RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 TMOD4Q9NZQ9 345 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 PHIPQ8WWQ0 1821 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 DOCK2Q92608 1830 aa8.64□□□□□ -1.03
LSM8-202ENST00000411938 MYBBP1AQ9BQG0 1328 aaKnown RBP8.63□□□□□ -1.03
LSM8-202ENST00000411938 USP17L5A8MUK1 530 aa8.63□□□□□ -1.03
LSM8-202ENST00000411938 GLRX3O76003 335 aaKnown RBP8.63□□□□□ -1.03
LSM8-202ENST00000411938 SLC5A1P13866 664 aa8.63□□□□□ -1.03
LSM8-202ENST00000411938 IGFBP4P22692 258 aa8.63□□□□□ -1.03
LSM8-202ENST00000411938 EPHB4P54760 987 aa8.63□□□□□ -1.03
LSM8-202ENST00000411938 HERVK_113P62684 666 aa8.63□□□□□ -1.03
LSM8-202ENST00000411938 ATP2B2Q01814 1243 aa8.63□□□□□ -1.03
LSM8-202ENST00000411938 MTMR2Q13614 643 aa8.63□□□□□ -1.03
LSM8-202ENST00000411938 Q3C1V9 767 aa8.63□□□□□ -1.03
LSM8-202ENST00000411938 SH3D19Q5HYK7 790 aa8.63□□□□□ -1.03
LSM8-202ENST00000411938 WDR78Q5VTH9 848 aa8.63□□□□□ -1.03
LSM8-202ENST00000411938 EDC3Q96F86 508 aaKnown RBP8.63□□□□□ -1.03
LSM8-202ENST00000411938 SUCLG2Q96I99 432 aa8.63□□□□□ -1.03
LSM8-202ENST00000411938 LRFN3Q9BTN0 628 aa8.63□□□□□ -1.03
LSM8-202ENST00000411938 TBC1D2Q9BYX2 928 aa8.63□□□□□ -1.03
LSM8-202ENST00000411938 OSBPL5Q9H0X9 879 aaPredicted RBP8.63□□□□□ -1.03
LSM8-202ENST00000411938 AS3MTQ9HBK9 375 aa8.63□□□□□ -1.03
LSM8-202ENST00000411938 DDX4Q9NQI0 724 aaKnown RBP8.63□□□□□ -1.03
LSM8-202ENST00000411938 RBPJLQ9UBG7 517 aa8.63□□□□□ -1.03
LSM8-202ENST00000411938 RBM19Q9Y4C8 960 aaKnown RBP8.63□□□□□ -1.03
LSM8-202ENST00000411938 NDUFB9Q9Y6M9 179 aa8.63□□□□□ -1.03
LSM8-202ENST00000411938 UTYO14607 1347 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 KIF16BQ96L93 1317 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 TBC1D12O60347 775 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 RAG1P15918 1043 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 FGFR2P21802 821 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 HOXA7P31268 230 aaPredicted RBP8.62□□□□□ -1.03
LSM8-202ENST00000411938 CYP2C19P33261 490 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 CAP2P40123 477 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 ADCYAP1R1P41586 468 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 ERVK-9P63128 1117 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 ERVK-24P63145 666 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 IRX6P78412 446 aaPredicted RBP8.62□□□□□ -1.03
LSM8-202ENST00000411938 TLE2Q04725 743 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 NCBP3Q53F19 620 aaKnown RBP8.62□□□□□ -1.03
LSM8-202ENST00000411938 SLC4A10Q6U841 1118 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 CCDC129Q6ZRS4 1044 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 ALYREFQ86V81 257 aaKnown RBP8.62□□□□□ -1.03
LSM8-202ENST00000411938 FERMT2Q96AC1 680 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 TSPYL2Q9H2G4 693 aaPredicted RBP8.62□□□□□ -1.03
LSM8-202ENST00000411938 FLRT1Q9NZU1 646 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 TACC3Q9Y6A5 838 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 CACNA1AO00555 2505 aa8.62□□□□□ -1.03
LSM8-202ENST00000411938 TCF20Q9UGU0 1960 aaKnown RBP8.62□□□□□ -1.03
LSM8-202ENST00000411938 ALDH1L1O75891 902 aa8.61□□□□□ -1.03
LSM8-202ENST00000411938 ITGB8P26012 769 aa8.61□□□□□ -1.03
LSM8-202ENST00000411938 FPGSQ05932 587 aa8.61□□□□□ -1.03
LSM8-202ENST00000411938 SNX17Q15036 470 aa8.61□□□□□ -1.03
LSM8-202ENST00000411938 TMEM31Q5JXX7 168 aa8.61□□□□□ -1.03
LSM8-202ENST00000411938 ANO1Q5XXA6 986 aa8.61□□□□□ -1.03
LSM8-202ENST00000411938 DZIP1Q86YF9 867 aaKnown RBP8.61□□□□□ -1.03
LSM8-202ENST00000411938 TRPV1Q8NER1 839 aa8.61□□□□□ -1.03
LSM8-202ENST00000411938 KLHDC4Q8TBB5 520 aa8.61□□□□□ -1.03
LSM8-202ENST00000411938 LPIN2Q92539 896 aa8.61□□□□□ -1.03
LSM8-202ENST00000411938 KAZALD1Q96I82 304 aa8.61□□□□□ -1.03
LSM8-202ENST00000411938 SNX27Q96L92 541 aa8.61□□□□□ -1.03
LSM8-202ENST00000411938 EPHX3Q9H6B9 360 aa8.61□□□□□ -1.03
LSM8-202ENST00000411938 GNL3LQ9NVN8 582 aaKnown RBP8.61□□□□□ -1.03
LSM8-202ENST00000411938 LOC285556D6RIA3 1793 aa8.61□□□□□ -1.03
LSM8-202ENST00000411938 RFX7Q2KHR2 1363 aa8.61□□□□□ -1.03
LSM8-202ENST00000411938 GAKO14976 1311 aa8.6□□□□□ -1.03
LSM8-202ENST00000411938 FANCIQ9NVI1 1328 aa8.6□□□□□ -1.03
LSM8-202ENST00000411938 FRMPD3Q5JV73 1810 aa8.6□□□□□ -1.03
LSM8-202ENST00000411938 SLC15A5A6NIM6 579 aa8.6□□□□□ -1.03
LSM8-202ENST00000411938 CLTBP09497 229 aa8.6□□□□□ -1.03
LSM8-202ENST00000411938 NBPF7P0C2Y1 421 aaPredicted RBP8.6□□□□□ -1.03
LSM8-202ENST00000411938 BMP1P13497 986 aa8.6□□□□□ -1.03
LSM8-202ENST00000411938 BTDP43251 543 aa8.6□□□□□ -1.03
LSM8-202ENST00000411938 BACE1P56817 501 aa8.6□□□□□ -1.03
LSM8-202ENST00000411938 CCNA1P78396 465 aa8.6□□□□□ -1.03
LSM8-202ENST00000411938 ADGRE1Q14246 886 aa8.6□□□□□ -1.03
LSM8-202ENST00000411938 RRP1BQ14684 758 aaKnown RBP8.6□□□□□ -1.03
LSM8-202ENST00000411938 SLF2Q8IX21 1173 aa8.6□□□□□ -1.03
LSM8-202ENST00000411938 GTF3C2Q8WUA4 911 aaPredicted RBP8.6□□□□□ -1.03
LSM8-202ENST00000411938 WDR18Q9BV38 432 aa8.6□□□□□ -1.03
LSM8-202ENST00000411938 SRCIN1Q9C0H9 1055 aa8.6□□□□□ -1.03
LSM8-202ENST00000411938 BICC1Q9H694 974 aaKnown RBP8.6□□□□□ -1.03
LSM8-202ENST00000411938 CXXC1Q9P0U4 656 aaPredicted RBP8.6□□□□□ -1.03
LSM8-202ENST00000411938 IVNS1ABPQ9Y6Y0 642 aa8.6□□□□□ -1.03
LSM8-202ENST00000411938 SALL1Q9NSC2 1324 aa8.59□□□□□ -1.03
LSM8-202ENST00000411938 RLFQ13129 1914 aa8.59□□□□□ -1.03
LSM8-202ENST00000411938 GRXCR1A8MXD5 290 aa8.59□□□□□ -1.03
LSM8-202ENST00000411938 C19orf81C9J6K1 198 aa8.59□□□□□ -1.03
LSM8-202ENST00000411938 KIAA0355O15063 1070 aa8.59□□□□□ -1.03
LSM8-202ENST00000411938 PQBP1O60828 265 aaKnown RBP8.59□□□□□ -1.03
LSM8-202ENST00000411938 CYBAP13498 195 aa8.59□□□□□ -1.03
LSM8-202ENST00000411938 PTPREP23469 700 aa8.59□□□□□ -1.03
LSM8-202ENST00000411938 PBX2P40425 430 aa8.59□□□□□ -1.03
LSM8-202ENST00000411938 AAK1Q2M2I8 961 aa8.59□□□□□ -1.03
LSM8-202ENST00000411938 MICALL1Q8N3F8 863 aa8.59□□□□□ -1.03
LSM8-202ENST00000411938 ZGPATQ8N5A5 531 aaKnown RBP8.59□□□□□ -1.03
LSM8-202ENST00000411938 PBX4Q9BYU1 374 aa8.59□□□□□ -1.03
LSM8-202ENST00000411938 ABCF2Q9UG63 623 aa8.59□□□□□ -1.03
LSM8-202ENST00000411938 DENND2AQ9ULE3 1009 aa8.59□□□□□ -1.03
LSM8-202ENST00000411938 MYH2Q9UKX2 1941 aa8.58□□□□□ -1.04
LSM8-202ENST00000411938 MYH13Q9UKX3 1938 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms