RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 HCLS1P14317 486 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 GMPRP36959 345 aa6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 YARSP54577 528 aaKnown RBP6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 NCAPHQ15003 741 aa6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 RNF187Q5TA31 235 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 CDC37L1Q7L3B6 337 aa6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 EEPD1Q7L9B9 569 aa6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 DYMQ7RTS9 669 aa6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 FBXO11Q86XK2 927 aa6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 HOMER1Q86YM7 354 aa6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 HID1Q8IV36 788 aa6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 FMR1NBQ8N0W7 255 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 TMEM87BQ96K49 555 aa6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 KIF2CQ99661 725 aa6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 DPH2Q9BQC3 489 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 TMPRSS13Q9BYE2 586 aa6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 PHAXQ9H814 394 aaKnown RBP6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 DISC1Q9NRI5 854 aa6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 FAM86C1Q9NVL1 165 aa6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 CRIM1Q9NZV1 1036 aa6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 GBP1P32455 592 aa6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 SLC7A5Q01650 507 aa6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 SQSTM1Q13501 440 aa6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 TTLL4Q14679 1199 aa6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 PLEKHG4Q58EX7 1191 aa6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 MCATQ8IVS2 390 aaKnown RBP6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 C12orf50Q8NA57 414 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 RNF214Q8ND24 703 aa6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 THAP3Q8WTV1 239 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 TRIM11Q96F44 468 aa6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 SLKQ9H2G2 1235 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 ATXN3LQ9H3M9 355 aa6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 FBRSQ9HAH7 460 aa6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 PIDD1Q9HB75 910 aa6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 CYP4F12Q9HCS2 524 aa6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 SSU72Q9NP77 194 aaKnown RBP6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 ZMYM5Q9UJ78 669 aa6.87□□□□□ -1.31
HMGB3P31-201ENST00000413333 SYNGAP1Q96PV0 1343 aa6.86□□□□□ -1.31
HMGB3P31-201ENST00000413333 FAM229AH3BQW9 127 aa6.86□□□□□ -1.31
HMGB3P31-201ENST00000413333 ADH5P11766 374 aa6.86□□□□□ -1.31
HMGB3P31-201ENST00000413333 DRD2P14416 443 aa6.86□□□□□ -1.31
HMGB3P31-201ENST00000413333 C2orf27AQ580R0 203 aa6.86□□□□□ -1.31
HMGB3P31-201ENST00000413333 SLC6A19Q695T7 634 aa6.86□□□□□ -1.31
HMGB3P31-201ENST00000413333 KIAA1211Q6ZU35 1233 aa6.86□□□□□ -1.31
HMGB3P31-201ENST00000413333 FILIP1Q7Z7B0 1213 aa6.86□□□□□ -1.31
HMGB3P31-201ENST00000413333 ST13P5Q8NFI4 369 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P31-201ENST00000413333 XAGE3Q8WTP9 111 aa6.86□□□□□ -1.31
HMGB3P31-201ENST00000413333 PLVAPQ9BX97 442 aa6.86□□□□□ -1.31
HMGB3P31-201ENST00000413333 RNF208Q9H0X6 261 aa6.86□□□□□ -1.31
HMGB3P31-201ENST00000413333 CWC22Q9HCG8 908 aaKnown RBP6.86□□□□□ -1.31
HMGB3P31-201ENST00000413333 SUSD5O60279 629 aa6.85□□□□□ -1.31
HMGB3P31-201ENST00000413333 TP53P04637 393 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P31-201ENST00000413333 HOXB4P17483 251 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P31-201ENST00000413333 SOX4Q06945 474 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P31-201ENST00000413333 TRIM28Q13263 835 aaKnown RBP6.85□□□□□ -1.31
HMGB3P31-201ENST00000413333 NKG7Q16617 165 aa6.85□□□□□ -1.31
HMGB3P31-201ENST00000413333 PTPROQ16827 1216 aa6.85□□□□□ -1.31
HMGB3P31-201ENST00000413333 TDRD10Q5VZ19 366 aaKnown RBP6.85□□□□□ -1.31
HMGB3P31-201ENST00000413333 MRPL41Q8IXM3 137 aaKnown RBP6.85□□□□□ -1.31
HMGB3P31-201ENST00000413333 KLHL6Q8WZ60 621 aa6.85□□□□□ -1.31
HMGB3P31-201ENST00000413333 GPATCH3Q96I76 525 aa6.85□□□□□ -1.31
HMGB3P31-201ENST00000413333 CCDC74BQ96LY2 380 aa6.85□□□□□ -1.31
HMGB3P31-201ENST00000413333 SLC6A18Q96N87 628 aa6.85□□□□□ -1.31
HMGB3P31-201ENST00000413333 ENAMQ9NRM1 1142 aa6.85□□□□□ -1.31
HMGB3P31-201ENST00000413333 TMEM260Q9NX78 707 aa6.85□□□□□ -1.31
HMGB3P31-201ENST00000413333 PTCH2Q9Y6C5 1203 aa6.85□□□□□ -1.31
HMGB3P31-201ENST00000413333 MEGF11A6BM72 1044 aa6.84□□□□□ -1.31
HMGB3P31-201ENST00000413333 PPP1R12AO14974 1030 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P31-201ENST00000413333 NEFMP07197 916 aa6.84□□□□□ -1.31
HMGB3P31-201ENST00000413333 NTF4P34130 210 aa6.84□□□□□ -1.31
HMGB3P31-201ENST00000413333 ASPAP45381 313 aa6.84□□□□□ -1.31
HMGB3P31-201ENST00000413333 FDX2Q6P4F2 183 aa6.84□□□□□ -1.31
HMGB3P31-201ENST00000413333 C16orf86Q6ZW13 317 aa6.84□□□□□ -1.31
HMGB3P31-201ENST00000413333 UBE3DQ7Z6J8 389 aa6.84□□□□□ -1.31
HMGB3P31-201ENST00000413333 TMEM192Q8IY95 271 aa6.84□□□□□ -1.31
HMGB3P31-201ENST00000413333 SLFN12Q8IYM2 578 aa6.84□□□□□ -1.31
HMGB3P31-201ENST00000413333 SVOPQ8N4V2 548 aa6.84□□□□□ -1.31
HMGB3P31-201ENST00000413333 KCT2Q8NC54 265 aa6.84□□□□□ -1.31
HMGB3P31-201ENST00000413333 SMG8Q8ND04 991 aaKnown RBP6.84□□□□□ -1.31
HMGB3P31-201ENST00000413333 BAHD1Q8TBE0 780 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P31-201ENST00000413333 IFT57Q9NWB7 429 aa6.84□□□□□ -1.31
HMGB3P31-201ENST00000413333 ZNF214Q9UL59 606 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P31-201ENST00000413333 RGS13O14921 159 aa6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 ASMTLO95671 621 aa6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 FAM153BP0C7A2 387 aa6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 IBSPP21815 317 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 GYS2P54840 703 aa6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 SNRPNP63162 240 aaKnown RBP6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 SLBPQ14493 270 aaKnown RBP eCLIP6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 SLC10A6Q3KNW5 377 aa6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 SV2CQ496J9 727 aa6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 LCE2CQ5TA81 110 aa6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 PRAMEF13Q5VWM6 474 aa6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 ZNF385CQ66K41 422 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 AGGF1Q8N302 714 aaeCLIP6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 PPP1R14AQ96A00 147 aa6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 ISL2Q96A47 359 aa6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 DHRS1Q96LJ7 313 aa6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 SPATA9Q9BWV2 254 aa6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 MRPL18Q9H0U6 180 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms