RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 GPR153Q6NV75 609 aa12.32□□□□□ -0.44
MDC1-202ENST00000416571 TRMT44Q8IYL2 757 aaKnown RBP12.32□□□□□ -0.44
MDC1-202ENST00000416571 TDHQ8IZJ6 230 aa12.32□□□□□ -0.44
MDC1-202ENST00000416571 DEFB123Q8N688 67 aa12.32□□□□□ -0.44
MDC1-202ENST00000416571 SH3RF3Q8TEJ3 882 aaPredicted RBP12.32□□□□□ -0.44
MDC1-202ENST00000416571 P2RX7Q99572 595 aaKnown RBP12.32□□□□□ -0.44
MDC1-202ENST00000416571 WDR18Q9BV38 432 aa12.32□□□□□ -0.44
MDC1-202ENST00000416571 UBE2OQ9C0C9 1292 aaKnown RBP12.32□□□□□ -0.44
MDC1-202ENST00000416571 OGDHLQ9ULD0 1010 aa12.32□□□□□ -0.44
MDC1-202ENST00000416571 SIPA1L1O43166 1804 aa12.32□□□□□ -0.44
MDC1-202ENST00000416571 USP17L10C9JJH3 530 aa12.31□□□□□ -0.44
MDC1-202ENST00000416571 GNAI2P04899 355 aa12.31□□□□□ -0.44
MDC1-202ENST00000416571 HLA-DOAP06340 250 aa12.31□□□□□ -0.44
MDC1-202ENST00000416571 XRCC5P13010 732 aaKnown RBP12.31□□□□□ -0.44
MDC1-202ENST00000416571 MAPK4P31152 587 aa12.31□□□□□ -0.44
MDC1-202ENST00000416571 HOXA7P31268 230 aaPredicted RBP12.31□□□□□ -0.44
MDC1-202ENST00000416571 MAGEA10P43363 369 aaPredicted RBP12.31□□□□□ -0.44
MDC1-202ENST00000416571 TTC39AQ5SRH9 613 aa12.31□□□□□ -0.44
MDC1-202ENST00000416571 MAPKAPK5Q8IW41 473 aa12.31□□□□□ -0.44
MDC1-202ENST00000416571 TRMT2AQ8IZ69 625 aaKnown RBP12.31□□□□□ -0.44
MDC1-202ENST00000416571 GTF3C2Q8WUA4 911 aaPredicted RBP12.31□□□□□ -0.44
MDC1-202ENST00000416571 TGFBRAP1Q8WUH2 860 aa12.31□□□□□ -0.44
MDC1-202ENST00000416571 ARHGAP45Q92619 1136 aa12.31□□□□□ -0.44
MDC1-202ENST00000416571 PAGR1Q9BTK6 254 aa12.31□□□□□ -0.44
MDC1-202ENST00000416571 GINM1Q9NU53 330 aa12.31□□□□□ -0.44
MDC1-202ENST00000416571 CDK5RAP2Q96SN8 1893 aa12.31□□□□□ -0.44
MDC1-202ENST00000416571 FOCADQ5VW36 1801 aa12.3□□□□□ -0.44
MDC1-202ENST00000416571 GDF11O95390 407 aa12.3□□□□□ -0.44
MDC1-202ENST00000416571 RGS2P41220 211 aa12.3□□□□□ -0.44
MDC1-202ENST00000416571 OS9Q13438 667 aaPredicted RBP12.3□□□□□ -0.44
MDC1-202ENST00000416571 LRIT3Q3SXY7 679 aa12.3□□□□□ -0.44
MDC1-202ENST00000416571 CCDC158Q5M9N0 1113 aa12.3□□□□□ -0.44
MDC1-202ENST00000416571 MAP3K21Q5TCX8 1036 aa12.3□□□□□ -0.44
MDC1-202ENST00000416571 ATF7IPQ6VMQ6 1270 aa12.3□□□□□ -0.44
MDC1-202ENST00000416571 FOXP4Q8IVH2 680 aaPredicted RBP12.3□□□□□ -0.44
MDC1-202ENST00000416571 SNRKQ9NRH2 765 aa12.3□□□□□ -0.44
MDC1-202ENST00000416571 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.3□□□□□ -0.44
MDC1-202ENST00000416571 FLT1P17948 1338 aa12.3□□□□□ -0.44
MDC1-202ENST00000416571 IPO8O15397 1037 aaKnown RBP12.29□□□□□ -0.44
MDC1-202ENST00000416571 COL9A1P20849 921 aa12.29□□□□□ -0.44
MDC1-202ENST00000416571 RARSP54136 660 aaKnown RBP12.29□□□□□ -0.44
MDC1-202ENST00000416571 ERVK-9P63128 1117 aa12.29□□□□□ -0.44
MDC1-202ENST00000416571 ERVK-24P63145 666 aa12.29□□□□□ -0.44
MDC1-202ENST00000416571 CACNB2Q08289 660 aaPredicted RBP12.29□□□□□ -0.44
MDC1-202ENST00000416571 Q7L0L9 218 aa12.29□□□□□ -0.44
MDC1-202ENST00000416571 GPR142Q7Z601 462 aa12.29□□□□□ -0.44
MDC1-202ENST00000416571 APBA2Q99767 749 aa12.29□□□□□ -0.44
MDC1-202ENST00000416571 TXNRD2Q9NNW7 524 aa12.29□□□□□ -0.44
MDC1-202ENST00000416571 PALD1Q9ULE6 856 aa12.29□□□□□ -0.44
MDC1-202ENST00000416571 ZBTB21Q9ULJ3 1066 aa12.29□□□□□ -0.44
MDC1-202ENST00000416571 PEX10O60683 326 aa12.28□□□□□ -0.44
MDC1-202ENST00000416571 GLRX3O76003 335 aaKnown RBP12.28□□□□□ -0.44
MDC1-202ENST00000416571 PPP4CP60510 307 aa12.28□□□□□ -0.44
MDC1-202ENST00000416571 CCNA1P78396 465 aa12.28□□□□□ -0.44
MDC1-202ENST00000416571 WDR78Q5VTH9 848 aa12.28□□□□□ -0.44
MDC1-202ENST00000416571 USP17L2Q6R6M4 530 aa12.28□□□□□ -0.44
MDC1-202ENST00000416571 PLEKHH3Q7Z736 793 aa12.28□□□□□ -0.44
MDC1-202ENST00000416571 FEZ1Q99689 392 aa12.28□□□□□ -0.44
MDC1-202ENST00000416571 RBPJLQ9UBG7 517 aa12.28□□□□□ -0.44
MDC1-202ENST00000416571 SAP30BPQ9UHR5 308 aaKnown RBP12.28□□□□□ -0.44
MDC1-202ENST00000416571 STXBP5LQ9Y2K9 1186 aa12.28□□□□□ -0.44
MDC1-202ENST00000416571 PFASO15067 1338 aa12.28□□□□□ -0.44
MDC1-202ENST00000416571 MYH1P12882 1939 aa12.27□□□□□ -0.44
MDC1-202ENST00000416571 PNMA6EA0A0J9YXQ4 647 aa12.27□□□□□ -0.45
MDC1-202ENST00000416571 IGSF3O75054 1194 aa12.27□□□□□ -0.45
MDC1-202ENST00000416571 CCND3P30281 292 aaPredicted RBP12.27□□□□□ -0.45
MDC1-202ENST00000416571 Q3C1V9 767 aa12.27□□□□□ -0.45
MDC1-202ENST00000416571 FRAT1Q92837 279 aaPredicted RBP12.27□□□□□ -0.45
MDC1-202ENST00000416571 PORCNQ9H237 461 aa12.27□□□□□ -0.45
MDC1-202ENST00000416571 DNAJC18Q9H819 358 aa12.27□□□□□ -0.45
MDC1-202ENST00000416571 FRMPD3Q5JV73 1810 aa12.27□□□□□ -0.45
MDC1-202ENST00000416571 MYO5AQ9Y4I1 1855 aaKnown RBP12.27□□□□□ -0.45
MDC1-202ENST00000416571 COL6A1P12109 1028 aa12.26□□□□□ -0.45
MDC1-202ENST00000416571 JAG1P78504 1218 aa12.26□□□□□ -0.45
MDC1-202ENST00000416571 MDM2Q00987 491 aaPredicted RBP12.26□□□□□ -0.45
MDC1-202ENST00000416571 ZYXQ15942 572 aaKnown RBP12.26□□□□□ -0.45
MDC1-202ENST00000416571 CCL14Q16627 93 aa12.26□□□□□ -0.45
MDC1-202ENST00000416571 SHROOM1Q2M3G4 852 aaPredicted RBP12.26□□□□□ -0.45
MDC1-202ENST00000416571 TNNI3KQ59H18 835 aa12.26□□□□□ -0.45
MDC1-202ENST00000416571 MORN1Q5T089 497 aa12.26□□□□□ -0.45
MDC1-202ENST00000416571 MFSD14CQ5VZR4 134 aa12.26□□□□□ -0.45
MDC1-202ENST00000416571 ADGRA1Q86SQ6 560 aa12.26□□□□□ -0.45
MDC1-202ENST00000416571 METTL16Q86W50 562 aaKnown RBP12.26□□□□□ -0.45
MDC1-202ENST00000416571 USP6NLQ92738 828 aa12.26□□□□□ -0.45
MDC1-202ENST00000416571 CLUAP1Q96AJ1 413 aa12.26□□□□□ -0.45
MDC1-202ENST00000416571 LBHD1Q9BQE6 289 aaPredicted RBP12.26□□□□□ -0.45
MDC1-202ENST00000416571 DBNDD2Q9BQY9 259 aa12.26□□□□□ -0.45
MDC1-202ENST00000416571 GPR108Q9NPR9 543 aa12.26□□□□□ -0.45
MDC1-202ENST00000416571 RABGAP1Q9Y3P9 1069 aa12.26□□□□□ -0.45
MDC1-202ENST00000416571 IVNS1ABPQ9Y6Y0 642 aa12.26□□□□□ -0.45
MDC1-202ENST00000416571 FPGT-TNNI3KV9GXZ4 949 aa12.26□□□□□ -0.45
MDC1-202ENST00000416571 USP17L15C9J2P7 530 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 USP17L13C9JLJ4 530 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 USP17L11C9JVI0 530 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 USP17L18D6R9N7 530 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 USP17L22D6RA61 530 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 USP17L17D6RBQ6 530 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 USP17L19D6RCP7 530 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 USP17L20D6RJB6 530 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 GH2P01242 217 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms