RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 KRT222Q8N1A0 295 aa16.85■□□□□ 0.29
LINC00475-202ENST00000416438 EPSTI1Q96J88 318 aa16.85■□□□□ 0.29
LINC00475-202ENST00000416438 HOOK1Q9UJC3 728 aaKnown RBP16.85■□□□□ 0.29
LINC00475-202ENST00000416438 PPP2R2CQ9Y2T4 447 aa16.85■□□□□ 0.29
LINC00475-202ENST00000416438 SRPRBQ9Y5M8 271 aaKnown RBP16.85■□□□□ 0.29
LINC00475-202ENST00000416438 NUP98P52948 1817 aa16.85■□□□□ 0.29
LINC00475-202ENST00000416438 TNKSO95271 1327 aa16.85■□□□□ 0.29
LINC00475-202ENST00000416438 PNPLA7Q6ZV29 1317 aa16.85■□□□□ 0.29
LINC00475-202ENST00000416438 A0A087X0B3 334 aa16.85■□□□□ 0.29
LINC00475-202ENST00000416438 WNT7AO00755 349 aa16.85■□□□□ 0.29
LINC00475-202ENST00000416438 ACTN4O43707 911 aaKnown RBP16.85■□□□□ 0.29
LINC00475-202ENST00000416438 GNAT2P19087 354 aa16.85■□□□□ 0.29
LINC00475-202ENST00000416438 IGHMBP2P38935 993 aaKnown RBP16.85■□□□□ 0.29
LINC00475-202ENST00000416438 AFMP43652 599 aa16.85■□□□□ 0.29
LINC00475-202ENST00000416438 NOM1Q5C9Z4 860 aaKnown RBP16.85■□□□□ 0.29
LINC00475-202ENST00000416438 INTS5Q6P9B9 1019 aaKnown RBP16.85■□□□□ 0.29
LINC00475-202ENST00000416438 DHX58Q96C10 678 aa16.85■□□□□ 0.29
LINC00475-202ENST00000416438 BAG1Q99933 345 aaPredicted RBP16.85■□□□□ 0.29
LINC00475-202ENST00000416438 EPC1Q9H2F5 836 aa16.85■□□□□ 0.29
LINC00475-202ENST00000416438 MYH3P11055 1940 aa16.84■□□□□ 0.29
LINC00475-202ENST00000416438 ZNF18P17022 549 aa16.84■□□□□ 0.29
LINC00475-202ENST00000416438 GYG1P46976 350 aa16.84■□□□□ 0.29
LINC00475-202ENST00000416438 TBX2Q13207 712 aaPredicted RBP16.84■□□□□ 0.29
LINC00475-202ENST00000416438 TOGARAM2Q6ZUX3 1019 aa16.84■□□□□ 0.29
LINC00475-202ENST00000416438 TC2NQ8N9U0 490 aa16.84■□□□□ 0.29
LINC00475-202ENST00000416438 ACSBG1Q96GR2 724 aa16.84■□□□□ 0.29
LINC00475-202ENST00000416438 CARD6Q9BX69 1037 aa16.84■□□□□ 0.29
LINC00475-202ENST00000416438 RAI14Q9P0K7 980 aa16.84■□□□□ 0.29
LINC00475-202ENST00000416438 ANKRD36CQ5JPF3 1778 aa16.84■□□□□ 0.29
LINC00475-202ENST00000416438 H2AFXP16104 143 aaPredicted RBP16.84■□□□□ 0.29
LINC00475-202ENST00000416438 CLCN6P51797 869 aa16.84■□□□□ 0.29
LINC00475-202ENST00000416438 STX17P56962 302 aa16.84■□□□□ 0.29
LINC00475-202ENST00000416438 NT5DC1Q5TFE4 455 aa16.84■□□□□ 0.29
LINC00475-202ENST00000416438 KLHL10Q6JEL2 608 aa16.84■□□□□ 0.29
LINC00475-202ENST00000416438 ENOX1Q8TC92 643 aaKnown RBP16.84■□□□□ 0.29
LINC00475-202ENST00000416438 PHLPP2Q6ZVD8 1323 aa16.83■□□□□ 0.28
LINC00475-202ENST00000416438 CCDC196A0A1B0GTZ2 297 aa16.83■□□□□ 0.28
LINC00475-202ENST00000416438 ARHGAP6O43182 974 aa16.83■□□□□ 0.28
LINC00475-202ENST00000416438 CCP110O43303 1012 aa16.83■□□□□ 0.28
LINC00475-202ENST00000416438 DYNLL1P63167 89 aaKnown RBP16.83■□□□□ 0.28
LINC00475-202ENST00000416438 EVX2Q03828 476 aa16.83■□□□□ 0.28
LINC00475-202ENST00000416438 SEC23AQ15436 765 aa16.83■□□□□ 0.28
LINC00475-202ENST00000416438 ZNF771Q7L3S4 317 aaPredicted RBP16.83■□□□□ 0.28
LINC00475-202ENST00000416438 MLKLQ8NB16 471 aa16.83■□□□□ 0.28
LINC00475-202ENST00000416438 DESI2Q9BSY9 194 aa16.83■□□□□ 0.28
LINC00475-202ENST00000416438 NIP7Q9Y221 180 aaKnown RBP eCLIP16.83■□□□□ 0.28
LINC00475-202ENST00000416438 PLEKHA8P1O95397 391 aa16.83■□□□□ 0.28
LINC00475-202ENST00000416438 SLFN14P0C7P3 912 aa16.83■□□□□ 0.28
LINC00475-202ENST00000416438 PKN1Q16512 942 aa16.83■□□□□ 0.28
LINC00475-202ENST00000416438 CCDC152Q4G0S7 254 aa16.83■□□□□ 0.28
LINC00475-202ENST00000416438 SPECC1LQ69YQ0 1117 aa16.83■□□□□ 0.28
LINC00475-202ENST00000416438 TMTC2Q8N394 836 aa16.83■□□□□ 0.28
LINC00475-202ENST00000416438 WDR24Q96S15 920 aa16.83■□□□□ 0.28
LINC00475-202ENST00000416438 PARP3Q9Y6F1 533 aa16.83■□□□□ 0.28
LINC00475-202ENST00000416438 V9GY48 417 aaPredicted RBP16.83■□□□□ 0.28
LINC00475-202ENST00000416438 NID2Q14112 1375 aa16.82■□□□□ 0.28
LINC00475-202ENST00000416438 TEX33O43247 280 aa16.82■□□□□ 0.28
LINC00475-202ENST00000416438 COBLO75128 1261 aa16.82■□□□□ 0.28
LINC00475-202ENST00000416438 ATP6V1AP38606 617 aa16.82■□□□□ 0.28
LINC00475-202ENST00000416438 CRKLP46109 303 aaKnown RBP16.82■□□□□ 0.28
LINC00475-202ENST00000416438 MTF1Q14872 753 aa16.82■□□□□ 0.28
LINC00475-202ENST00000416438 ELOA2Q8IYF1 753 aaPredicted RBP16.82■□□□□ 0.28
LINC00475-202ENST00000416438 SMYD4Q8IYR2 804 aaPredicted RBP16.82■□□□□ 0.28
LINC00475-202ENST00000416438 STAMQ92783 540 aa16.82■□□□□ 0.28
LINC00475-202ENST00000416438 DNAJC5Q9H3Z4 198 aa16.82■□□□□ 0.28
LINC00475-202ENST00000416438 RNF41Q9H4P4 317 aaPredicted RBP16.82■□□□□ 0.28
LINC00475-202ENST00000416438 FAM53CQ9NYF3 392 aa16.82■□□□□ 0.28
LINC00475-202ENST00000416438 MAGEB6P1A0A0J9YX57 407 aa16.81■□□□□ 0.28
LINC00475-202ENST00000416438 ZSCAN12O43309 604 aa16.81■□□□□ 0.28
LINC00475-202ENST00000416438 AKAP17AQ02040 695 aaKnown RBP16.81■□□□□ 0.28
LINC00475-202ENST00000416438 ENAHQ8N8S7 591 aaPredicted RBP16.81■□□□□ 0.28
LINC00475-202ENST00000416438 ZNF579Q8NAF0 562 aaKnown RBP16.81■□□□□ 0.28
LINC00475-202ENST00000416438 MNS1Q8NEH6 495 aa16.81■□□□□ 0.28
LINC00475-202ENST00000416438 UBXN4Q92575 508 aa16.81■□□□□ 0.28
LINC00475-202ENST00000416438 TUBB4AP04350 444 aa16.81■□□□□ 0.28
LINC00475-202ENST00000416438 CD44P16070 742 aaKnown RBP16.81■□□□□ 0.28
LINC00475-202ENST00000416438 GNG11P61952 73 aa16.81■□□□□ 0.28
LINC00475-202ENST00000416438 ESR2Q92731 530 aa16.81■□□□□ 0.28
LINC00475-202ENST00000416438 MYO1BO43795 1136 aa16.8■□□□□ 0.28
LINC00475-202ENST00000416438 CAMTA2O94983 1202 aa16.8■□□□□ 0.28
LINC00475-202ENST00000416438 KARSQ15046 597 aaKnown RBP16.8■□□□□ 0.28
LINC00475-202ENST00000416438 ZNF174Q15697 407 aa16.8■□□□□ 0.28
LINC00475-202ENST00000416438 CPLX3Q8WVH0 158 aa16.8■□□□□ 0.28
LINC00475-202ENST00000416438 AK7Q96M32 723 aa16.8■□□□□ 0.28
LINC00475-202ENST00000416438 CCDC87Q9NVE4 849 aa16.8■□□□□ 0.28
LINC00475-202ENST00000416438 CEP131Q9UPN4 1083 aa16.8■□□□□ 0.28
LINC00475-202ENST00000416438 TRIM75PA6NK02 468 aa16.8■□□□□ 0.28
LINC00475-202ENST00000416438 NR1I3Q14994 352 aa16.8■□□□□ 0.28
LINC00475-202ENST00000416438 NUTM2AQ8IVF1 878 aaPredicted RBP16.8■□□□□ 0.28
LINC00475-202ENST00000416438 IRX2Q9BZI1 471 aaPredicted RBP16.8■□□□□ 0.28
LINC00475-202ENST00000416438 DACH1Q9UI36 760 aa16.8■□□□□ 0.28
LINC00475-202ENST00000416438 NTSR2O95665 410 aa16.79■□□□□ 0.28
LINC00475-202ENST00000416438 GABPB1Q06547 395 aaPredicted RBP16.79■□□□□ 0.28
LINC00475-202ENST00000416438 SYMPKQ92797 1274 aaKnown RBP16.79■□□□□ 0.28
LINC00475-202ENST00000416438 ZSCAN10Q96SZ4 725 aaPredicted RBP16.79■□□□□ 0.28
LINC00475-202ENST00000416438 RNF26Q9BY78 433 aaPredicted RBP16.79■□□□□ 0.28
LINC00475-202ENST00000416438 COL14A1Q05707 1796 aaKnown RBP16.79■□□□□ 0.28
LINC00475-202ENST00000416438 A0A0U1RQJ8 604 aa16.79■□□□□ 0.28
LINC00475-202ENST00000416438 STX10O60499 249 aa16.79■□□□□ 0.28
LINC00475-202ENST00000416438 KIF20AO95235 890 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms