RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 Q3C1V9 767 aa15.55■□□□□ 0.08
CHRNA1-205ENST00000409542 TEX11Q8IYF3 940 aa15.55■□□□□ 0.08
CHRNA1-205ENST00000409542 DNAJC18Q9H819 358 aa15.55■□□□□ 0.08
CHRNA1-205ENST00000409542 RAI14Q9P0K7 980 aa15.55■□□□□ 0.08
CHRNA1-205ENST00000409542 AKAP2Q9Y2D5 859 aa15.55■□□□□ 0.08
CHRNA1-205ENST00000409542 COL2A1P02458 1487 aaPredicted RBP15.55■□□□□ 0.08
CHRNA1-205ENST00000409542 LAMA2P24043 3122 aaKnown RBP15.54■□□□□ 0.08
CHRNA1-205ENST00000409542 SRGAP3O43295 1099 aa15.54■□□□□ 0.08
CHRNA1-205ENST00000409542 LDHCP07864 332 aa15.54■□□□□ 0.08
CHRNA1-205ENST00000409542 PRKAR2AP13861 404 aaKnown RBP15.54■□□□□ 0.08
CHRNA1-205ENST00000409542 MCAMP43121 646 aa15.54■□□□□ 0.08
CHRNA1-205ENST00000409542 PABPC4Q13310 644 aaKnown RBP eCLIP15.54■□□□□ 0.08
CHRNA1-205ENST00000409542 TBC1D2Q9BYX2 928 aa15.54■□□□□ 0.08
CHRNA1-205ENST00000409542 API5Q9BZZ5 524 aaKnown RBP15.54■□□□□ 0.08
CHRNA1-205ENST00000409542 UNC80Q8N2C7 3258 aa15.53■□□□□ 0.08
CHRNA1-205ENST00000409542 ARID4AP29374 1257 aaPredicted RBP15.53■□□□□ 0.08
CHRNA1-205ENST00000409542 BACE1P56817 501 aa15.53■□□□□ 0.08
CHRNA1-205ENST00000409542 GSTO1P78417 241 aa15.53■□□□□ 0.08
CHRNA1-205ENST00000409542 CACNB2Q08289 660 aaPredicted RBP15.53■□□□□ 0.08
CHRNA1-205ENST00000409542 CCL14Q16627 93 aa15.53■□□□□ 0.08
CHRNA1-205ENST00000409542 LRIT3Q3SXY7 679 aa15.53■□□□□ 0.08
CHRNA1-205ENST00000409542 WDR18Q9BV38 432 aa15.53■□□□□ 0.08
CHRNA1-205ENST00000409542 RBPJLQ9UBG7 517 aa15.53■□□□□ 0.08
CHRNA1-205ENST00000409542 MAP4K4O95819 1239 aaPredicted RBP15.52■□□□□ 0.08
CHRNA1-205ENST00000409542 COL6A1P12109 1028 aa15.52■□□□□ 0.08
CHRNA1-205ENST00000409542 CCND3P30281 292 aaPredicted RBP15.52■□□□□ 0.08
CHRNA1-205ENST00000409542 HOXA7P31268 230 aaPredicted RBP15.52■□□□□ 0.08
CHRNA1-205ENST00000409542 HERVK_113P62684 666 aa15.52■□□□□ 0.08
CHRNA1-205ENST00000409542 MTX1Q13505 466 aa15.52■□□□□ 0.08
CHRNA1-205ENST00000409542 GPR153Q6NV75 609 aa15.52■□□□□ 0.08
CHRNA1-205ENST00000409542 ADGRA1Q86SQ6 560 aa15.52■□□□□ 0.08
CHRNA1-205ENST00000409542 TDHQ8IZJ6 230 aa15.52■□□□□ 0.08
CHRNA1-205ENST00000409542 USP6NLQ92738 828 aa15.52■□□□□ 0.08
CHRNA1-205ENST00000409542 PORCNQ9H237 461 aa15.52■□□□□ 0.08
CHRNA1-205ENST00000409542 AS3MTQ9HBK9 375 aa15.52■□□□□ 0.08
CHRNA1-205ENST00000409542 MTMR10Q9NXD2 777 aa15.52■□□□□ 0.08
CHRNA1-205ENST00000409542 AATFQ9NY61 560 aaKnown RBP eCLIP15.52■□□□□ 0.08
CHRNA1-205ENST00000409542 HERC5Q9UII4 1024 aaKnown RBP15.52■□□□□ 0.08
CHRNA1-205ENST00000409542 TNNQ9UQP3 1299 aa15.52■□□□□ 0.08
CHRNA1-205ENST00000409542 GDF11O95390 407 aa15.52■□□□□ 0.07
CHRNA1-205ENST00000409542 IRX3P78415 501 aaPredicted RBP15.52■□□□□ 0.07
CHRNA1-205ENST00000409542 LRRC26Q2I0M4 334 aa15.52■□□□□ 0.07
CHRNA1-205ENST00000409542 LHX8Q68G74 356 aa15.52■□□□□ 0.07
CHRNA1-205ENST00000409542 MAPKAPK5Q8IW41 473 aa15.52■□□□□ 0.07
CHRNA1-205ENST00000409542 GPRC5AQ8NFJ5 357 aa15.52■□□□□ 0.07
CHRNA1-205ENST00000409542 CLUAP1Q96AJ1 413 aa15.52■□□□□ 0.07
CHRNA1-205ENST00000409542 NUDT12Q9BQG2 462 aa15.52■□□□□ 0.07
CHRNA1-205ENST00000409542 UBE2OQ9C0C9 1292 aaKnown RBP15.52■□□□□ 0.07
CHRNA1-205ENST00000409542 SNRKQ9NRH2 765 aa15.52■□□□□ 0.07
CHRNA1-205ENST00000409542 PI4KBQ9UBF8 816 aa15.52■□□□□ 0.07
CHRNA1-205ENST00000409542 CDK5RAP2Q96SN8 1893 aa15.51■□□□□ 0.07
CHRNA1-205ENST00000409542 PNMA6EA0A0J9YXQ4 647 aa15.51■□□□□ 0.07
CHRNA1-205ENST00000409542 GORABQ5T7V8 394 aa15.51■□□□□ 0.07
CHRNA1-205ENST00000409542 TGFBRAP1Q8WUH2 860 aa15.51■□□□□ 0.07
CHRNA1-205ENST00000409542 TMOD4Q9NZQ9 345 aa15.51■□□□□ 0.07
CHRNA1-205ENST00000409542 LRP2BPQ9P2M1 347 aa15.51■□□□□ 0.07
CHRNA1-205ENST00000409542 HDAC5Q9UQL6 1122 aa15.51■□□□□ 0.07
CHRNA1-205ENST00000409542 MYO5AQ9Y4I1 1855 aaKnown RBP15.51■□□□□ 0.07
CHRNA1-205ENST00000409542 XRCC5P13010 732 aaKnown RBP15.5■□□□□ 0.07
CHRNA1-205ENST00000409542 MORN1Q5T089 497 aa15.5■□□□□ 0.07
CHRNA1-205ENST00000409542 METTL16Q86W50 562 aaKnown RBP15.5■□□□□ 0.07
CHRNA1-205ENST00000409542 PALD1Q9ULE6 856 aa15.5■□□□□ 0.07
CHRNA1-205ENST00000409542 STXBP5LQ9Y2K9 1186 aa15.5■□□□□ 0.07
CHRNA1-205ENST00000409542 CUL9Q8IWT3 2517 aa15.5■□□□□ 0.07
CHRNA1-205ENST00000409542 USP17L10C9JJH3 530 aa15.49■□□□□ 0.07
CHRNA1-205ENST00000409542 ASNSP08243 561 aa15.49■□□□□ 0.07
CHRNA1-205ENST00000409542 GNAI3P08754 354 aa15.49■□□□□ 0.07
CHRNA1-205ENST00000409542 ERVK-9P63128 1117 aa15.49■□□□□ 0.07
CHRNA1-205ENST00000409542 ERVK-24P63145 666 aa15.49■□□□□ 0.07
CHRNA1-205ENST00000409542 MDM2Q00987 491 aaPredicted RBP15.49■□□□□ 0.07
CHRNA1-205ENST00000409542 GPR142Q7Z601 462 aa15.49■□□□□ 0.07
CHRNA1-205ENST00000409542 PANK1Q8TE04 598 aa15.49■□□□□ 0.07
CHRNA1-205ENST00000409542 PAGR1Q9BTK6 254 aa15.49■□□□□ 0.07
CHRNA1-205ENST00000409542 EMILIN3Q9NT22 766 aa15.49■□□□□ 0.07
CHRNA1-205ENST00000409542 FLT1P17948 1338 aa15.49■□□□□ 0.07
CHRNA1-205ENST00000409542 CNMDO75829 334 aa15.48■□□□□ 0.07
CHRNA1-205ENST00000409542 ZKSCAN1P17029 563 aaPredicted RBP15.48■□□□□ 0.07
CHRNA1-205ENST00000409542 PPP4CP60510 307 aa15.48■□□□□ 0.07
CHRNA1-205ENST00000409542 DYNLL1P63167 89 aaKnown RBP15.48■□□□□ 0.07
CHRNA1-205ENST00000409542 NAA16Q6N069 864 aaPredicted RBP15.48■□□□□ 0.07
CHRNA1-205ENST00000409542 SOCS4Q8WXH5 440 aa15.48■□□□□ 0.07
CHRNA1-205ENST00000409542 DHX36Q9H2U1 1008 aaKnown RBP15.48■□□□□ 0.07
CHRNA1-205ENST00000409542 FLRT1Q9NZU1 646 aa15.48■□□□□ 0.07
CHRNA1-205ENST00000409542 SAP30BPQ9UHR5 308 aaKnown RBP15.48■□□□□ 0.07
CHRNA1-205ENST00000409542 ZBTB21Q9ULJ3 1066 aa15.48■□□□□ 0.07
CHRNA1-205ENST00000409542 NDUFB9Q9Y6M9 179 aa15.48■□□□□ 0.07
CHRNA1-205ENST00000409542 C19orf81C9J6K1 198 aa15.47■□□□□ 0.07
CHRNA1-205ENST00000409542 CYP2E1P05181 493 aaPredicted RBP15.47■□□□□ 0.07
CHRNA1-205ENST00000409542 MAPK4P31152 587 aa15.47■□□□□ 0.07
CHRNA1-205ENST00000409542 PLEKHH3Q7Z736 793 aa15.47■□□□□ 0.07
CHRNA1-205ENST00000409542 FOXP4Q8IVH2 680 aaPredicted RBP15.47■□□□□ 0.07
CHRNA1-205ENST00000409542 FRAT1Q92837 279 aaPredicted RBP15.47■□□□□ 0.07
CHRNA1-205ENST00000409542 DBNDD2Q9BQY9 259 aa15.47■□□□□ 0.07
CHRNA1-205ENST00000409542 ZBTB47Q9UFB7 747 aaPredicted RBP15.47■□□□□ 0.07
CHRNA1-205ENST00000409542 COG6Q9Y2V7 657 aa15.47■□□□□ 0.07
CHRNA1-205ENST00000409542 FOCADQ5VW36 1801 aa15.47■□□□□ 0.07
CHRNA1-205ENST00000409542 EYSQ5T1H1 3165 aa15.46■□□□□ 0.07
CHRNA1-205ENST00000409542 UQCRFS1P1P0C7P4 283 aa15.46■□□□□ 0.07
CHRNA1-205ENST00000409542 RGS2P41220 211 aa15.46■□□□□ 0.07
CHRNA1-205ENST00000409542 G3BP1Q13283 466 aaKnown RBP eCLIP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms