RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 SERPINB10P48595 397 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 TAF11Q15544 211 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 SAMD1Q6SPF0 538 aaPredicted RBP14.25□□□□□ -0.13
COL6A3-206ENST00000409809 TEX9Q8N6V9 391 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 ANKRD2Q9GZV1 360 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 DCTN3O75935 186 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 C20orf194Q5TEA3 1177 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 FNBP4Q8N3X1 1017 aaPredicted RBP14.24□□□□□ -0.13
COL6A3-206ENST00000409809 CRACR2BQ8N4Y2 399 aaPredicted RBP14.24□□□□□ -0.13
COL6A3-206ENST00000409809 ZGPATQ8N5A5 531 aaKnown RBP14.24□□□□□ -0.13
COL6A3-206ENST00000409809 FAM69CQ0P6D2 419 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 ASIC3Q9UHC3 531 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 RTEL1-TNFRSF6BF6WH68 1400 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 GSTO1P78417 241 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 PACSIN2Q9UNF0 486 aaPredicted RBP14.24□□□□□ -0.13
COL6A3-206ENST00000409809 COPG1Q9Y678 874 aaKnown RBP14.24□□□□□ -0.13
COL6A3-206ENST00000409809 RANBP6O60518 1105 aaKnown RBP14.24□□□□□ -0.13
COL6A3-206ENST00000409809 SERPINB6P35237 376 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 PEX26Q7Z412 305 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 IWS1Q96ST2 819 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 BAG5Q9UL15 447 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 NAIPQ13075 1403 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 STARD3NLO95772 234 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 CCT5P48643 541 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 SESN3P58005 492 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 GUCY1B3Q02153 619 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 NOC4LQ9BVI4 516 aaKnown RBP14.24□□□□□ -0.13
COL6A3-206ENST00000409809 PDE11AQ9HCR9 933 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 NUB1Q9Y5A7 615 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 SYF2O95926 243 aaKnown RBP14.24□□□□□ -0.13
COL6A3-206ENST00000409809 C16orf87Q6PH81 154 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 LRRC8AQ8IWT6 810 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 LRRC43Q8N309 656 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 CFAP61Q8NHU2 1237 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 MORC4Q8TE76 937 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 RASSF10A6NK89 507 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 SART1O43290 800 aaKnown RBP14.24□□□□□ -0.13
COL6A3-206ENST00000409809 THAP12O43422 761 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 BCRP11274 1271 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 TBC1D8BQ0IIM8 1120 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 PAK1Q13153 545 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 DTHD1Q6ZMT9 781 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 NESP48681 1621 aa14.24□□□□□ -0.13
COL6A3-206ENST00000409809 MAP7D3Q8IWC1 876 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 ZNF215Q9UL58 517 aaPredicted RBP14.23□□□□□ -0.13
COL6A3-206ENST00000409809 PCF11O94913 1555 aaKnown RBP14.23□□□□□ -0.13
COL6A3-206ENST00000409809 DIXDC1Q155Q3 683 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 EMBQ6PCB8 327 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 ANKRD44Q8N8A2 993 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 FBXO18Q8NFZ0 1043 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 BZW2Q9Y6E2 419 aaKnown RBP14.23□□□□□ -0.13
COL6A3-206ENST00000409809 UQCRFS1P1P0C7P4 283 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 CABP4P57796 275 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 KRT79Q5XKE5 535 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 CALUO43852 315 aaPredicted RBP14.23□□□□□ -0.13
COL6A3-206ENST00000409809 OCA2Q04671 838 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 IFT88Q13099 833 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 NBPF5PQ86XG9 351 aaPredicted RBP14.23□□□□□ -0.13
COL6A3-206ENST00000409809 CALR3Q96L12 384 aaKnown RBP14.23□□□□□ -0.13
COL6A3-206ENST00000409809 C6orf50Q9HD87 102 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 CHGBP05060 677 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 EEF1DP29692 281 aaKnown RBP14.23□□□□□ -0.13
COL6A3-206ENST00000409809 CAPRIN2Q6IMN6 1127 aaKnown RBP14.23□□□□□ -0.13
COL6A3-206ENST00000409809 LZICQ8WZA0 190 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 MSH6P52701 1360 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 CBX8Q9HC52 389 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 DIABLOQ9NR28 239 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 AGTPBP1Q9UPW5 1226 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 MRFAP1Q9Y605 127 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 KLF18A0A0U1RQI7 1052 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 FAM13AO94988 1023 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 CFAP43Q8NDM7 1665 aa14.23□□□□□ -0.13
COL6A3-206ENST00000409809 ASIC2Q16515 512 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 CATSPER1Q8NEC5 780 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 MAML3Q96JK9 1138 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 RIC8AQ9NPQ8 531 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 CUL1Q13616 776 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 ABTB2Q8N961 1025 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 LDHCP07864 332 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 TMTC3Q6ZXV5 915 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 LRRC8CQ8TDW0 803 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 A0A1B0GVL5 298 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 MCM7P33993 719 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 DHX32Q7L7V1 743 aaKnown RBP14.22□□□□□ -0.13
COL6A3-206ENST00000409809 ABTB1Q969K4 478 aaPredicted RBP14.22□□□□□ -0.13
COL6A3-206ENST00000409809 PIK3C2GO75747 1445 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 MINDY4BA8MYZ0 360 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 BIRC3Q13489 604 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 TRIM15Q9C019 465 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 PASKQ96RG2 1323 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 STRN3Q13033 797 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 FAM96AQ9H5X1 160 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 GIMAP4Q9NUV9 329 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 KCNG1Q9UIX4 513 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 OSBPL9Q96SU4 736 aa14.22□□□□□ -0.13
COL6A3-206ENST00000409809 OGFOD1Q8N543 542 aa14.21□□□□□ -0.13
COL6A3-206ENST00000409809 NR1H3Q13133 447 aa14.21□□□□□ -0.13
COL6A3-206ENST00000409809 PPP1R2P3Q6NXS1 205 aa14.21□□□□□ -0.13
COL6A3-206ENST00000409809 TCP11Q8WWU5 503 aa14.21□□□□□ -0.13
COL6A3-206ENST00000409809 IFIT1BQ5T764 474 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms