RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 GPR25O00155 361 aa17.59■□□□□ 0.41
CHD1-202ENST00000414220 SLC3A2P08195 630 aaKnown RBP17.59■□□□□ 0.41
CHD1-202ENST00000414220 SPP2Q13103 211 aa17.59■□□□□ 0.41
CHD1-202ENST00000414220 ARHGEF6Q15052 776 aa17.59■□□□□ 0.41
CHD1-202ENST00000414220 GADL1Q6ZQY3 521 aa17.59■□□□□ 0.41
CHD1-202ENST00000414220 CENPQQ7L2Z9 268 aaPredicted RBP17.59■□□□□ 0.41
CHD1-202ENST00000414220 PRRT2Q7Z6L0 340 aaPredicted RBP17.59■□□□□ 0.41
CHD1-202ENST00000414220 WDR18Q9BV38 432 aa17.59■□□□□ 0.41
CHD1-202ENST00000414220 DNAJC18Q9H819 358 aa17.59■□□□□ 0.41
CHD1-202ENST00000414220 ZBTB21Q9ULJ3 1066 aa17.59■□□□□ 0.41
CHD1-202ENST00000414220 C19orf81C9J6K1 198 aa17.58■□□□□ 0.4
CHD1-202ENST00000414220 BTBD19C9JJ37 291 aa17.58■□□□□ 0.4
CHD1-202ENST00000414220 M0R2C6 588 aa17.58■□□□□ 0.4
CHD1-202ENST00000414220 MPHOSPH10O00566 681 aaKnown RBP17.58■□□□□ 0.4
CHD1-202ENST00000414220 FKTNO75072 461 aa17.58■□□□□ 0.4
CHD1-202ENST00000414220 MCMDC2Q4G0Z9 681 aa17.58■□□□□ 0.4
CHD1-202ENST00000414220 SBK1Q52WX2 424 aa17.58■□□□□ 0.4
CHD1-202ENST00000414220 CTR9Q6PD62 1173 aa17.58■□□□□ 0.4
CHD1-202ENST00000414220 TNS4Q8IZW8 715 aa17.58■□□□□ 0.4
CHD1-202ENST00000414220 FAM43AQ8N2R8 423 aa17.58■□□□□ 0.4
CHD1-202ENST00000414220 CCDC17Q96LX7 622 aa17.58■□□□□ 0.4
CHD1-202ENST00000414220 NAPBQ9H115 298 aa17.58■□□□□ 0.4
CHD1-202ENST00000414220 TMOD4Q9NZQ9 345 aa17.58■□□□□ 0.4
CHD1-202ENST00000414220 FOCADQ5VW36 1801 aa17.58■□□□□ 0.4
CHD1-202ENST00000414220 MYH7P12883 1935 aa17.57■□□□□ 0.4
CHD1-202ENST00000414220 GSG1L2A8MUP6 293 aa17.57■□□□□ 0.4
CHD1-202ENST00000414220 MINDY4BA8MYZ0 360 aa17.57■□□□□ 0.4
CHD1-202ENST00000414220 PDHXO00330 501 aa17.57■□□□□ 0.4
CHD1-202ENST00000414220 GH2P01242 217 aa17.57■□□□□ 0.4
CHD1-202ENST00000414220 GABPAQ06546 454 aa17.57■□□□□ 0.4
CHD1-202ENST00000414220 CRHR2Q13324 411 aa17.57■□□□□ 0.4
CHD1-202ENST00000414220 RAB3GAP1Q15042 981 aa17.57■□□□□ 0.4
CHD1-202ENST00000414220 IFNL3Q8IZI9 196 aa17.57■□□□□ 0.4
CHD1-202ENST00000414220 PROCA1Q8NCQ7 364 aaPredicted RBP17.57■□□□□ 0.4
CHD1-202ENST00000414220 CCDC136Q96JN2 1154 aa17.57■□□□□ 0.4
CHD1-202ENST00000414220 SEC62Q99442 399 aaKnown RBP17.57■□□□□ 0.4
CHD1-202ENST00000414220 PARK7Q99497 189 aaKnown RBP17.57■□□□□ 0.4
CHD1-202ENST00000414220 DIAPH3Q9NSV4 1193 aa17.57■□□□□ 0.4
CHD1-202ENST00000414220 PNMA3Q9UL41 463 aa17.57■□□□□ 0.4
CHD1-202ENST00000414220 SLC45A1Q9Y2W3 748 aa17.57■□□□□ 0.4
CHD1-202ENST00000414220 MYH1P12882 1939 aa17.57■□□□□ 0.4
CHD1-202ENST00000414220 PCNTO95613 3336 aa17.56■□□□□ 0.4
CHD1-202ENST00000414220 USP17L10C9JJH3 530 aa17.56■□□□□ 0.4
CHD1-202ENST00000414220 SDSP20132 328 aa17.56■□□□□ 0.4
CHD1-202ENST00000414220 SHMT1P34896 483 aa17.56■□□□□ 0.4
CHD1-202ENST00000414220 USP14P54578 494 aa17.56■□□□□ 0.4
CHD1-202ENST00000414220 RRP1BQ14684 758 aaKnown RBP17.56■□□□□ 0.4
CHD1-202ENST00000414220 ZNF296Q8WUU4 475 aaPredicted RBP17.56■□□□□ 0.4
CHD1-202ENST00000414220 ERO1AQ96HE7 468 aa17.56■□□□□ 0.4
CHD1-202ENST00000414220 MKNK2Q9HBH9 465 aa17.56■□□□□ 0.4
CHD1-202ENST00000414220 CYP2D6P10635 497 aa17.55■□□□□ 0.4
CHD1-202ENST00000414220 OSBPP22059 807 aa17.55■□□□□ 0.4
CHD1-202ENST00000414220 CDK8P49336 464 aa17.55■□□□□ 0.4
CHD1-202ENST00000414220 BACE1P56817 501 aa17.55■□□□□ 0.4
CHD1-202ENST00000414220 SP3Q02447 781 aa17.55■□□□□ 0.4
CHD1-202ENST00000414220 KIF22Q14807 665 aa17.55■□□□□ 0.4
CHD1-202ENST00000414220 TMEM179Q6ZVK1 233 aa17.55■□□□□ 0.4
CHD1-202ENST00000414220 C16orf86Q6ZW13 317 aa17.55■□□□□ 0.4
CHD1-202ENST00000414220 CCDC84Q86UT8 332 aaPredicted RBP17.55■□□□□ 0.4
CHD1-202ENST00000414220 DYNLL2Q96FJ2 89 aa17.55■□□□□ 0.4
CHD1-202ENST00000414220 FEZ1Q99689 392 aa17.55■□□□□ 0.4
CHD1-202ENST00000414220 AGTPBP1Q9UPW5 1226 aa17.55■□□□□ 0.4
CHD1-202ENST00000414220 CDK5RAP2Q96SN8 1893 aa17.54■□□□□ 0.4
CHD1-202ENST00000414220 TLR2O60603 784 aa17.54■□□□□ 0.4
CHD1-202ENST00000414220 PDE4BQ07343 736 aa17.54■□□□□ 0.4
CHD1-202ENST00000414220 SH3D19Q5HYK7 790 aa17.54■□□□□ 0.4
CHD1-202ENST00000414220 TTC22Q5TAA0 569 aa17.54■□□□□ 0.4
CHD1-202ENST00000414220 USP17L2Q6R6M4 530 aa17.54■□□□□ 0.4
CHD1-202ENST00000414220 ZNF444Q8N0Y2 327 aaPredicted RBP17.54■□□□□ 0.4
CHD1-202ENST00000414220 SH2D4AQ9H788 454 aa17.54■□□□□ 0.4
CHD1-202ENST00000414220 DOCK1Q14185 1865 aa17.54■□□□□ 0.4
CHD1-202ENST00000414220 NAV1Q8NEY1 1877 aa17.54■□□□□ 0.4
CHD1-202ENST00000414220 PDE4AP27815 886 aa17.53■□□□□ 0.4
CHD1-202ENST00000414220 HMGCS2P54868 508 aa17.53■□□□□ 0.4
CHD1-202ENST00000414220 NMIQ13287 307 aaPredicted RBP17.53■□□□□ 0.4
CHD1-202ENST00000414220 DGKZQ13574 1117 aa17.53■□□□□ 0.4
CHD1-202ENST00000414220 MTMR2Q13614 643 aa17.53■□□□□ 0.4
CHD1-202ENST00000414220 PKN2Q16513 984 aaKnown RBP17.53■□□□□ 0.4
CHD1-202ENST00000414220 CTU1Q7Z7A3 348 aaKnown RBP17.53■□□□□ 0.4
CHD1-202ENST00000414220 SMCR8Q8TEV9 937 aaPredicted RBP17.53■□□□□ 0.4
CHD1-202ENST00000414220 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.53■□□□□ 0.4
CHD1-202ENST00000414220 CYP2D7A0A087X1C5 515 aa17.52■□□□□ 0.4
CHD1-202ENST00000414220 MOGSQ13724 837 aa17.52■□□□□ 0.4
CHD1-202ENST00000414220 ERICH6BQ5W0A0 696 aa17.52■□□□□ 0.4
CHD1-202ENST00000414220 GPAT2Q6NUI2 795 aa17.52■□□□□ 0.4
CHD1-202ENST00000414220 CWC27Q6UX04 472 aaKnown RBP17.52■□□□□ 0.4
CHD1-202ENST00000414220 RUFY2Q8WXA3 655 aa17.52■□□□□ 0.4
CHD1-202ENST00000414220 FAM227BQ96M60 508 aa17.52■□□□□ 0.4
CHD1-202ENST00000414220 ARHGEF10LQ9HCE6 1279 aa17.52■□□□□ 0.4
CHD1-202ENST00000414220 A0A0D9SFI3 127 aa17.51■□□□□ 0.39
CHD1-202ENST00000414220 CCDC129Q6ZRS4 1044 aa17.51■□□□□ 0.39
CHD1-202ENST00000414220 SLC44A5Q8NCS7 719 aa17.51■□□□□ 0.39
CHD1-202ENST00000414220 R3HDMLQ9H3Y0 253 aa17.51■□□□□ 0.39
CHD1-202ENST00000414220 EPB41L4AQ9HCS5 686 aaPredicted RBP17.51■□□□□ 0.39
CHD1-202ENST00000414220 CCDC171Q6TFL3 1326 aa17.5■□□□□ 0.39
CHD1-202ENST00000414220 IRX3P78415 501 aaPredicted RBP17.5■□□□□ 0.39
CHD1-202ENST00000414220 JAG1P78504 1218 aa17.5■□□□□ 0.39
CHD1-202ENST00000414220 PPARAQ07869 468 aa17.5■□□□□ 0.39
CHD1-202ENST00000414220 SEPT2Q15019 361 aa17.5■□□□□ 0.39
CHD1-202ENST00000414220 ALX1Q15699 326 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms