656 BRI3BPQ8WY22 251 aa14.9□□□□□ -0.02
SKA1-203ENST00000417656 MS4A4AQ96JQ5 239 aa14.9□□□□□ -0.02
SKA1-203ENST00000417656 SWAP70Q9UH65 585 aa14.9□□□□□ -0.02
SKA1-203ENST00000417656 ZHX2Q9Y6X8 837 aa14.9□□□□□ -0.02
SKA1-203ENST00000417656 GREB1LQ9C091 1923 aaPredicted RBP14.9□□□□□ -0.02
SKA1-203ENST00000417656 IGF2BP3O00425 579 aaKnown RBP eCLIP14.89□□□□□ -0.03
SKA1-203ENST00000417656 ASNSP08243 561 aa14.89□□□□□ -0.03
SKA1-203ENST00000417656 HSPD1P10809 573 aaKnown RBP14.89□□□□□ -0.03
SKA1-203ENST00000417656 CDK8P49336 464 aa14.89□□□□□ -0.03
SKA1-203ENST00000417656 MFAP1P55081 439 aaKnown RBP14.89□□□□□ -0.03
SKA1-203ENST00000417656 PPARAQ07869 468 aa14.89□□□□□ -0.03
SKA1-203ENST00000417656 SNAPC2Q13487 334 aa14.89□□□□□ -0.03
SKA1-203ENST00000417656 ABCB5Q2M3G0 1257 aa14.89□□□□□ -0.03
SKA1-203ENST00000417656 CERKLQ49MI3 558 aaPredicted RBP14.89□□□□□ -0.03
SKA1-203ENST00000417656 KCNH4Q9UQ05 1017 aa14.89□□□□□ -0.03
SKA1-203ENST00000417656 PCNTO95613 3336 aa14.88□□□□□ -0.03
SKA1-203ENST00000417656 TRIM75PA6NK02 468 aa14.88□□□□□ -0.03
SKA1-203ENST00000417656 USP17L5A8MUK1 530 aa14.88□□□□□ -0.03
SKA1-203ENST00000417656 FOXN1O15353 648 aa14.88□□□□□ -0.03
SKA1-203ENST00000417656 AKR1B1P15121 316 aa14.88□□□□□ -0.03
SKA1-203ENST00000417656 TM4SF4P48230 202 aa14.88□□□□□ -0.03
SKA1-203ENST00000417656 BEGAINQ9BUH8 593 aa14.88□□□□□ -0.03
SKA1-203ENST00000417656 TSKSQ9UJT2 592 aa14.88□□□□□ -0.03
SKA1-203ENST00000417656 TAOK2Q9UL54 1235 aa14.88□□□□□ -0.03
SKA1-203ENST00000417656 AFG3L2Q9Y4W6 797 aa14.88□□□□□ -0.03
SKA1-203ENST00000417656 ZMYM6O95789 1325 aa14.88□□□□□ -0.03
SKA1-203ENST00000417656 TESPA1A2RU30 521 aaPredicted RBP14.87□□□□□ -0.03
SKA1-203ENST00000417656 MPHOSPH10O00566 681 aaKnown RBP14.87□□□□□ -0.03
SKA1-203ENST00000417656 CETPP11597 493 aa14.87□□□□□ -0.03
SKA1-203ENST00000417656 ALX1Q15699 326 aa14.87□□□□□ -0.03
SKA1-203ENST00000417656 IFNL1Q8IU54 200 aa14.87□□□□□ -0.03
SKA1-203ENST00000417656 RUFY2Q8WXA3 655 aa14.87□□□□□ -0.03
SKA1-203ENST00000417656 PTPN18Q99952 460 aa14.87□□□□□ -0.03
SKA1-203ENST00000417656 AS3MTQ9HBK9 375 aa14.87□□□□□ -0.03
SKA1-203ENST00000417656 GINM1Q9NU53 330 aa14.87□□□□□ -0.03
SKA1-203ENST00000417656 RNF186Q9NXI6 227 aa14.87□□□□□ -0.03
SKA1-203ENST00000417656 A0A0G2JLL6 359 aaPredicted RBP14.86□□□□□ -0.03
SKA1-203ENST00000417656 PRDM1O75626 825 aa14.86□□□□□ -0.03
SKA1-203ENST00000417656 FGAP02671 866 aa14.86□□□□□ -0.03
SKA1-203ENST00000417656 RASA1P20936 1047 aa14.86□□□□□ -0.03
SKA1-203ENST00000417656 GUCY1A2P33402 732 aa14.86□□□□□ -0.03
SKA1-203ENST00000417656 CTDSPL2Q05D32 466 aa14.86□□□□□ -0.03
SKA1-203ENST00000417656 SPP2Q13103 211 aa14.86□□□□□ -0.03
SKA1-203ENST00000417656 MOGSQ13724 837 aa14.86□□□□□ -0.03
SKA1-203ENST00000417656 RAB3GAP1Q15042 981 aa14.86□□□□□ -0.03
SKA1-203ENST00000417656 PRRT2Q7Z6L0 340 aaPredicted RBP14.86□□□□□ -0.03
SKA1-203ENST00000417656 CLEC10AQ8IUN9 316 aa14.86□□□□□ -0.03
SKA1-203ENST00000417656 FAM43AQ8N2R8 423 aa14.86□□□□□ -0.03
SKA1-203ENST00000417656 ZNF280CQ8ND82 737 aa14.86□□□□□ -0.03
SKA1-203ENST00000417656 TBC1D2Q9BYX2 928 aa14.86□□□□□ -0.03
SKA1-203ENST00000417656 CABP5Q9NP86 173 aa14.86□□□□□ -0.03
SKA1-203ENST00000417656 BTBD19C9JJ37 291 aa14.85□□□□□ -0.03
SKA1-203ENST00000417656 CXCL11O14625 94 aa14.85□□□□□ -0.03
SKA1-203ENST00000417656 SGSM2O43147 1006 aa14.85□□□□□ -0.03
SKA1-203ENST00000417656 CA12O43570 354 aa14.85□□□□□ -0.03
SKA1-203ENST00000417656 TRPA1O75762 1119 aa14.85□□□□□ -0.03
SKA1-203ENST00000417656 HSPA8P11142 646 aaKnown RBP14.85□□□□□ -0.03
SKA1-203ENST00000417656 FXR2P51116 673 aaKnown RBP eCLIP14.85□□□□□ -0.03
SKA1-203ENST00000417656 INHBEP58166 350 aa14.85□□□□□ -0.03
SKA1-203ENST00000417656 HAND2P61296 217 aa14.85□□□□□ -0.03
SKA1-203ENST00000417656 DGKZQ13574 1117 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms