RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 DBNDD2Q9BQY9 259 aa17.48■□□□□ 0.39
HLA-DQB2-229ENST00000411527 NBPF3Q9H094 633 aa17.48■□□□□ 0.39
HLA-DQB2-229ENST00000411527 DNAJC18Q9H819 358 aa17.48■□□□□ 0.39
HLA-DQB2-229ENST00000411527 GPR108Q9NPR9 543 aa17.48■□□□□ 0.39
HLA-DQB2-229ENST00000411527 PALD1Q9ULE6 856 aa17.48■□□□□ 0.39
HLA-DQB2-229ENST00000411527 FPGT-TNNI3KV9GXZ4 949 aa17.48■□□□□ 0.39
HLA-DQB2-229ENST00000411527 MAST2Q6P0Q8 1798 aa17.48■□□□□ 0.39
HLA-DQB2-229ENST00000411527 FOCADQ5VW36 1801 aa17.47■□□□□ 0.39
HLA-DQB2-229ENST00000411527 USP17L10C9JJH3 530 aa17.47■□□□□ 0.39
HLA-DQB2-229ENST00000411527 GDF11O95390 407 aa17.47■□□□□ 0.39
HLA-DQB2-229ENST00000411527 CYP2E1P05181 493 aaPredicted RBP17.47■□□□□ 0.39
HLA-DQB2-229ENST00000411527 HERVK_113P62684 666 aa17.47■□□□□ 0.39
HLA-DQB2-229ENST00000411527 OS9Q13438 667 aaPredicted RBP17.47■□□□□ 0.39
HLA-DQB2-229ENST00000411527 SHROOM1Q2M3G4 852 aaPredicted RBP17.47■□□□□ 0.39
HLA-DQB2-229ENST00000411527 GPRC5AQ8NFJ5 357 aa17.47■□□□□ 0.39
HLA-DQB2-229ENST00000411527 TRIB2Q92519 343 aa17.47■□□□□ 0.39
HLA-DQB2-229ENST00000411527 FLT1P17948 1338 aa17.47■□□□□ 0.39
HLA-DQB2-229ENST00000411527 METTL16Q86W50 562 aaKnown RBP17.46■□□□□ 0.39
HLA-DQB2-229ENST00000411527 LRCH3Q96II8 777 aa17.46■□□□□ 0.39
HLA-DQB2-229ENST00000411527 NUDT12Q9BQG2 462 aa17.46■□□□□ 0.39
HLA-DQB2-229ENST00000411527 TXNRD2Q9NNW7 524 aa17.46■□□□□ 0.39
HLA-DQB2-229ENST00000411527 SAP30BPQ9UHR5 308 aaKnown RBP17.46■□□□□ 0.39
HLA-DQB2-229ENST00000411527 ZMYND8Q9ULU4 1186 aaPredicted RBP17.46■□□□□ 0.39
HLA-DQB2-229ENST00000411527 DDX60LQ5H9U9 1706 aaKnown RBP17.46■□□□□ 0.39
HLA-DQB2-229ENST00000411527 ZAP70P43403 619 aa17.45■□□□□ 0.38
HLA-DQB2-229ENST00000411527 MNX1P50219 401 aaPredicted RBP17.45■□□□□ 0.38
HLA-DQB2-229ENST00000411527 POLA2Q14181 598 aa17.45■□□□□ 0.38
HLA-DQB2-229ENST00000411527 CCAR1Q8IX12 1150 aaKnown RBP17.45■□□□□ 0.38
HLA-DQB2-229ENST00000411527 TMEM57Q8N5G2 664 aa17.45■□□□□ 0.38
HLA-DQB2-229ENST00000411527 GDF15Q99988 308 aa17.45■□□□□ 0.38
HLA-DQB2-229ENST00000411527 C11orf49Q9H6J7 331 aa17.45■□□□□ 0.38
HLA-DQB2-229ENST00000411527 GINM1Q9NU53 330 aa17.45■□□□□ 0.38
HLA-DQB2-229ENST00000411527 RBPJLQ9UBG7 517 aa17.45■□□□□ 0.38
HLA-DQB2-229ENST00000411527 OGDHLQ9ULD0 1010 aa17.45■□□□□ 0.38
HLA-DQB2-229ENST00000411527 ZBTB21Q9ULJ3 1066 aa17.45■□□□□ 0.38
HLA-DQB2-229ENST00000411527 SURF6O75683 361 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB2-229ENST00000411527 HLA-DOAP06340 250 aa17.44■□□□□ 0.38
HLA-DQB2-229ENST00000411527 XRCC5P13010 732 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB2-229ENST00000411527 PRKAR2AP13861 404 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB2-229ENST00000411527 MAPK4P31152 587 aa17.44■□□□□ 0.38
HLA-DQB2-229ENST00000411527 BMP8BP34820 402 aa17.44■□□□□ 0.38
HLA-DQB2-229ENST00000411527 DYNLL1P63167 89 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB2-229ENST00000411527 ATP8B2P98198 1209 aa17.44■□□□□ 0.38
HLA-DQB2-229ENST00000411527 PDE3AQ14432 1141 aa17.44■□□□□ 0.38
HLA-DQB2-229ENST00000411527 Q3C1V9 767 aa17.44■□□□□ 0.38
HLA-DQB2-229ENST00000411527 MAP3K21Q5TCX8 1036 aa17.44■□□□□ 0.38
HLA-DQB2-229ENST00000411527 SSH3Q8TE77 659 aa17.44■□□□□ 0.38
HLA-DQB2-229ENST00000411527 SOCS4Q8WXH5 440 aa17.44■□□□□ 0.38
HLA-DQB2-229ENST00000411527 PIH1D3Q9NQM4 214 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB2-229ENST00000411527 MYH1P12882 1939 aa17.43■□□□□ 0.38
HLA-DQB2-229ENST00000411527 CCER2I3L3R5 266 aa17.43■□□□□ 0.38
HLA-DQB2-229ENST00000411527 SYN1P17600 705 aa17.43■□□□□ 0.38
HLA-DQB2-229ENST00000411527 CYP7A1P22680 504 aa17.43■□□□□ 0.38
HLA-DQB2-229ENST00000411527 ERVK-9P63128 1117 aa17.43■□□□□ 0.38
HLA-DQB2-229ENST00000411527 ERVK-24P63145 666 aa17.43■□□□□ 0.38
HLA-DQB2-229ENST00000411527 SLC17A8Q8NDX2 589 aa17.43■□□□□ 0.38
HLA-DQB2-229ENST00000411527 ZNF512BQ96KM6 892 aaPredicted RBP17.43■□□□□ 0.38
HLA-DQB2-229ENST00000411527 PAGR1Q9BTK6 254 aa17.43■□□□□ 0.38
HLA-DQB2-229ENST00000411527 PORCNQ9H237 461 aa17.43■□□□□ 0.38
HLA-DQB2-229ENST00000411527 EMILIN3Q9NT22 766 aa17.43■□□□□ 0.38
HLA-DQB2-229ENST00000411527 IGSF3O75054 1194 aa17.42■□□□□ 0.38
HLA-DQB2-229ENST00000411527 ZKSCAN1P17029 563 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB2-229ENST00000411527 CACNB2Q08289 660 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB2-229ENST00000411527 ZKSCAN2Q63HK3 967 aa17.42■□□□□ 0.38
HLA-DQB2-229ENST00000411527 USP17L2Q6R6M4 530 aa17.42■□□□□ 0.38
HLA-DQB2-229ENST00000411527 TRMT44Q8IYL2 757 aaKnown RBP17.42■□□□□ 0.38
HLA-DQB2-229ENST00000411527 GH2P01242 217 aa17.41■□□□□ 0.38
HLA-DQB2-229ENST00000411527 POTEEQ6S8J3 1075 aa17.41■□□□□ 0.38
HLA-DQB2-229ENST00000411527 GPR142Q7Z601 462 aa17.41■□□□□ 0.38
HLA-DQB2-229ENST00000411527 PLEKHH3Q7Z736 793 aa17.41■□□□□ 0.38
HLA-DQB2-229ENST00000411527 GTF3C2Q8WUA4 911 aaPredicted RBP17.41■□□□□ 0.38
HLA-DQB2-229ENST00000411527 USP6NLQ92738 828 aa17.41■□□□□ 0.38
HLA-DQB2-229ENST00000411527 CCDC8Q9H0W5 538 aaPredicted RBP17.41■□□□□ 0.38
HLA-DQB2-229ENST00000411527 C1orf115Q9H7X2 142 aa17.41■□□□□ 0.38
HLA-DQB2-229ENST00000411527 DBNLQ9UJU6 430 aaKnown RBP17.41■□□□□ 0.38
HLA-DQB2-229ENST00000411527 IDH1O75874 414 aaKnown RBP17.4■□□□□ 0.38
HLA-DQB2-229ENST00000411527 RGS2P41220 211 aa17.4■□□□□ 0.38
HLA-DQB2-229ENST00000411527 MAGEA10P43363 369 aaPredicted RBP17.4■□□□□ 0.38
HLA-DQB2-229ENST00000411527 ZYXQ15942 572 aaKnown RBP17.4■□□□□ 0.38
HLA-DQB2-229ENST00000411527 CCL14Q16627 93 aa17.4■□□□□ 0.38
HLA-DQB2-229ENST00000411527 MORN1Q5T089 497 aa17.4■□□□□ 0.38
HLA-DQB2-229ENST00000411527 MIGA1Q8NAN2 632 aa17.4■□□□□ 0.38
HLA-DQB2-229ENST00000411527 CWC22Q9HCG8 908 aaKnown RBP17.4■□□□□ 0.38
HLA-DQB2-229ENST00000411527 TLR7Q9NYK1 1049 aaKnown RBP17.4■□□□□ 0.38
HLA-DQB2-229ENST00000411527 PFASO15067 1338 aa17.4■□□□□ 0.38
HLA-DQB2-229ENST00000411527 CCND3P30281 292 aaPredicted RBP17.39■□□□□ 0.37
HLA-DQB2-229ENST00000411527 USP5P45974 858 aa17.39■□□□□ 0.37
HLA-DQB2-229ENST00000411527 EAF2Q96CJ1 260 aaPredicted RBP17.39■□□□□ 0.37
HLA-DQB2-229ENST00000411527 FEZ1Q99689 392 aa17.39■□□□□ 0.37
HLA-DQB2-229ENST00000411527 NOP58Q9Y2X3 529 aaKnown RBP17.39■□□□□ 0.37
HLA-DQB2-229ENST00000411527 USP17L15C9J2P7 530 aa17.38■□□□□ 0.37
HLA-DQB2-229ENST00000411527 USP17L13C9JLJ4 530 aa17.38■□□□□ 0.37
HLA-DQB2-229ENST00000411527 USP17L11C9JVI0 530 aa17.38■□□□□ 0.37
HLA-DQB2-229ENST00000411527 USP17L18D6R9N7 530 aa17.38■□□□□ 0.37
HLA-DQB2-229ENST00000411527 USP17L22D6RA61 530 aa17.38■□□□□ 0.37
HLA-DQB2-229ENST00000411527 USP17L17D6RBQ6 530 aa17.38■□□□□ 0.37
HLA-DQB2-229ENST00000411527 USP17L19D6RCP7 530 aa17.38■□□□□ 0.37
HLA-DQB2-229ENST00000411527 USP17L20D6RJB6 530 aa17.38■□□□□ 0.37
HLA-DQB2-229ENST00000411527 USP17L24Q0WX57 530 aa17.38■□□□□ 0.37
HLA-DQB2-229ENST00000411527 RAB3GAP1Q15042 981 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms