RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 TEX13AQ9BXU3 409 aaPredicted RBP9.04□□□□□ -0.96
CEACAM1-208ENST00000403461 TAOK3Q9H2K8 898 aa9.04□□□□□ -0.96
CEACAM1-208ENST00000403461 KIAA1551Q9HCM1 1747 aa9.04□□□□□ -0.96
CEACAM1-208ENST00000403461 N4BP2Q86UW6 1770 aaPredicted RBP9.04□□□□□ -0.96
CEACAM1-208ENST00000403461 NFKBIEO00221 500 aa9.03□□□□□ -0.96
CEACAM1-208ENST00000403461 ARHGEF15O94989 841 aa9.03□□□□□ -0.96
CEACAM1-208ENST00000403461 PCSK2P16519 638 aa9.03□□□□□ -0.96
CEACAM1-208ENST00000403461 ST5P78524 1137 aa9.03□□□□□ -0.96
CEACAM1-208ENST00000403461 TEFQ10587 303 aa9.03□□□□□ -0.96
CEACAM1-208ENST00000403461 CMTR1Q8N1G2 835 aaKnown RBP9.03□□□□□ -0.96
CEACAM1-208ENST00000403461 LGR6Q9HBX8 967 aa9.03□□□□□ -0.96
CEACAM1-208ENST00000403461 MBIPQ9NS73 344 aa9.03□□□□□ -0.96
CEACAM1-208ENST00000403461 NSFL1CQ9UNZ2 370 aaKnown RBP9.03□□□□□ -0.96
CEACAM1-208ENST00000403461 USP20Q9Y2K6 914 aa9.03□□□□□ -0.96
CEACAM1-208ENST00000403461 CARMIL3Q8ND23 1372 aa9.02□□□□□ -0.97
CEACAM1-208ENST00000403461 TNRC6CQ9HCJ0 1690 aaKnown RBP9.02□□□□□ -0.97
CEACAM1-208ENST00000403461 DIAPH1O60610 1272 aaKnown RBP9.02□□□□□ -0.97
CEACAM1-208ENST00000403461 PDGFAP04085 211 aa9.02□□□□□ -0.97
CEACAM1-208ENST00000403461 RPLP1P05386 114 aaKnown RBP9.02□□□□□ -0.97
CEACAM1-208ENST00000403461 HMOX1P09601 288 aa9.02□□□□□ -0.97
CEACAM1-208ENST00000403461 HSPA5P11021 654 aaKnown RBP9.02□□□□□ -0.97
CEACAM1-208ENST00000403461 DNM1Q05193 864 aaKnown RBP9.02□□□□□ -0.97
CEACAM1-208ENST00000403461 CNBD1Q8NA66 436 aa9.02□□□□□ -0.97
CEACAM1-208ENST00000403461 EDEM1Q92611 657 aa9.02□□□□□ -0.97
CEACAM1-208ENST00000403461 SCARF2Q96GP6 870 aaPredicted RBP9.02□□□□□ -0.97
CEACAM1-208ENST00000403461 SETDB2Q96T68 719 aa9.02□□□□□ -0.97
CEACAM1-208ENST00000403461 KCNMB2Q9Y691 235 aa9.02□□□□□ -0.97
CEACAM1-208ENST00000403461 COL5A3P25940 1745 aaPredicted RBP9.02□□□□□ -0.97
CEACAM1-208ENST00000403461 LTBP3Q9NS15 1303 aa9.02□□□□□ -0.97
CEACAM1-208ENST00000403461 C2CD2LO14523 706 aa9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 EGFRP00533 1210 aa9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 BMP4P12644 408 aa9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 IL6STP40189 918 aaPredicted RBP9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 USP5P45974 858 aa9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 EIF5P55010 431 aaKnown RBP9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 SRSF11Q05519 484 aaKnown RBP9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 SPEM2Q0P670 501 aa9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 CCINQ13939 588 aa9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 MTHFSDQ2M296 383 aaKnown RBP9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 STYK1Q6J9G0 422 aa9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 LYPD4Q6UWN0 246 aa9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 GSX2Q9BZM3 304 aa9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 EFCC1Q9HA90 598 aa9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 BRPF3Q9ULD4 1205 aa9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 POLIQ9UNA4 740 aa9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 FNDC3AQ9Y2H6 1198 aaKnown RBP9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 MRC1P22897 1456 aa9.01□□□□□ -0.97
CEACAM1-208ENST00000403461 NDUFB5O43674 189 aa9□□□□□ -0.97
CEACAM1-208ENST00000403461 XYLBO75191 536 aa9□□□□□ -0.97
CEACAM1-208ENST00000403461 MAP2K3P46734 347 aa9□□□□□ -0.97
CEACAM1-208ENST00000403461 GRIN2CQ14957 1233 aa9□□□□□ -0.97
CEACAM1-208ENST00000403461 TBC1D9BQ66K14 1250 aa9□□□□□ -0.97
CEACAM1-208ENST00000403461 PRR5LQ6MZQ0 368 aa9□□□□□ -0.97
CEACAM1-208ENST00000403461 KANK3Q6NY19 840 aa9□□□□□ -0.97
CEACAM1-208ENST00000403461 LDHDQ86WU2 507 aa9□□□□□ -0.97
CEACAM1-208ENST00000403461 MASTLQ96GX5 879 aa9□□□□□ -0.97
CEACAM1-208ENST00000403461 FMNL2Q96PY5 1086 aa9□□□□□ -0.97
CEACAM1-208ENST00000403461 CITED4Q96RK1 184 aa9□□□□□ -0.97
CEACAM1-208ENST00000403461 PRR12Q9ULL5 1215 aa9□□□□□ -0.97
CEACAM1-208ENST00000403461 ZNF652Q9Y2D9 606 aa9□□□□□ -0.97
CEACAM1-208ENST00000403461 ARFGEF1Q9Y6D6 1849 aa8.99□□□□□ -0.97
CEACAM1-208ENST00000403461 GNAT3A8MTJ3 354 aa8.99□□□□□ -0.97
CEACAM1-208ENST00000403461 TRIP4Q15650 581 aaPredicted RBP8.99□□□□□ -0.97
CEACAM1-208ENST00000403461 CCDC93Q567U6 631 aa8.99□□□□□ -0.97
CEACAM1-208ENST00000403461 PRPF40BQ6NWY9 871 aaKnown RBP8.99□□□□□ -0.97
CEACAM1-208ENST00000403461 ZNF790Q6PG37 636 aa8.99□□□□□ -0.97
CEACAM1-208ENST00000403461 NBPF5PQ86XG9 351 aaPredicted RBP8.99□□□□□ -0.97
CEACAM1-208ENST00000403461 TTC16Q8NEE8 873 aa8.99□□□□□ -0.97
CEACAM1-208ENST00000403461 SLC30A3Q99726 388 aa8.99□□□□□ -0.97
CEACAM1-208ENST00000403461 PCGF6Q9BYE7 350 aa8.99□□□□□ -0.97
CEACAM1-208ENST00000403461 ENAMQ9NRM1 1142 aa8.99□□□□□ -0.97
CEACAM1-208ENST00000403461 DCTN4Q9UJW0 460 aa8.99□□□□□ -0.97
CEACAM1-208ENST00000403461 HEG1Q9ULI3 1381 aa8.99□□□□□ -0.97
CEACAM1-208ENST00000403461 TJP1Q07157 1748 aa8.98□□□□□ -0.97
CEACAM1-208ENST00000403461 U2SURPO15042 1029 aaKnown RBP8.98□□□□□ -0.97
CEACAM1-208ENST00000403461 DDNO94850 711 aaPredicted RBP8.98□□□□□ -0.97
CEACAM1-208ENST00000403461 CTCFP49711 727 aaPredicted RBP8.98□□□□□ -0.97
CEACAM1-208ENST00000403461 ZNF468Q5VIY5 522 aaPredicted RBP8.98□□□□□ -0.97
CEACAM1-208ENST00000403461 ZNF496Q96IT1 587 aaPredicted RBP8.98□□□□□ -0.97
CEACAM1-208ENST00000403461 AVENQ9NQS1 362 aaPredicted RBP8.98□□□□□ -0.97
CEACAM1-208ENST00000403461 PRDM10Q9NQV6 1147 aa8.98□□□□□ -0.97
CEACAM1-208ENST00000403461 CNTNAP1P78357 1384 aa8.98□□□□□ -0.97
CEACAM1-208ENST00000403461 BTBD11A6QL63 1104 aa8.97□□□□□ -0.97
CEACAM1-208ENST00000403461 CELA2BP08218 269 aaPredicted RBP8.97□□□□□ -0.97
CEACAM1-208ENST00000403461 SRGNP10124 158 aa8.97□□□□□ -0.97
CEACAM1-208ENST00000403461 EHHADHQ08426 723 aa8.97□□□□□ -0.97
CEACAM1-208ENST00000403461 EAPPQ56P03 285 aaPredicted RBP8.97□□□□□ -0.97
CEACAM1-208ENST00000403461 PNMA8AQ86V59 439 aaPredicted RBP8.97□□□□□ -0.97
CEACAM1-208ENST00000403461 RTKN2Q8IZC4 609 aa8.97□□□□□ -0.97
CEACAM1-208ENST00000403461 GJD3Q8N144 294 aa8.97□□□□□ -0.97
CEACAM1-208ENST00000403461 PNMA5Q96PV4 448 aa8.97□□□□□ -0.97
CEACAM1-208ENST00000403461 HACL1Q9UJ83 578 aa8.97□□□□□ -0.97
CEACAM1-208ENST00000403461 BRCA1P38398 1863 aaKnown RBP8.97□□□□□ -0.97
CEACAM1-208ENST00000403461 SASH3O75995 380 aa8.96□□□□□ -0.98
CEACAM1-208ENST00000403461 CAMTA2O94983 1202 aa8.96□□□□□ -0.98
CEACAM1-208ENST00000403461 ARAFP10398 606 aa8.96□□□□□ -0.98
CEACAM1-208ENST00000403461 NPR1P16066 1061 aa8.96□□□□□ -0.98
CEACAM1-208ENST00000403461 C8orf34Q49A92 452 aa8.96□□□□□ -0.98
CEACAM1-208ENST00000403461 CC2D1BQ5T0F9 858 aaKnown RBP8.96□□□□□ -0.98
CEACAM1-208ENST00000403461 PDE12Q6L8Q7 609 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms