RNA–Protein interactions for RNA: ENST00000411293.1

RNU6-1054P-201, Transcript of RNA, U6 small nuclear 1054, pseudogene, humanhuman

BASIC

Gene RNU6-1054P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1054P-201ENST00000411293 LARP1BQ659C4 914 aaKnown RBP1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 LLGL2Q6P1M3 1020 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 LILRA6Q6PI73 481 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 FAM196AQ6ZSG2 479 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 PPP1R3FQ6ZSY5 799 aaPredicted RBP1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 BEND4Q6ZU67 534 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 ACAD11Q709F0 780 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 PDZD3Q86UT5 571 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 SIAH1Q8IUQ4 282 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 FAM20CQ8IXL6 584 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 AGGF1Q8N302 714 aaeCLIP1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 CELF2-AS1Q8N7Q2 184 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 KLHL23Q8NBE8 558 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 UBASH3BQ8TF42 649 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 XAGE3Q8WTP9 111 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 TMEM40Q8WWA1 233 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 GATAD2BQ8WXI9 593 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 PLPPR2Q96GM1 343 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 RHOVQ96L33 236 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 SRPK1Q96SB4 655 aaKnown RBP1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 GMLQ99445 158 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 CORO1BQ9BR76 489 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 NT5C1AQ9BXI3 368 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 SRRTQ9BXP5 876 aaKnown RBP1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 OSBPL1AQ9BXW6 950 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 KCNF1Q9H3M0 494 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 KANSL2Q9H9L4 492 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 PICK1Q9NRD5 415 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 BSDC1Q9NW68 430 aaPredicted RBP1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 KLHL3Q9UH77 587 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 CYP8B1Q9UNU6 501 aa1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 POLR3KQ9Y2Y1 108 aaPredicted RBP1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 R3HCC1Q9Y3T6 440 aaKnown RBP1.85□□□□□ -2.11
RNU6-1054P-201ENST00000411293 B2RBV5 119 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 H3BRJ5 948 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 DNAJA2O60884 412 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 ADAM11O75078 769 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 CILPO75339 1184 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 DDAH1O94760 285 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 WISP1O95388 367 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 BPNT1O95861 308 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 B3GALT4O96024 378 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 TP53P04637 393 aaPredicted RBP1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 RLBP1P12271 317 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 BMP3P12645 472 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 HOXD8P13378 290 aaPredicted RBP1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 HCLS1P14317 486 aaPredicted RBP1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 PLCG1P19174 1290 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 POLR2BP30876 1174 aaKnown RBP1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 EIF6P56537 245 aaKnown RBP1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 CHMP4BP1P59074 171 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 ETF1P62495 437 aaKnown RBP1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 ZNF252P-AS1Q0IIN9 211 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 LRRC14Q15048 493 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 ZYXQ15942 572 aaKnown RBP1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 DUOXA2Q1HG44 320 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 CWF19L2Q2TBE0 894 aaKnown RBP1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 WIPI1Q5MNZ9 446 aaPredicted RBP1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 LRFN4Q6PJG9 635 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 DYMQ7RTS9 669 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 UBE3DQ7Z6J8 389 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 ATG4DQ86TL0 474 aaPredicted RBP1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 SLITRK4Q8IW52 837 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 CKAP2LQ8IYA6 745 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 STK11IPQ8N1F8 1099 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 C12orf50Q8NA57 414 aaPredicted RBP1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 FLCNQ8NFG4 579 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 ANKRD24Q8TF21 1146 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 ELMO3Q96BJ8 720 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 SHDQ96IW2 340 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 SEC16BQ96JE7 1060 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 FAM84AQ96KN4 292 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 DNAJC7Q99615 494 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 DPH2Q9BQC3 489 aaPredicted RBP1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 LGR4Q9BXB1 951 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 TRIM55Q9BYV6 548 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 ZFYVE1Q9HBF4 777 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 SSU72Q9NP77 194 aaKnown RBP1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 PFDN2Q9UHV9 154 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 PPP1R9AQ9ULJ8 1098 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 PPM1HQ9ULR3 514 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 WDR3Q9UNX4 943 aaKnown RBP eCLIP1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 CDK11AQ9UQ88 783 aaPredicted RBP1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 SAMM50Q9Y512 469 aa1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 MRPL42Q9Y6G3 142 aaKnown RBP1.84□□□□□ -2.11
RNU6-1054P-201ENST00000411293 CADPSQ9ULU8 1353 aa1.84□□□□□ -2.12
RNU6-1054P-201ENST00000411293 SBNO2Q9Y2G9 1366 aa1.84□□□□□ -2.12
RNU6-1054P-201ENST00000411293 LOC100289279A0A1B0GTE1 492 aa1.83□□□□□ -2.12
RNU6-1054P-201ENST00000411293 TLDC2A0PJX2 215 aa1.83□□□□□ -2.12
RNU6-1054P-201ENST00000411293 SLC22A31A6NKX4 558 aa1.83□□□□□ -2.12
RNU6-1054P-201ENST00000411293 GFRA2O00451 464 aa1.83□□□□□ -2.12
RNU6-1054P-201ENST00000411293 U2SURPO15042 1029 aaKnown RBP1.83□□□□□ -2.12
RNU6-1054P-201ENST00000411293 PPM1GO15355 546 aaPredicted RBP1.83□□□□□ -2.12
RNU6-1054P-201ENST00000411293 KLF4O43474 513 aa1.83□□□□□ -2.12
RNU6-1054P-201ENST00000411293 GAS2O43903 313 aaKnown RBP1.83□□□□□ -2.12
RNU6-1054P-201ENST00000411293 AOC2O75106 756 aa1.83□□□□□ -2.12
RNU6-1054P-201ENST00000411293 PAPLNO95428 1278 aa1.83□□□□□ -2.12
RNU6-1054P-201ENST00000411293 CYP11A1P05108 521 aa1.83□□□□□ -2.12
RNU6-1054P-201ENST00000411293 PGRP06401 933 aa1.83□□□□□ -2.12
RNU6-1054P-201ENST00000411293 GRK4P32298 578 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms