RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 SLC51AQ86UW1 340 aa7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 GLYCTKQ8IVS8 523 aa7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 RPGRQ92834 1020 aaKnown RBP7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 KLF16Q9BXK1 252 aaPredicted RBP7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 TMX4Q9H1E5 349 aaPredicted RBP7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 ARHGEF10LQ9HCE6 1279 aa7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 USP3Q9Y6I4 520 aa7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 ASTN2O75129 1339 aaPredicted RBP7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 KIF7Q2M1P5 1343 aa7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 FAM205AQ6ZU69 1335 aa7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 STARD3NLO95772 234 aa7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 ADH1AP07327 375 aa7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 CCL5P13501 91 aa7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 ERCC3P19447 782 aa7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 NF2P35240 595 aa7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 ARHGAP4P98171 946 aa7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 KIAA2012Q0VF49 1180 aa7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 FOXC1Q12948 553 aa7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 CBLBQ13191 982 aa7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 PLEKHO1Q53GL0 409 aaPredicted RBP7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 SLC9A9Q8IVB4 645 aa7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 HELQQ8TDG4 1101 aa7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 U2AF1L4Q8WU68 220 aaKnown RBP7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 ATXN2LQ8WWM7 1075 aaKnown RBP7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 RTFDC1Q9BY42 306 aaPredicted RBP7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 SAP130Q9H0E3 1048 aa7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 RNF208Q9H0X6 261 aa7.23□□□□□ -1.25
ECHDC1-206ENST00000417628 RBM47A0AV96 593 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 UNCXA6NJT0 531 aa7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 YDJCA8MPS7 323 aa7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 PSMD14O00487 310 aa7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 TCERG1O14776 1098 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 PPP1R12BO60237 982 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 ZBTB48P10074 688 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 SYN1P17600 705 aa7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 PRMT2P55345 433 aa7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 PTPN12Q05209 780 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 STAG2Q8N3U4 1231 aa7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 USP38Q8NB14 1042 aa7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 ASB2Q96Q27 587 aa7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 C2orf49Q9BVC5 232 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 SEMA6BQ9H3T3 888 aa7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 IQSEC3Q9UPP2 1182 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 ZNF652Q9Y2D9 606 aa7.22□□□□□ -1.25
ECHDC1-206ENST00000417628 CDK2AP1O14519 115 aa7.21□□□□□ -1.26
ECHDC1-206ENST00000417628 NPR3P17342 541 aa7.21□□□□□ -1.26
ECHDC1-206ENST00000417628 HOXA10P31260 410 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-206ENST00000417628 DEKP35659 375 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-206ENST00000417628 IL6STP40189 918 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-206ENST00000417628 SLC39A6Q13433 755 aa7.21□□□□□ -1.26
ECHDC1-206ENST00000417628 AMOTQ4VCS5 1084 aa7.21□□□□□ -1.26
ECHDC1-206ENST00000417628 Q6ZVU0 165 aa7.21□□□□□ -1.26
ECHDC1-206ENST00000417628 ARMC9Q7Z3E5 817 aa7.21□□□□□ -1.26
ECHDC1-206ENST00000417628 NPAS4Q8IUM7 802 aa7.21□□□□□ -1.26
ECHDC1-206ENST00000417628 SNIP1Q8TAD8 396 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-206ENST00000417628 ITPKCQ96DU7 683 aa7.21□□□□□ -1.26
ECHDC1-206ENST00000417628 ESYT1Q9BSJ8 1104 aa7.21□□□□□ -1.26
ECHDC1-206ENST00000417628 GGNBP2Q9H3C7 697 aa7.21□□□□□ -1.26
ECHDC1-206ENST00000417628 ABCC12Q96J65 1359 aa7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 LAMB1P07942 1786 aa7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 ANKRD33BA6NCL7 494 aa7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 J3QL48 77 aa7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 CAPN2P17655 700 aa7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 GTF2E1P29083 439 aaPredicted RBP7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 AAMPQ13685 434 aa7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 KIF22Q14807 665 aa7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 CLEC4GQ6UXB4 293 aa7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 DPP8Q6V1X1 898 aaPredicted RBP7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 ZNF295-AS1Q8N0V1 137 aa7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 RBM17Q96I25 401 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 AGBL1Q96MI9 1066 aa7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 ZFAND3Q9H8U3 227 aa7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 SLC52A2Q9HAB3 445 aa7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 THEGQ9P2T0 379 aa7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 WASF2Q9Y6W5 498 aa7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 PRUNE2Q8WUY3 3088 aa7.2□□□□□ -1.26
ECHDC1-206ENST00000417628 EYSQ5T1H1 3165 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 POLR2AP24928 1970 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 FAM177BA6PVY3 158 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 E9PSI1 815 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 PPM1GO15355 546 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 GDF9O60383 454 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 SGPL1O95470 568 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 GRK4P32298 578 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 PTGIRP43119 386 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 UBXN2AP68543 259 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 MRPS5P82675 430 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 NHLH1Q02575 133 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 CENPCQ03188 943 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 CLN3Q13286 438 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 SCARF1Q14162 830 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 TLR1Q15399 786 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 COX20Q5RI15 118 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 C16orf46Q6P387 395 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 VTI1AQ96AJ9 217 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 ZNF496Q96IT1 587 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 WNK4Q96J92 1243 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 CRAMP1Q96RY5 1269 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 PRKD2Q9BZL6 878 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 ARHGAP39Q9C0H5 1083 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms