RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 ZNF287Q9HBT7 754 aa16.33■□□□□ 0.2
VPREB1-202ENST00000403807 ZHX2Q9Y6X8 837 aa16.33■□□□□ 0.2
VPREB1-202ENST00000403807 USP17L5A8MUK1 530 aa16.32■□□□□ 0.2
VPREB1-202ENST00000403807 FOXP2O15409 715 aa16.32■□□□□ 0.2
VPREB1-202ENST00000403807 GDF11O95390 407 aa16.32■□□□□ 0.2
VPREB1-202ENST00000403807 GJA5P36382 358 aa16.32■□□□□ 0.2
VPREB1-202ENST00000403807 GTF2A2P52657 109 aa16.32■□□□□ 0.2
VPREB1-202ENST00000403807 PPARAQ07869 468 aa16.32■□□□□ 0.2
VPREB1-202ENST00000403807 SREBF2Q12772 1141 aa16.32■□□□□ 0.2
VPREB1-202ENST00000403807 ABCB5Q2M3G0 1257 aa16.32■□□□□ 0.2
VPREB1-202ENST00000403807 CCDC17Q96LX7 622 aa16.32■□□□□ 0.2
VPREB1-202ENST00000403807 DSCC1Q9BVC3 393 aa16.32■□□□□ 0.2
VPREB1-202ENST00000403807 MKNK2Q9HBH9 465 aa16.32■□□□□ 0.2
VPREB1-202ENST00000403807 IRF6O14896 467 aa16.31■□□□□ 0.2
VPREB1-202ENST00000403807 SGSM2O43147 1006 aa16.31■□□□□ 0.2
VPREB1-202ENST00000403807 TM4SF4P48230 202 aa16.31■□□□□ 0.2
VPREB1-202ENST00000403807 PDE4BQ07343 736 aa16.31■□□□□ 0.2
VPREB1-202ENST00000403807 SLC44A5Q8NCS7 719 aa16.31■□□□□ 0.2
VPREB1-202ENST00000403807 BEGAINQ9BUH8 593 aa16.31■□□□□ 0.2
VPREB1-202ENST00000403807 AS3MTQ9HBK9 375 aa16.31■□□□□ 0.2
VPREB1-202ENST00000403807 CTNNA3Q9UI47 895 aa16.31■□□□□ 0.2
VPREB1-202ENST00000403807 NAV1Q8NEY1 1877 aa16.31■□□□□ 0.2
VPREB1-202ENST00000403807 ZMYM6O95789 1325 aa16.3■□□□□ 0.2
VPREB1-202ENST00000403807 SMIM22K7EJ46 135 aa16.3■□□□□ 0.2
VPREB1-202ENST00000403807 MPHOSPH10O00566 681 aaKnown RBP16.3■□□□□ 0.2
VPREB1-202ENST00000403807 CXCL11O14625 94 aa16.3■□□□□ 0.2
VPREB1-202ENST00000403807 CDC45O75419 566 aa16.3■□□□□ 0.2
VPREB1-202ENST00000403807 GH2P01242 217 aa16.3■□□□□ 0.2
VPREB1-202ENST00000403807 SNAPC2Q13487 334 aa16.3■□□□□ 0.2
VPREB1-202ENST00000403807 KIAA1211Q6ZU35 1233 aa16.3■□□□□ 0.2
VPREB1-202ENST00000403807 TNS4Q8IZW8 715 aa16.3■□□□□ 0.2
VPREB1-202ENST00000403807 ZNF444Q8N0Y2 327 aaPredicted RBP16.3■□□□□ 0.2
VPREB1-202ENST00000403807 STK11IPQ8N1F8 1099 aa16.3■□□□□ 0.2
VPREB1-202ENST00000403807 ANAPC4Q9UJX5 808 aa16.3■□□□□ 0.2
VPREB1-202ENST00000403807 ZBTB21Q9ULJ3 1066 aa16.3■□□□□ 0.2
VPREB1-202ENST00000403807 AFG3L2Q9Y4W6 797 aa16.3■□□□□ 0.2
VPREB1-202ENST00000403807 ZNF213O14771 459 aa16.29■□□□□ 0.2
VPREB1-202ENST00000403807 CETPP11597 493 aa16.29■□□□□ 0.2
VPREB1-202ENST00000403807 JAG1P78504 1218 aa16.29■□□□□ 0.2
VPREB1-202ENST00000403807 RAB3GAP1Q15042 981 aa16.29■□□□□ 0.2
VPREB1-202ENST00000403807 OTUD7BQ6GQQ9 843 aa16.29■□□□□ 0.2
VPREB1-202ENST00000403807 ZNF280CQ8ND82 737 aa16.29■□□□□ 0.2
VPREB1-202ENST00000403807 MS4A4AQ96JQ5 239 aa16.29■□□□□ 0.2
VPREB1-202ENST00000403807 IL25Q9H293 177 aa16.29■□□□□ 0.2
VPREB1-202ENST00000403807 KCNH4Q9UQ05 1017 aa16.29■□□□□ 0.2
VPREB1-202ENST00000403807 ROBO3Q96MS0 1386 aa16.28■□□□□ 0.2
VPREB1-202ENST00000403807 BAZ2AQ9UIF9 1905 aaKnown RBP16.28■□□□□ 0.2
VPREB1-202ENST00000403807 CCL15-CCL14A0A0B4J2E2 113 aa16.28■□□□□ 0.2
VPREB1-202ENST00000403807 TESPA1A2RU30 521 aaPredicted RBP16.28■□□□□ 0.2
VPREB1-202ENST00000403807 CTDSPL2Q05D32 466 aa16.28■□□□□ 0.2
VPREB1-202ENST00000403807 SPP2Q13103 211 aa16.28■□□□□ 0.2
VPREB1-202ENST00000403807 CCL15Q16663 113 aa16.28■□□□□ 0.2
VPREB1-202ENST00000403807 TMEM179Q6ZVK1 233 aa16.28■□□□□ 0.2
VPREB1-202ENST00000403807 ESYT1Q9BSJ8 1104 aa16.28■□□□□ 0.2
VPREB1-202ENST00000403807 WDR18Q9BV38 432 aa16.28■□□□□ 0.2
VPREB1-202ENST00000403807 WBP1LQ9NX94 342 aa16.28■□□□□ 0.2
VPREB1-202ENST00000403807 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.28■□□□□ 0.2
VPREB1-202ENST00000403807 SIPA1L1O43166 1804 aa16.28■□□□□ 0.2
VPREB1-202ENST00000403807 DDX60LQ5H9U9 1706 aaKnown RBP16.28■□□□□ 0.2
VPREB1-202ENST00000403807 TRIM75PA6NK02 468 aa16.27■□□□□ 0.2
VPREB1-202ENST00000403807 AKR1B1P15121 316 aa16.27■□□□□ 0.2
VPREB1-202ENST00000403807 RASA1P20936 1047 aa16.27■□□□□ 0.2
VPREB1-202ENST00000403807 IMMTQ16891 758 aaKnown RBP16.27■□□□□ 0.2
VPREB1-202ENST00000403807 CCDC84Q86UT8 332 aaPredicted RBP16.27■□□□□ 0.2
VPREB1-202ENST00000403807 OTOFQ9HC10 1997 aa16.27■□□□□ 0.19
VPREB1-202ENST00000403807 CA12O43570 354 aa16.26■□□□□ 0.19
VPREB1-202ENST00000403807 PRDM1O75626 825 aa16.26■□□□□ 0.19
VPREB1-202ENST00000403807 ALDH1A1P00352 501 aa16.26■□□□□ 0.19
VPREB1-202ENST00000403807 PTH1RQ03431 593 aa16.26■□□□□ 0.19
VPREB1-202ENST00000403807 SEPT2Q15019 361 aa16.26■□□□□ 0.19
VPREB1-202ENST00000403807 SHROOM1Q2M3G4 852 aaPredicted RBP16.26■□□□□ 0.19
VPREB1-202ENST00000403807 FASTKD5Q7L8L6 764 aaKnown RBP16.26■□□□□ 0.19
VPREB1-202ENST00000403807 IFNL1Q8IU54 200 aa16.26■□□□□ 0.19
VPREB1-202ENST00000403807 A0A0G2JLL6 359 aaPredicted RBP16.25■□□□□ 0.19
VPREB1-202ENST00000403807 C19orf81C9J6K1 198 aa16.25■□□□□ 0.19
VPREB1-202ENST00000403807 USP17L10C9JJH3 530 aa16.25■□□□□ 0.19
VPREB1-202ENST00000403807 PCP11498 1178 aaKnown RBP16.25■□□□□ 0.19
VPREB1-202ENST00000403807 GUCY1A2P33402 732 aa16.25■□□□□ 0.19
VPREB1-202ENST00000403807 BACE1P56817 501 aa16.25■□□□□ 0.19
VPREB1-202ENST00000403807 HAND2P61296 217 aa16.25■□□□□ 0.19
VPREB1-202ENST00000403807 AKNAD1Q5T1N1 836 aa16.25■□□□□ 0.19
VPREB1-202ENST00000403807 MFSD6Q6ZSS7 791 aa16.25■□□□□ 0.19
VPREB1-202ENST00000403807 PRRT2Q7Z6L0 340 aaPredicted RBP16.25■□□□□ 0.19
VPREB1-202ENST00000403807 BRI3BPQ8WY22 251 aa16.25■□□□□ 0.19
VPREB1-202ENST00000403807 MAP4K1Q92918 833 aa16.25■□□□□ 0.19
VPREB1-202ENST00000403807 PTPN18Q99952 460 aa16.25■□□□□ 0.19
VPREB1-202ENST00000403807 RNF41Q9H4P4 317 aaPredicted RBP16.25■□□□□ 0.19
VPREB1-202ENST00000403807 KANSL2Q9H9L4 492 aa16.25■□□□□ 0.19
VPREB1-202ENST00000403807 RNF186Q9NXI6 227 aa16.25■□□□□ 0.19
VPREB1-202ENST00000403807 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
VPREB1-202ENST00000403807 FGRP09769 529 aa16.24■□□□□ 0.19
VPREB1-202ENST00000403807 TSPY3P0CV98 308 aa16.24■□□□□ 0.19
VPREB1-202ENST00000403807 TSPY8P0CW00 308 aa16.24■□□□□ 0.19
VPREB1-202ENST00000403807 STAG1Q8WVM7 1258 aa16.24■□□□□ 0.19
VPREB1-202ENST00000403807 ANO2Q9NQ90 1003 aa16.24■□□□□ 0.19
VPREB1-202ENST00000403807 INCENPQ9NQS7 918 aa16.24■□□□□ 0.19
VPREB1-202ENST00000403807 TOMM22Q9NS69 142 aa16.24■□□□□ 0.19
VPREB1-202ENST00000403807 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.24■□□□□ 0.19
VPREB1-202ENST00000403807 GTF3C3Q9Y5Q9 886 aa16.24■□□□□ 0.19
VPREB1-202ENST00000403807 DOCK1Q14185 1865 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms