RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 BTDP43251 543 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 PPM1FP49593 454 aaPredicted RBP10.18□□□□□ -0.78
PBRM1-208ENST00000410007 ZNF354CQ86Y25 554 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 SMCR8Q8TEV9 937 aaPredicted RBP10.18□□□□□ -0.78
PBRM1-208ENST00000410007 ATG3Q9NT62 314 aa10.18□□□□□ -0.78
PBRM1-208ENST00000410007 HSF2BPO75031 334 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 BMS1Q14692 1282 aaKnown RBP10.17□□□□□ -0.78
PBRM1-208ENST00000410007 DOK7Q18PE1 504 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 CTNND2Q9UQB3 1225 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 ZKSCAN5Q9Y2L8 839 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 KIF1BO60333 1816 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 TSPOAP1O95153 1857 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 SMCO2A6NFE2 343 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 AKR1B15C9JRZ8 316 aaPredicted RBP10.17□□□□□ -0.78
PBRM1-208ENST00000410007 HARSP12081 509 aaKnown RBP10.17□□□□□ -0.78
PBRM1-208ENST00000410007 TAF12Q16514 161 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 HERC4Q5GLZ8 1057 aaPredicted RBP10.17□□□□□ -0.78
PBRM1-208ENST00000410007 MICALCLQ6ZW33 695 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 NLRX1Q86UT6 975 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 CSGALNACT2Q8N6G5 542 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 ZNF830Q96NB3 372 aaPredicted RBP10.17□□□□□ -0.78
PBRM1-208ENST00000410007 NT5C3AQ9H0P0 336 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 KCNJ14Q9UNX9 436 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 HEG1Q9ULI3 1381 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 CDK12Q9NYV4 1490 aaPredicted RBP10.17□□□□□ -0.78
PBRM1-208ENST00000410007 PPEF1O14829 653 aaPredicted RBP10.17□□□□□ -0.78
PBRM1-208ENST00000410007 SLC8A3P57103 927 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 PABPC4Q13310 644 aaKnown RBP eCLIP10.17□□□□□ -0.78
PBRM1-208ENST00000410007 HS1BP3Q53T59 392 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 KIFC2Q96AC6 838 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 SLC5A4Q9NY91 659 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 VPS54Q9P1Q0 977 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 ATP6V0A2Q9Y487 856 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 ATP10DQ9P241 1426 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 ARAP3Q8WWN8 1544 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 STX10O60499 249 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 GJC1P36383 396 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 PHKA1P46020 1223 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 DNM2P50570 870 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 PLCB3Q01970 1234 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 CERKLQ49MI3 558 aaPredicted RBP10.17□□□□□ -0.78
PBRM1-208ENST00000410007 SPATA31A3Q5VYP0 1347 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 BRINP3Q76B58 766 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 PNMA1Q8ND90 353 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 STAP2Q9UGK3 403 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 SSX2IPQ9Y2D8 614 aa10.17□□□□□ -0.78
PBRM1-208ENST00000410007 MAP3K4Q9Y6R4 1608 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 ZNF202O95125 648 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 PAK1Q13153 545 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 GNPTABQ3T906 1256 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 EAPPQ56P03 285 aaPredicted RBP10.16□□□□□ -0.78
PBRM1-208ENST00000410007 FAM173BQ6P4H8 233 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 BEGAINQ9BUH8 593 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 TSGA10Q9BZW7 698 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 GUCA1BQ9UMX6 200 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 TNKSO95271 1327 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 JAK2O60674 1132 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 CABP7Q86V35 215 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 FANCBQ8NB91 859 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 SDR42E1Q8WUS8 393 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 CCDC17Q96LX7 622 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 FGAP02671 866 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 GSPT1P15170 499 aaKnown RBP10.16□□□□□ -0.78
PBRM1-208ENST00000410007 SCNN1DP51172 638 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 TRPC3Q13507 836 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 GALNT17Q6IS24 598 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 CCDC50Q8IVM0 306 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 TRMT2AQ8IZ69 625 aaKnown RBP10.16□□□□□ -0.78
PBRM1-208ENST00000410007 SREK1Q8WXA9 508 aaKnown RBP10.16□□□□□ -0.78
PBRM1-208ENST00000410007 MRPL11Q9Y3B7 192 aaKnown RBP10.16□□□□□ -0.78
PBRM1-208ENST00000410007 TMEM110-MUSTN1A8MSY1 372 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 ICA1Q05084 483 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 ARHGAP27Q6ZUM4 889 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 GSTA5Q7RTV2 222 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 ARFGAP3Q9NP61 516 aa10.16□□□□□ -0.78
PBRM1-208ENST00000410007 SYNRGQ9UMZ2 1314 aa10.15□□□□□ -0.78
PBRM1-208ENST00000410007 DDAH1O94760 285 aa10.15□□□□□ -0.78
PBRM1-208ENST00000410007 ZNF853P0CG23 659 aa10.15□□□□□ -0.78
PBRM1-208ENST00000410007 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.15□□□□□ -0.78
PBRM1-208ENST00000410007 SULF1Q8IWU6 871 aa10.15□□□□□ -0.78
PBRM1-208ENST00000410007 INCENPQ9NQS7 918 aa10.15□□□□□ -0.78
PBRM1-208ENST00000410007 RNF216Q9NWF9 866 aaPredicted RBP10.15□□□□□ -0.78
PBRM1-208ENST00000410007 KDM3AQ9Y4C1 1321 aa10.15□□□□□ -0.78
PBRM1-208ENST00000410007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.15□□□□□ -0.78
PBRM1-208ENST00000410007 DDX39AO00148 427 aaKnown RBP10.15□□□□□ -0.78
PBRM1-208ENST00000410007 PTH1RQ03431 593 aa10.15□□□□□ -0.78
PBRM1-208ENST00000410007 MYSM1Q5VVJ2 828 aa10.15□□□□□ -0.78
PBRM1-208ENST00000410007 NLRP10Q86W26 655 aa10.15□□□□□ -0.78
PBRM1-208ENST00000410007 BAG1Q99933 345 aaPredicted RBP10.15□□□□□ -0.78
PBRM1-208ENST00000410007 PUS3Q9BZE2 481 aaKnown RBP10.15□□□□□ -0.78
PBRM1-208ENST00000410007 DBNLQ9UJU6 430 aaKnown RBP10.15□□□□□ -0.78
PBRM1-208ENST00000410007 MTUS1Q9ULD2 1270 aa10.15□□□□□ -0.78
PBRM1-208ENST00000410007 TET3O43151 1660 aa10.15□□□□□ -0.78
PBRM1-208ENST00000410007 TCP10L2B9ZVM9 353 aa10.15□□□□□ -0.78
PBRM1-208ENST00000410007 POLR3GO15318 223 aaPredicted RBP10.15□□□□□ -0.78
PBRM1-208ENST00000410007 PFKFB2O60825 505 aa10.15□□□□□ -0.78
PBRM1-208ENST00000410007 ME3Q16798 604 aa10.15□□□□□ -0.78
PBRM1-208ENST00000410007 CDC37L1Q7L3B6 337 aa10.15□□□□□ -0.78
PBRM1-208ENST00000410007 BLIDQ8IZY5 108 aa10.15□□□□□ -0.78
PBRM1-208ENST00000410007 IGSF22Q8N9C0 903 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms