RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 HERVK_113P62684 666 aa16.16■□□□□ 0.18
TUBA3D-202ENST00000409047 GSTO1P78417 241 aa16.16■□□□□ 0.18
TUBA3D-202ENST00000409047 LHX8Q68G74 356 aa16.16■□□□□ 0.18
TUBA3D-202ENST00000409047 TEX11Q8IYF3 940 aa16.16■□□□□ 0.18
TUBA3D-202ENST00000409047 TDHQ8IZJ6 230 aa16.16■□□□□ 0.18
TUBA3D-202ENST00000409047 DEFB123Q8N688 67 aa16.16■□□□□ 0.18
TUBA3D-202ENST00000409047 NEUROD6Q96NK8 337 aa16.16■□□□□ 0.18
TUBA3D-202ENST00000409047 MTMR10Q9NXD2 777 aa16.16■□□□□ 0.18
TUBA3D-202ENST00000409047 PI4KBQ9UBF8 816 aa16.16■□□□□ 0.18
TUBA3D-202ENST00000409047 HDAC5Q9UQL6 1122 aa16.16■□□□□ 0.18
TUBA3D-202ENST00000409047 PNMA6EA0A0J9YXQ4 647 aa16.15■□□□□ 0.18
TUBA3D-202ENST00000409047 RARSP54136 660 aaKnown RBP16.15■□□□□ 0.18
TUBA3D-202ENST00000409047 CACNB2Q08289 660 aaPredicted RBP16.15■□□□□ 0.18
TUBA3D-202ENST00000409047 CCL14Q16627 93 aa16.15■□□□□ 0.18
TUBA3D-202ENST00000409047 MORN1Q5T089 497 aa16.15■□□□□ 0.18
TUBA3D-202ENST00000409047 PORCNQ9H237 461 aa16.15■□□□□ 0.18
TUBA3D-202ENST00000409047 AS3MTQ9HBK9 375 aa16.15■□□□□ 0.18
TUBA3D-202ENST00000409047 RAI14Q9P0K7 980 aa16.15■□□□□ 0.18
TUBA3D-202ENST00000409047 TNNQ9UQP3 1299 aa16.15■□□□□ 0.18
TUBA3D-202ENST00000409047 ASNSP08243 561 aa16.14■□□□□ 0.17
TUBA3D-202ENST00000409047 CCND3P30281 292 aaPredicted RBP16.14■□□□□ 0.17
TUBA3D-202ENST00000409047 PPP4CP60510 307 aa16.14■□□□□ 0.17
TUBA3D-202ENST00000409047 IRX3P78415 501 aaPredicted RBP16.14■□□□□ 0.17
TUBA3D-202ENST00000409047 GPRC5AQ8NFJ5 357 aa16.14■□□□□ 0.17
TUBA3D-202ENST00000409047 NUDT12Q9BQG2 462 aa16.14■□□□□ 0.17
TUBA3D-202ENST00000409047 AATFQ9NY61 560 aaKnown RBP eCLIP16.14■□□□□ 0.17
TUBA3D-202ENST00000409047 STXBP5LQ9Y2K9 1186 aa16.14■□□□□ 0.17
TUBA3D-202ENST00000409047 FLT1P17948 1338 aa16.14■□□□□ 0.17
TUBA3D-202ENST00000409047 CDH23Q9H251 3354 aa16.13■□□□□ 0.17
TUBA3D-202ENST00000409047 GNAI3P08754 354 aa16.13■□□□□ 0.17
TUBA3D-202ENST00000409047 ERVK-9P63128 1117 aa16.13■□□□□ 0.17
TUBA3D-202ENST00000409047 ERVK-24P63145 666 aa16.13■□□□□ 0.17
TUBA3D-202ENST00000409047 LRRC26Q2I0M4 334 aa16.13■□□□□ 0.17
TUBA3D-202ENST00000409047 TGFBRAP1Q8WUH2 860 aa16.13■□□□□ 0.17
TUBA3D-202ENST00000409047 SOCS4Q8WXH5 440 aa16.13■□□□□ 0.17
TUBA3D-202ENST00000409047 ARHGAP45Q92619 1136 aa16.13■□□□□ 0.17
TUBA3D-202ENST00000409047 DHX36Q9H2U1 1008 aaKnown RBP16.13■□□□□ 0.17
TUBA3D-202ENST00000409047 EMILIN3Q9NT22 766 aa16.13■□□□□ 0.17
TUBA3D-202ENST00000409047 MYH1P12882 1939 aa16.12■□□□□ 0.17
TUBA3D-202ENST00000409047 C19orf81C9J6K1 198 aa16.12■□□□□ 0.17
TUBA3D-202ENST00000409047 CNMDO75829 334 aa16.12■□□□□ 0.17
TUBA3D-202ENST00000409047 GDF11O95390 407 aa16.12■□□□□ 0.17
TUBA3D-202ENST00000409047 GPR142Q7Z601 462 aa16.12■□□□□ 0.17
TUBA3D-202ENST00000409047 MAPKAPK5Q8IW41 473 aa16.12■□□□□ 0.17
TUBA3D-202ENST00000409047 SNRKQ9NRH2 765 aa16.12■□□□□ 0.17
TUBA3D-202ENST00000409047 LRP2BPQ9P2M1 347 aa16.12■□□□□ 0.17
TUBA3D-202ENST00000409047 PALD1Q9ULE6 856 aa16.12■□□□□ 0.17
TUBA3D-202ENST00000409047 ZBTB21Q9ULJ3 1066 aa16.12■□□□□ 0.17
TUBA3D-202ENST00000409047 USP17L10C9JJH3 530 aa16.11■□□□□ 0.17
TUBA3D-202ENST00000409047 CYP2E1P05181 493 aaPredicted RBP16.11■□□□□ 0.17
TUBA3D-202ENST00000409047 MAPK4P31152 587 aa16.11■□□□□ 0.17
TUBA3D-202ENST00000409047 NAA16Q6N069 864 aaPredicted RBP16.11■□□□□ 0.17
TUBA3D-202ENST00000409047 FOXP4Q8IVH2 680 aaPredicted RBP16.11■□□□□ 0.17
TUBA3D-202ENST00000409047 UBE2OQ9C0C9 1292 aaKnown RBP16.11■□□□□ 0.17
TUBA3D-202ENST00000409047 TMOD4Q9NZQ9 345 aa16.11■□□□□ 0.17
TUBA3D-202ENST00000409047 FLRT1Q9NZU1 646 aa16.11■□□□□ 0.17
TUBA3D-202ENST00000409047 SPTBN5Q9NRC6 3674 aaKnown RBP16.11■□□□□ 0.17
TUBA3D-202ENST00000409047 IGHA2P01877 340 aa16.1■□□□□ 0.17
TUBA3D-202ENST00000409047 UQCRFS1P1P0C7P4 283 aa16.1■□□□□ 0.17
TUBA3D-202ENST00000409047 TRIM27P14373 513 aa16.1■□□□□ 0.17
TUBA3D-202ENST00000409047 ZKSCAN1P17029 563 aaPredicted RBP16.1■□□□□ 0.17
TUBA3D-202ENST00000409047 GORABQ5T7V8 394 aa16.1■□□□□ 0.17
TUBA3D-202ENST00000409047 DBNDD2Q9BQY9 259 aa16.1■□□□□ 0.17
TUBA3D-202ENST00000409047 GINM1Q9NU53 330 aa16.1■□□□□ 0.17
TUBA3D-202ENST00000409047 LTBP2Q14767 1821 aa16.1■□□□□ 0.17
TUBA3D-202ENST00000409047 POTEB2H3BUK9 544 aa16.09■□□□□ 0.17
TUBA3D-202ENST00000409047 PLEKHH3Q7Z736 793 aa16.09■□□□□ 0.17
TUBA3D-202ENST00000409047 TRMT44Q8IYL2 757 aaKnown RBP16.09■□□□□ 0.17
TUBA3D-202ENST00000409047 C12orf42Q96LP6 360 aa16.09■□□□□ 0.17
TUBA3D-202ENST00000409047 APBA2Q99767 749 aa16.09■□□□□ 0.17
TUBA3D-202ENST00000409047 PIH1D3Q9NQM4 214 aaKnown RBP16.09■□□□□ 0.17
TUBA3D-202ENST00000409047 RLFQ13129 1914 aa16.08■□□□□ 0.16
TUBA3D-202ENST00000409047 BAG3O95817 575 aa16.08■□□□□ 0.16
TUBA3D-202ENST00000409047 GNAI2P04899 355 aa16.08■□□□□ 0.16
TUBA3D-202ENST00000409047 PLCG2P16885 1265 aa16.08■□□□□ 0.16
TUBA3D-202ENST00000409047 RGS2P41220 211 aa16.08■□□□□ 0.16
TUBA3D-202ENST00000409047 DYNLL1P63167 89 aaKnown RBP16.08■□□□□ 0.16
TUBA3D-202ENST00000409047 MDM2Q00987 491 aaPredicted RBP16.08■□□□□ 0.16
TUBA3D-202ENST00000409047 POLA2Q14181 598 aa16.08■□□□□ 0.16
TUBA3D-202ENST00000409047 TNNI3KQ59H18 835 aa16.08■□□□□ 0.16
TUBA3D-202ENST00000409047 GUCD1Q96NT3 240 aa16.08■□□□□ 0.16
TUBA3D-202ENST00000409047 PAGR1Q9BTK6 254 aa16.08■□□□□ 0.16
TUBA3D-202ENST00000409047 GPR108Q9NPR9 543 aa16.08■□□□□ 0.16
TUBA3D-202ENST00000409047 SAP30BPQ9UHR5 308 aaKnown RBP16.08■□□□□ 0.16
TUBA3D-202ENST00000409047 FPGT-TNNI3KV9GXZ4 949 aa16.08■□□□□ 0.16
TUBA3D-202ENST00000409047 GH2P01242 217 aa16.07■□□□□ 0.16
TUBA3D-202ENST00000409047 MAP2K5Q13163 448 aa16.07■□□□□ 0.16
TUBA3D-202ENST00000409047 G3BP1Q13283 466 aaKnown RBP eCLIP16.07■□□□□ 0.16
TUBA3D-202ENST00000409047 PDE3AQ14432 1141 aa16.07■□□□□ 0.16
TUBA3D-202ENST00000409047 TATDN1Q6P1N9 297 aa16.07■□□□□ 0.16
TUBA3D-202ENST00000409047 USP17L2Q6R6M4 530 aa16.07■□□□□ 0.16
TUBA3D-202ENST00000409047 GTF3C2Q8WUA4 911 aaPredicted RBP16.07■□□□□ 0.16
TUBA3D-202ENST00000409047 ZNF512BQ96KM6 892 aaPredicted RBP16.07■□□□□ 0.16
TUBA3D-202ENST00000409047 RABGAP1Q9Y3P9 1069 aa16.07■□□□□ 0.16
TUBA3D-202ENST00000409047 ZAP70P43403 619 aa16.06■□□□□ 0.16
TUBA3D-202ENST00000409047 CRACR2BQ8N4Y2 399 aaPredicted RBP16.06■□□□□ 0.16
TUBA3D-202ENST00000409047 TRPV1Q8NER1 839 aa16.06■□□□□ 0.16
TUBA3D-202ENST00000409047 NOL10Q9BSC4 688 aaKnown RBP16.06■□□□□ 0.16
TUBA3D-202ENST00000409047 BTBD7Q9P203 1132 aa16.06■□□□□ 0.16
TUBA3D-202ENST00000409047 NDUFB9Q9Y6M9 179 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms