RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 ESR1P03372 595 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 GLI1P08151 1106 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 USP17L7P0C7H9 530 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 GRK4P32298 578 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 RAP1GAPP47736 663 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 FMR1Q06787 632 aaKnown RBP eCLIP3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 TNK2Q07912 1038 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 SEPT6Q14141 434 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 MAP3K11Q16584 847 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 WIPI1Q5MNZ9 446 aaPredicted RBP3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 PRAMEF13Q5VWM6 474 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 B4GALNT3Q6L9W6 998 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 ZNF507Q8TCN5 953 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 ELMO3Q96BJ8 720 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 KIRREL1Q96J84 757 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 Q96M66 194 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 WNT10AQ9GZT5 417 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 ADAMTS10Q9H324 1103 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 LMCD1Q9NZU5 365 aa3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 TPX2Q9ULW0 747 aaKnown RBP3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 GNEQ9Y223 722 aaKnown RBP3.17□□□□□ -1.9
RNU2-55P-201ENST00000411146 UPK3BL1B0FP48 263 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 FAM155AB1AL88 458 aaPredicted RBP3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 UPK3BL2E5RIL1 263 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 NPIPB6E9PJ23 425 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 F6X3S4 739 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 TSPAN15O95858 294 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 P4HBP07237 508 aaKnown RBP3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 GSTT1P30711 240 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 GDNFP39905 211 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 AFMP43652 599 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 GALK1P51570 392 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 CLCN7P51798 805 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 HK2P52789 917 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 TIGD5Q53EQ6 642 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 TMEM67Q5HYA8 995 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 SFRP5Q5T4F7 317 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 LETMD1Q6P1Q0 360 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 MPZL3Q6UWV2 235 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 LRRC56Q8IYG6 542 aaPredicted RBP3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 MFSD4AQ8N468 514 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 KRTAP9-3Q9BYQ3 159 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 DUSP15Q9H1R2 295 aaPredicted RBP3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 NSUN3Q9H649 340 aaKnown RBP3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 C19orf44Q9H6X5 657 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 FAM53CQ9NYF3 392 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 SLAMF8Q9P0V8 285 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 TJP2Q9UDY2 1190 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 EBF1Q9UH73 591 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 CYP8B1Q9UNU6 501 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 CORINQ9Y5Q5 1042 aa3.16□□□□□ -1.9
RNU2-55P-201ENST00000411146 ETV2O00321 342 aaPredicted RBP3.15□□□□□ -1.91
RNU2-55P-201ENST00000411146 EFEMP2O95967 443 aa3.15□□□□□ -1.91
RNU2-55P-201ENST00000411146 CST3P01034 146 aaPredicted RBP3.15□□□□□ -1.91
RNU2-55P-201ENST00000411146 ZSCAN22P10073 491 aaPredicted RBP3.15□□□□□ -1.91
RNU2-55P-201ENST00000411146 ETF1P62495 437 aaKnown RBP3.15□□□□□ -1.91
RNU2-55P-201ENST00000411146 LRRC14Q15048 493 aa3.15□□□□□ -1.91
RNU2-55P-201ENST00000411146 TTC6Q86TZ1 520 aa3.15□□□□□ -1.91
RNU2-55P-201ENST00000411146 SIAH1Q8IUQ4 282 aa3.15□□□□□ -1.91
RNU2-55P-201ENST00000411146 PPP1R13LQ8WUF5 828 aa3.15□□□□□ -1.91
RNU2-55P-201ENST00000411146 CEP44Q9C0F1 390 aa3.15□□□□□ -1.91
RNU2-55P-201ENST00000411146 C12orf49Q9H741 205 aa3.15□□□□□ -1.91
RNU2-55P-201ENST00000411146 MAPK8IP1Q9UQF2 711 aa3.15□□□□□ -1.91
RNU2-55P-201ENST00000411146 TFE3P19532 575 aaPredicted RBP3.14□□□□□ -1.91
RNU2-55P-201ENST00000411146 MEI1Q5TIA1 1274 aa3.14□□□□□ -1.91
RNU2-55P-201ENST00000411146 TTBK2Q6IQ55 1244 aa3.14□□□□□ -1.91
RNU2-55P-201ENST00000411146 LILRA6Q6PI73 481 aa3.14□□□□□ -1.91
RNU2-55P-201ENST00000411146 ATG14Q6ZNE5 492 aa3.14□□□□□ -1.91
RNU2-55P-201ENST00000411146 HDXQ7Z353 690 aa3.14□□□□□ -1.91
RNU2-55P-201ENST00000411146 NPAS4Q8IUM7 802 aa3.14□□□□□ -1.91
RNU2-55P-201ENST00000411146 HID1Q8IV36 788 aa3.14□□□□□ -1.91
RNU2-55P-201ENST00000411146 DNAJB8Q8NHS0 232 aa3.14□□□□□ -1.91
RNU2-55P-201ENST00000411146 C20orf173Q96LM9 149 aa3.14□□□□□ -1.91
RNU2-55P-201ENST00000411146 TOX2Q96NM4 488 aa3.14□□□□□ -1.91
RNU2-55P-201ENST00000411146 ALPK1Q96QP1 1244 aa3.14□□□□□ -1.91
RNU2-55P-201ENST00000411146 TLR6Q9Y2C9 796 aa3.14□□□□□ -1.91
RNU2-55P-201ENST00000411146 IVNS1ABPQ9Y6Y0 642 aa3.14□□□□□ -1.91
RNU2-55P-201ENST00000411146 LDHBP07195 334 aaKnown RBP3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 CAP2P40123 477 aa3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 BUD31P41223 144 aaPredicted RBP3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 C22orf34Q6ZV56 151 aa3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 TTLL10Q6ZVT0 673 aa3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 ANKLE2Q86XL3 938 aa3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 CREG2Q8IUH2 290 aa3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 MFSD2AQ8NA29 543 aa3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 KCT2Q8NC54 265 aa3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 ABHD4Q8TB40 342 aa3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 JARID2Q92833 1246 aaPredicted RBP3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 ACSF2Q96CM8 615 aaPredicted RBP3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 ASB16Q96NS5 453 aa3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 PPP1R16BQ96T49 567 aa3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 SGPP1Q9BX95 441 aa3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 RNF32Q9H0A6 362 aa3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 PPM1HQ9ULR3 514 aa3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 TTF2Q9UNY4 1162 aaKnown RBP3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 SMG5Q9UPR3 1016 aaKnown RBP3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 SAMM50Q9Y512 469 aa3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 SNCAIPQ9Y6H5 919 aa3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 NCANO14594 1321 aa3.13□□□□□ -1.91
RNU2-55P-201ENST00000411146 MYOCOSA0A1B0GUC4 107 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms