RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 CRACR2BQ8N4Y2 399 aaPredicted RBP11.16□□□□□ -0.62
MRPL48-204ENST00000411840 TMEM57Q8N5G2 664 aa11.16□□□□□ -0.62
MRPL48-204ENST00000411840 SSH3Q8TE77 659 aa11.16□□□□□ -0.62
MRPL48-204ENST00000411840 HMX1Q9NP08 348 aaPredicted RBP11.16□□□□□ -0.62
MRPL48-204ENST00000411840 TMOD4Q9NZQ9 345 aa11.16□□□□□ -0.62
MRPL48-204ENST00000411840 STAP2Q9UGK3 403 aa11.16□□□□□ -0.62
MRPL48-204ENST00000411840 PALD1Q9ULE6 856 aa11.16□□□□□ -0.62
MRPL48-204ENST00000411840 DOCK2Q92608 1830 aa11.16□□□□□ -0.62
MRPL48-204ENST00000411840 FLT1P17948 1338 aa11.15□□□□□ -0.62
MRPL48-204ENST00000411840 RPTORQ8N122 1335 aa11.15□□□□□ -0.62
MRPL48-204ENST00000411840 KIAA0100Q14667 2235 aaKnown RBP11.15□□□□□ -0.62
MRPL48-204ENST00000411840 C19orf81C9J6K1 198 aa11.15□□□□□ -0.62
MRPL48-204ENST00000411840 USP17L10C9JJH3 530 aa11.15□□□□□ -0.62
MRPL48-204ENST00000411840 PEX10O60683 326 aa11.15□□□□□ -0.62
MRPL48-204ENST00000411840 IGSF3O75054 1194 aa11.15□□□□□ -0.62
MRPL48-204ENST00000411840 SURF6O75683 361 aaKnown RBP11.15□□□□□ -0.62
MRPL48-204ENST00000411840 HOXA7P31268 230 aaPredicted RBP11.15□□□□□ -0.62
MRPL48-204ENST00000411840 ZAP70P43403 619 aa11.15□□□□□ -0.62
MRPL48-204ENST00000411840 IRX3P78415 501 aaPredicted RBP11.15□□□□□ -0.62
MRPL48-204ENST00000411840 SHROOM1Q2M3G4 852 aaPredicted RBP11.15□□□□□ -0.62
MRPL48-204ENST00000411840 ZKSCAN2Q63HK3 967 aa11.15□□□□□ -0.62
MRPL48-204ENST00000411840 ANKLE1Q8NAG6 615 aa11.15□□□□□ -0.62
MRPL48-204ENST00000411840 GPRC5AQ8NFJ5 357 aa11.15□□□□□ -0.62
MRPL48-204ENST00000411840 DIS3LQ8TF46 1054 aaKnown RBP11.15□□□□□ -0.62
MRPL48-204ENST00000411840 ZNF512BQ96KM6 892 aaPredicted RBP11.15□□□□□ -0.62
MRPL48-204ENST00000411840 TRIM34Q9BYJ4 488 aa11.15□□□□□ -0.62
MRPL48-204ENST00000411840 DNAJC18Q9H819 358 aa11.15□□□□□ -0.62
MRPL48-204ENST00000411840 PIH1D3Q9NQM4 214 aaKnown RBP11.15□□□□□ -0.62
MRPL48-204ENST00000411840 RBPJLQ9UBG7 517 aa11.15□□□□□ -0.62
MRPL48-204ENST00000411840 SAP30BPQ9UHR5 308 aaKnown RBP11.15□□□□□ -0.62
MRPL48-204ENST00000411840 A0A1W2PPC1 479 aa11.14□□□□□ -0.63
MRPL48-204ENST00000411840 GDF11O95390 407 aa11.14□□□□□ -0.63
MRPL48-204ENST00000411840 CYP2B6P20813 491 aa11.14□□□□□ -0.63
MRPL48-204ENST00000411840 HERVK_113P62684 666 aa11.14□□□□□ -0.63
MRPL48-204ENST00000411840 DYNLL1P63167 89 aaKnown RBP11.14□□□□□ -0.63
MRPL48-204ENST00000411840 TRIB2Q92519 343 aa11.14□□□□□ -0.63
MRPL48-204ENST00000411840 NBPF3Q9H094 633 aa11.14□□□□□ -0.63
MRPL48-204ENST00000411840 TXNRD2Q9NNW7 524 aa11.14□□□□□ -0.63
MRPL48-204ENST00000411840 GINM1Q9NU53 330 aa11.14□□□□□ -0.63
MRPL48-204ENST00000411840 MYH2Q9UKX2 1941 aa11.13□□□□□ -0.63
MRPL48-204ENST00000411840 DOCK1Q14185 1865 aa11.13□□□□□ -0.63
MRPL48-204ENST00000411840 HLA-DOAP06340 250 aa11.13□□□□□ -0.63
MRPL48-204ENST00000411840 XRCC5P13010 732 aaKnown RBP11.13□□□□□ -0.63
MRPL48-204ENST00000411840 CYP7A1P22680 504 aa11.13□□□□□ -0.63
MRPL48-204ENST00000411840 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
MRPL48-204ENST00000411840 Q3C1V9 767 aa11.13□□□□□ -0.63
MRPL48-204ENST00000411840 SPOCK2Q92563 424 aa11.13□□□□□ -0.63
MRPL48-204ENST00000411840 NUDT12Q9BQG2 462 aa11.13□□□□□ -0.63
MRPL48-204ENST00000411840 CCDC8Q9H0W5 538 aaPredicted RBP11.13□□□□□ -0.63
MRPL48-204ENST00000411840 C1orf115Q9H7X2 142 aa11.13□□□□□ -0.63
MRPL48-204ENST00000411840 EMILIN3Q9NT22 766 aa11.13□□□□□ -0.63
MRPL48-204ENST00000411840 DBNLQ9UJU6 430 aaKnown RBP11.13□□□□□ -0.63
MRPL48-204ENST00000411840 ZBTB21Q9ULJ3 1066 aa11.13□□□□□ -0.63
MRPL48-204ENST00000411840 NOP58Q9Y2X3 529 aaKnown RBP11.13□□□□□ -0.63
MRPL48-204ENST00000411840 AK9Q5TCS8 1911 aa11.12□□□□□ -0.63
MRPL48-204ENST00000411840 PRKAR2AP13861 404 aaKnown RBP11.12□□□□□ -0.63
MRPL48-204ENST00000411840 MAPK4P31152 587 aa11.12□□□□□ -0.63
MRPL48-204ENST00000411840 MAP3K21Q5TCX8 1036 aa11.12□□□□□ -0.63
MRPL48-204ENST00000411840 TATDN1Q6P1N9 297 aa11.12□□□□□ -0.63
MRPL48-204ENST00000411840 CCAR1Q8IX12 1150 aaKnown RBP11.12□□□□□ -0.63
MRPL48-204ENST00000411840 C7orf61Q8IZ16 206 aa11.12□□□□□ -0.63
MRPL48-204ENST00000411840 EAF2Q96CJ1 260 aaPredicted RBP11.12□□□□□ -0.63
MRPL48-204ENST00000411840 TLR7Q9NYK1 1049 aaKnown RBP11.12□□□□□ -0.63
MRPL48-204ENST00000411840 OGDHLQ9ULD0 1010 aa11.12□□□□□ -0.63
MRPL48-204ENST00000411840 PHIPQ8WWQ0 1821 aa11.12□□□□□ -0.63
MRPL48-204ENST00000411840 SOX1O00570 391 aaPredicted RBP11.11□□□□□ -0.63
MRPL48-204ENST00000411840 IDH1O75874 414 aaKnown RBP11.11□□□□□ -0.63
MRPL48-204ENST00000411840 GH2P01242 217 aa11.11□□□□□ -0.63
MRPL48-204ENST00000411840 BMP8BP34820 402 aa11.11□□□□□ -0.63
MRPL48-204ENST00000411840 ERVK-9P63128 1117 aa11.11□□□□□ -0.63
MRPL48-204ENST00000411840 ERVK-24P63145 666 aa11.11□□□□□ -0.63
MRPL48-204ENST00000411840 CACNB2Q08289 660 aaPredicted RBP11.11□□□□□ -0.63
MRPL48-204ENST00000411840 PDE3AQ14432 1141 aa11.11□□□□□ -0.63
MRPL48-204ENST00000411840 USP17L2Q6R6M4 530 aa11.11□□□□□ -0.63
MRPL48-204ENST00000411840 POTEEQ6S8J3 1075 aa11.11□□□□□ -0.63
MRPL48-204ENST00000411840 PLEKHH3Q7Z736 793 aa11.11□□□□□ -0.63
MRPL48-204ENST00000411840 TRMT44Q8IYL2 757 aaKnown RBP11.11□□□□□ -0.63
MRPL48-204ENST00000411840 MIGA1Q8NAN2 632 aa11.11□□□□□ -0.63
MRPL48-204ENST00000411840 SOCS4Q8WXH5 440 aa11.11□□□□□ -0.63
MRPL48-204ENST00000411840 USP6NLQ92738 828 aa11.11□□□□□ -0.63
MRPL48-204ENST00000411840 LRCH3Q96II8 777 aa11.11□□□□□ -0.63
MRPL48-204ENST00000411840 GDF15Q99988 308 aa11.11□□□□□ -0.63
MRPL48-204ENST00000411840 PORCNQ9H237 461 aa11.11□□□□□ -0.63
MRPL48-204ENST00000411840 C11orf49Q9H6J7 331 aa11.11□□□□□ -0.63
MRPL48-204ENST00000411840 ZMYND8Q9ULU4 1186 aaPredicted RBP11.11□□□□□ -0.63
MRPL48-204ENST00000411840 ZKSCAN1P17029 563 aaPredicted RBP11.1□□□□□ -0.63
MRPL48-204ENST00000411840 USP5P45974 858 aa11.1□□□□□ -0.63
MRPL48-204ENST00000411840 ZYXQ15942 572 aaKnown RBP11.1□□□□□ -0.63
MRPL48-204ENST00000411840 MORN1Q5T089 497 aa11.1□□□□□ -0.63
MRPL48-204ENST00000411840 GPR142Q7Z601 462 aa11.1□□□□□ -0.63
MRPL48-204ENST00000411840 CERS3Q8IU89 383 aa11.1□□□□□ -0.63
MRPL48-204ENST00000411840 FTSJ3Q8IY81 847 aaKnown RBP11.1□□□□□ -0.63
MRPL48-204ENST00000411840 MAGEB6Q8N7X4 407 aa11.1□□□□□ -0.63
MRPL48-204ENST00000411840 GTF3C2Q8WUA4 911 aaPredicted RBP11.1□□□□□ -0.63
MRPL48-204ENST00000411840 PAGR1Q9BTK6 254 aa11.1□□□□□ -0.63
MRPL48-204ENST00000411840 SERPINB13Q9UIV8 391 aa11.1□□□□□ -0.63
MRPL48-204ENST00000411840 NDUFB9Q9Y6M9 179 aa11.1□□□□□ -0.63
MRPL48-204ENST00000411840 LAMA3Q16787 3333 aa11.1□□□□□ -0.63
MRPL48-204ENST00000411840 CEP290O15078 2479 aa11.09□□□□□ -0.63
MRPL48-204ENST00000411840 MGAMO43451 1857 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms