RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 RGS17Q9UGC6 210 aaPredicted RBP7.67□□□□□ -1.18
NOD1-203ENST00000413433 DYRK1BQ9Y463 629 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.67□□□□□ -1.18
NOD1-203ENST00000413433 ABCC5O15440 1437 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 A0A096LPE4 126 aa7.66□□□□□ -1.18
NOD1-203ENST00000413433 A0A1W2PPZ6 126 aa7.66□□□□□ -1.18
NOD1-203ENST00000413433 METTL12A8MUP2 240 aa7.66□□□□□ -1.18
NOD1-203ENST00000413433 KHNYNO15037 678 aaKnown RBP7.66□□□□□ -1.18
NOD1-203ENST00000413433 F11P03951 625 aa7.66□□□□□ -1.18
NOD1-203ENST00000413433 MAP2K3P46734 347 aa7.66□□□□□ -1.18
NOD1-203ENST00000413433 SNRPNP63162 240 aaKnown RBP7.66□□□□□ -1.18
NOD1-203ENST00000413433 SFSWAPQ12872 951 aaKnown RBP7.66□□□□□ -1.18
NOD1-203ENST00000413433 FAM50AQ14320 339 aaKnown RBP7.66□□□□□ -1.18
NOD1-203ENST00000413433 PPP2R5EQ16537 467 aa7.66□□□□□ -1.18
NOD1-203ENST00000413433 RPS26P11Q5JNZ5 115 aaPredicted RBP7.66□□□□□ -1.18
NOD1-203ENST00000413433 KIAA0907Q7Z7F0 614 aaPredicted RBP7.66□□□□□ -1.18
NOD1-203ENST00000413433 IRF2BPLQ9H1B7 796 aa7.66□□□□□ -1.18
NOD1-203ENST00000413433 ZNF576Q9H609 170 aa7.66□□□□□ -1.18
NOD1-203ENST00000413433 TMEM39AQ9NV64 488 aa7.66□□□□□ -1.18
NOD1-203ENST00000413433 TLR7Q9NYK1 1049 aaKnown RBP7.66□□□□□ -1.18
NOD1-203ENST00000413433 SCAF11Q99590 1463 aaKnown RBP7.66□□□□□ -1.18
NOD1-203ENST00000413433 DCDC2BA2VCK2 349 aa7.65□□□□□ -1.18
NOD1-203ENST00000413433 ATXN7O15265 892 aaPredicted RBP7.65□□□□□ -1.18
NOD1-203ENST00000413433 PAGE1O75459 146 aa7.65□□□□□ -1.18
NOD1-203ENST00000413433 TRPA1O75762 1119 aa7.65□□□□□ -1.18
NOD1-203ENST00000413433 POLR1AO95602 1720 aaPredicted RBP7.65□□□□□ -1.18
NOD1-203ENST00000413433 FAM157BP0CG42 384 aa7.65□□□□□ -1.18
NOD1-203ENST00000413433 C2orf27AQ580R0 203 aa7.65□□□□□ -1.18
NOD1-203ENST00000413433 RPUSD2Q8IZ73 545 aaKnown RBP7.65□□□□□ -1.18
NOD1-203ENST00000413433 PRPF38AQ8NAV1 312 aaKnown RBP7.65□□□□□ -1.18
NOD1-203ENST00000413433 THAP3Q8WTV1 239 aaPredicted RBP7.65□□□□□ -1.18
NOD1-203ENST00000413433 NSUN5Q96P11 429 aaKnown RBP7.65□□□□□ -1.18
NOD1-203ENST00000413433 BHLHE41Q9C0J9 482 aaPredicted RBP7.65□□□□□ -1.18
NOD1-203ENST00000413433 ZFATQ9P243 1243 aa7.65□□□□□ -1.18
NOD1-203ENST00000413433 CHPF2Q9P2E5 772 aa7.65□□□□□ -1.18
NOD1-203ENST00000413433 ZNRF3Q9ULT6 936 aa7.65□□□□□ -1.18
NOD1-203ENST00000413433 PCDHB5Q9Y5E4 795 aa7.65□□□□□ -1.18
NOD1-203ENST00000413433 DEPDC5O75140 1603 aa7.64□□□□□ -1.19
NOD1-203ENST00000413433 TMEM94Q12767 1356 aa7.64□□□□□ -1.19
NOD1-203ENST00000413433 KANK1Q14678 1352 aa7.64□□□□□ -1.19
NOD1-203ENST00000413433 TMEM2Q9UHN6 1383 aa7.64□□□□□ -1.19
NOD1-203ENST00000413433 DDAH1O94760 285 aa7.64□□□□□ -1.19
NOD1-203ENST00000413433 KCNA6P17658 529 aa7.64□□□□□ -1.19
NOD1-203ENST00000413433 AMPD3Q01432 767 aa7.64□□□□□ -1.19
NOD1-203ENST00000413433 COL13A1Q5TAT6 717 aaPredicted RBP7.64□□□□□ -1.19
NOD1-203ENST00000413433 REC114Q7Z4M0 266 aa7.64□□□□□ -1.19
NOD1-203ENST00000413433 KRTAP1-3Q8IUG1 177 aa7.64□□□□□ -1.19
NOD1-203ENST00000413433 REXO1Q8N1G1 1221 aaKnown RBP7.64□□□□□ -1.19
NOD1-203ENST00000413433 TMEM102Q8N9M5 508 aaPredicted RBP7.64□□□□□ -1.19
NOD1-203ENST00000413433 BRMS1Q9HCU9 246 aa7.64□□□□□ -1.19
NOD1-203ENST00000413433 G3BP2Q9UN86 482 aaKnown RBP7.64□□□□□ -1.19
NOD1-203ENST00000413433 LEMD3Q9Y2U8 911 aa7.64□□□□□ -1.19
NOD1-203ENST00000413433 STRCP1A6NGW2 1772 aa7.64□□□□□ -1.19
NOD1-203ENST00000413433 IQGAP1P46940 1657 aa7.63□□□□□ -1.19
NOD1-203ENST00000413433 MROH1Q8NDA8 1641 aa7.63□□□□□ -1.19
NOD1-203ENST00000413433 DUOX2Q9NRD8 1548 aa7.63□□□□□ -1.19
NOD1-203ENST00000413433 DAPK1P53355 1430 aa7.63□□□□□ -1.19
NOD1-203ENST00000413433 KDM2BQ8NHM5 1336 aa7.63□□□□□ -1.19
NOD1-203ENST00000413433 PDE2AO00408 941 aaPredicted RBP7.63□□□□□ -1.19
NOD1-203ENST00000413433 COL8A1P27658 744 aa7.63□□□□□ -1.19
NOD1-203ENST00000413433 ZNF157P51786 506 aaPredicted RBP7.63□□□□□ -1.19
NOD1-203ENST00000413433 SQSTM1Q13501 440 aa7.63□□□□□ -1.19
NOD1-203ENST00000413433 LBRQ14739 615 aaKnown RBP7.63□□□□□ -1.19
NOD1-203ENST00000413433 LRRC14Q15048 493 aa7.63□□□□□ -1.19
NOD1-203ENST00000413433 TCEA2Q15560 299 aa7.63□□□□□ -1.19
NOD1-203ENST00000413433 LSRQ86X29 649 aaPredicted RBP7.63□□□□□ -1.19
NOD1-203ENST00000413433 CEP120Q8N960 986 aa7.63□□□□□ -1.19
NOD1-203ENST00000413433 PSMD1Q99460 953 aa7.63□□□□□ -1.19
NOD1-203ENST00000413433 EFCC1Q9HA90 598 aa7.63□□□□□ -1.19
NOD1-203ENST00000413433 RRAGCQ9HB90 399 aa7.63□□□□□ -1.19
NOD1-203ENST00000413433 RNF17Q9BXT8 1623 aaKnown RBP7.63□□□□□ -1.19
NOD1-203ENST00000413433 MAST1Q9Y2H9 1570 aa7.63□□□□□ -1.19
NOD1-203ENST00000413433 CFAP65Q6ZU64 1925 aaKnown RBP7.62□□□□□ -1.19
NOD1-203ENST00000413433 ANKRD30AQ9BXX3 1397 aa7.62□□□□□ -1.19
NOD1-203ENST00000413433 PIK3R2O00459 728 aa7.62□□□□□ -1.19
NOD1-203ENST00000413433 GJB6O95452 261 aa7.62□□□□□ -1.19
NOD1-203ENST00000413433 FAAP100Q0VG06 881 aa7.62□□□□□ -1.19
NOD1-203ENST00000413433 DHX32Q7L7V1 743 aaKnown RBP7.62□□□□□ -1.19
NOD1-203ENST00000413433 CERS3Q8IU89 383 aa7.62□□□□□ -1.19
NOD1-203ENST00000413433 BHMTQ93088 406 aa7.62□□□□□ -1.19
NOD1-203ENST00000413433 NXPE3Q969Y0 559 aa7.62□□□□□ -1.19
NOD1-203ENST00000413433 PLD4Q96BZ4 506 aa7.62□□□□□ -1.19
NOD1-203ENST00000413433 HHIPQ96QV1 700 aa7.62□□□□□ -1.19
NOD1-203ENST00000413433 CEP89Q96ST8 783 aa7.62□□□□□ -1.19
NOD1-203ENST00000413433 CBX8Q9HC52 389 aa7.62□□□□□ -1.19
NOD1-203ENST00000413433 TYW1Q9NV66 732 aaKnown RBP7.62□□□□□ -1.19
NOD1-203ENST00000413433 PFDN2Q9UHV9 154 aa7.62□□□□□ -1.19
NOD1-203ENST00000413433 CYP8B1Q9UNU6 501 aa7.62□□□□□ -1.19
NOD1-203ENST00000413433 SUGT1Q9Y2Z0 365 aa7.62□□□□□ -1.19
NOD1-203ENST00000413433 PCDHGC4Q9Y5F7 938 aa7.62□□□□□ -1.19
NOD1-203ENST00000413433 ARHGAP23Q9P227 1491 aa7.62□□□□□ -1.19
NOD1-203ENST00000413433 ARHGAP31Q2M1Z3 1444 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 ERBINQ96RT1 1412 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 CEP152O94986 1710 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 FAM221AA4D161 298 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 SHISA8B8ZZ34 492 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 EFSO43281 561 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 CILPO75339 1184 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 MAP3K6O95382 1288 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 HOXD8P13378 290 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms