RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 FMR1NBQ8N0W7 255 aaPredicted RBP12.12□□□□□ -0.47
NIF3L1-204ENST00000409357 XAGE2Q96GT9 111 aa12.12□□□□□ -0.47
NIF3L1-204ENST00000409357 PAGR1Q9BTK6 254 aa12.12□□□□□ -0.47
NIF3L1-204ENST00000409357 CHPF2Q9P2E5 772 aa12.12□□□□□ -0.47
NIF3L1-204ENST00000409357 CDC23Q9UJX2 597 aa12.12□□□□□ -0.47
NIF3L1-204ENST00000409357 H0YIN7 160 aa12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 EBAG9O00559 213 aa12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 CHUKO15111 745 aa12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 MRPL12P52815 198 aaKnown RBP12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 FANCCQ00597 558 aa12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 RASSF7Q02833 373 aa12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 TBX2Q13207 712 aaPredicted RBP12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 CASP8Q14790 479 aa12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 ADCK5Q3MIX3 580 aa12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 KIF6Q6ZMV9 814 aa12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 GBP6Q6ZN66 633 aa12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 FERMT3Q86UX7 667 aa12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 SMARCC2Q8TAQ2 1214 aa12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 MAGEC3Q8TD91 643 aa12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 AFAP1L1Q8TED9 768 aa12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 MIEF2Q96C03 454 aa12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 FER1L6Q2WGJ9 1857 aa12.11□□□□□ -0.47
NIF3L1-204ENST00000409357 KLHL33A6NCF5 533 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 ERVV-1B6SEH8 477 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 FSBPO95073 299 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 RPS6KB1P23443 525 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 GNG11P61952 73 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 GNL2Q13823 731 aaKnown RBP12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 CRYMQ14894 314 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 ADALQ6DHV7 355 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 FAM173BQ6P4H8 233 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 KCNV1Q6PIU1 500 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 YTHDF3Q7Z739 585 aaKnown RBP12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 FMNL3Q8IVF7 1028 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 TTLL6Q8N841 843 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 CABS1Q96KC9 395 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 GGA2Q9UJY4 613 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 TIAM2Q8IVF5 1701 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 PNMA6EA0A0J9YXQ4 647 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 ANKRD33BA6NCL7 494 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 SRGNP10124 158 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 PDE6BP35913 854 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 AIMP1Q12904 312 aaKnown RBP12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 KRT32Q14532 448 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 PLCB4Q15147 1175 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 PREPLQ4J6C6 727 aaPredicted RBP12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 WLSQ5T9L3 541 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 HDGFL1Q5TGJ6 251 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 TSHZ3Q63HK5 1081 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 CREB3L3Q68CJ9 461 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 NECAB1Q8N987 351 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 XAGE3Q8WTP9 111 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 KAT2BQ92831 832 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 MCM8Q9UJA3 840 aa12.1□□□□□ -0.47
NIF3L1-204ENST00000409357 LAMB2P55268 1798 aa12.09□□□□□ -0.47
NIF3L1-204ENST00000409357 WHAMMP3Q1A5X7 153 aa12.09□□□□□ -0.47
NIF3L1-204ENST00000409357 BLOC1S2Q6QNY1 142 aa12.09□□□□□ -0.47
NIF3L1-204ENST00000409357 COPS6Q7L5N1 327 aa12.09□□□□□ -0.47
NIF3L1-204ENST00000409357 SLC51AQ86UW1 340 aa12.09□□□□□ -0.47
NIF3L1-204ENST00000409357 ZNF34Q8IZ26 560 aa12.09□□□□□ -0.47
NIF3L1-204ENST00000409357 GIMAP7Q8NHV1 300 aa12.09□□□□□ -0.47
NIF3L1-204ENST00000409357 RHPN1Q8TCX5 695 aa12.09□□□□□ -0.47
NIF3L1-204ENST00000409357 MRPS27Q92552 414 aaKnown RBP12.09□□□□□ -0.47
NIF3L1-204ENST00000409357 WDR24Q96S15 920 aa12.09□□□□□ -0.47
NIF3L1-204ENST00000409357 GOLPH3LQ9H4A5 285 aa12.09□□□□□ -0.47
NIF3L1-204ENST00000409357 FAM204AQ9H8W3 233 aa12.09□□□□□ -0.47
NIF3L1-204ENST00000409357 NFKBIEO00221 500 aa12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 ELF1P32519 619 aa12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 MCM6Q14566 821 aa12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 MAP9Q49MG5 647 aa12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 ERFEQ4G0M1 354 aa12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 SUSD4Q5VX71 490 aa12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 C9orf131Q5VYM1 1079 aa12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 PRPF40BQ6NWY9 871 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 OLFM4Q6UX06 510 aa12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 GIGYF2Q6Y7W6 1299 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 B4GALNT4Q76KP1 1039 aa12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 ELOA2Q8IYF1 753 aaPredicted RBP12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 NAA15Q9BXJ9 866 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 ABCB6Q9NP58 842 aa12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 DDX21Q9NR30 783 aaKnown RBP eCLIP12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 MYO1AQ9UBC5 1043 aa12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 FAM169AQ9Y6X4 670 aa12.08□□□□□ -0.48
NIF3L1-204ENST00000409357 KLRG2A4D1S0 409 aaPredicted RBP12.07□□□□□ -0.48
NIF3L1-204ENST00000409357 SRRM3A6NNA2 597 aaPredicted RBP12.07□□□□□ -0.48
NIF3L1-204ENST00000409357 ZEB2O60315 1214 aa12.07□□□□□ -0.48
NIF3L1-204ENST00000409357 NTSR2O95665 410 aa12.07□□□□□ -0.48
NIF3L1-204ENST00000409357 GCFC2P16383 781 aaKnown RBP12.07□□□□□ -0.48
NIF3L1-204ENST00000409357 FNTAP49354 379 aa12.07□□□□□ -0.48
NIF3L1-204ENST00000409357 CACNB1Q02641 598 aaPredicted RBP12.07□□□□□ -0.48
NIF3L1-204ENST00000409357 PTH1RQ03431 593 aa12.07□□□□□ -0.48
NIF3L1-204ENST00000409357 TOB2Q14106 344 aaPredicted RBP12.07□□□□□ -0.48
NIF3L1-204ENST00000409357 TPTE2Q6XPS3 522 aa12.07□□□□□ -0.48
NIF3L1-204ENST00000409357 C3orf67Q6ZVT6 689 aa12.07□□□□□ -0.48
NIF3L1-204ENST00000409357 DHX58Q96C10 678 aa12.07□□□□□ -0.48
NIF3L1-204ENST00000409357 EVI5LQ96CN4 794 aa12.07□□□□□ -0.48
NIF3L1-204ENST00000409357 BAG1Q99933 345 aaPredicted RBP12.07□□□□□ -0.48
NIF3L1-204ENST00000409357 BICC1Q9H694 974 aaKnown RBP12.07□□□□□ -0.48
NIF3L1-204ENST00000409357 RTEL1Q9NZ71 1219 aa12.07□□□□□ -0.48
NIF3L1-204ENST00000409357 PCNTO95613 3336 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms