RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 C8orf37Q96NL8 207 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 PARP2Q9UGN5 583 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 GGA1Q9UJY5 639 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 USP54Q70EL1 1684 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 TRIP11Q15643 1979 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 ATP5J2-PTCD1G3V325 749 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 CALUO43852 315 aaPredicted RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 PYGLP06737 847 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 IGBP1P78318 339 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 FAM160B1Q5W0V3 765 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 CCDC84Q86UT8 332 aaPredicted RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 USP48Q86UV5 1035 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 CCDC124Q96CT7 223 aaKnown RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 CLEC11AQ9Y240 323 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 FAM13AO94988 1023 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 RAPGEF3O95398 923 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 FDX1P10109 184 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 NAA16Q6N069 864 aaPredicted RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 ARHGAP24Q8N264 748 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 MRFAP1L1Q96HT8 127 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 ADPGKQ9BRR6 497 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 TRIM45Q9H8W5 580 aaPredicted RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 MTRF1LQ9UGC7 380 aaKnown RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 DPP7Q9UHL4 492 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 DISP1Q96F81 1524 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 UBN2Q6ZU65 1347 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 CCDC151A5D8V7 595 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 PTCD1O75127 700 aaKnown RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 MECOMQ03112 1051 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 EZH2Q15910 746 aaKnown RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 MPRIPQ6WCQ1 1025 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 ZNF771Q7L3S4 317 aaPredicted RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 CCDC170Q8IYT3 715 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 STK11IPQ8N1F8 1099 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 PSMD1Q99460 953 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 AMOTL2Q9Y2J4 779 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 ATP6V0A2Q9Y487 856 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 MED14O60244 1454 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 UBR2Q8IWV8 1755 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 FLT1P17948 1338 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 PLEKHG3A1L390 1219 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 HSF2BPO75031 334 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 KPNA2P52292 529 aaKnown RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 PPP2R3AQ06190 1150 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 DMP1Q13316 513 aaPredicted RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 PUM3Q15397 648 aaKnown RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 TDRD12Q587J7 1177 aaKnown RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 RUFY4Q6ZNE9 571 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 ANKRD13DQ6ZTN6 518 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 SLFN12Q8IYM2 578 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 AFAP1Q8N556 730 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 CACTINQ8WUQ7 758 aaKnown RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 KCNH4Q9UQ05 1017 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 NBPF26B4DH59 902 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 CYLC1P35663 651 aaPredicted RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 PEX6Q13608 980 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 SEPT6Q14141 434 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 MSL1Q68DK7 614 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 RTKN2Q8IZC4 609 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 ABI1Q8IZP0 508 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 VCX3AQ9NNX9 186 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 ZNF212Q9UDV6 495 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 TMEM2Q9UHN6 1383 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 MIA3Q5JRA6 1907 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 MEIS1O00470 390 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 GRIN3BO60391 1043 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 MYL1P05976 194 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 PARP1P09874 1014 aaKnown RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 ZNF853P0CG23 659 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 MYL6BP14649 208 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 CDC37Q16543 378 aaPredicted RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 SUPT20HL1Q3ZLR7 823 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 CHD1LQ86WJ1 897 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 NLGN1Q8N2Q7 840 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 BBOF1Q8ND07 529 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 RPGRIP1Q96KN7 1286 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 GDAP1L1Q96MZ0 367 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 PRR12Q9ULL5 1215 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 RRP7AQ9Y3A4 280 aaKnown RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 DIP2CQ9Y2E4 1556 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 TMCC1O94876 653 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 PHBP35232 272 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 LMNB2Q03252 620 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 NFIAQ12857 509 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 BFSP1Q12934 665 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 SEL1L2Q5TEA6 688 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 CEP85Q6P2H3 762 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 TRMT44Q8IYL2 757 aaKnown RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 TBC1D19Q8N5T2 526 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 CCHCR1Q8TD31 782 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 HAUS7Q99871 368 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 TRIM7Q9C029 511 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 TYW1Q9NV66 732 aaKnown RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 FBXO40Q9UH90 709 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 PTPRMP28827 1452 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 ORC2Q13416 577 aaPredicted RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 SULT6B1Q6IMI4 303 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 RSRC2Q7L4I2 434 aaKnown RBP3.03□□□□□ -1.92
CHD9-202ENST00000398510 CNGA4Q8IV77 575 aa3.03□□□□□ -1.92
CHD9-202ENST00000398510 GRK7Q8WTQ7 553 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms