RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 SURF6O75683 361 aaKnown RBP14.63□□□□□ -0.07
SYNE4-203ENST00000397428 BMP8BP34820 402 aa14.63□□□□□ -0.07
SYNE4-203ENST00000397428 TRIM32Q13049 653 aa14.63□□□□□ -0.07
SYNE4-203ENST00000397428 MTMR2Q13614 643 aa14.63□□□□□ -0.07
SYNE4-203ENST00000397428 MAP3K21Q5TCX8 1036 aa14.63□□□□□ -0.07
SYNE4-203ENST00000397428 ZKSCAN2Q63HK3 967 aa14.63□□□□□ -0.07
SYNE4-203ENST00000397428 POTEEQ6S8J3 1075 aa14.63□□□□□ -0.07
SYNE4-203ENST00000397428 MAPKAPK5Q8IW41 473 aa14.63□□□□□ -0.07
SYNE4-203ENST00000397428 GPRC5AQ8NFJ5 357 aa14.63□□□□□ -0.07
SYNE4-203ENST00000397428 DIS3LQ8TF46 1054 aaKnown RBP14.63□□□□□ -0.07
SYNE4-203ENST00000397428 USP6NLQ92738 828 aa14.63□□□□□ -0.07
SYNE4-203ENST00000397428 TXNRD2Q9NNW7 524 aa14.63□□□□□ -0.07
SYNE4-203ENST00000397428 PIH1D3Q9NQM4 214 aaKnown RBP14.63□□□□□ -0.07
SYNE4-203ENST00000397428 TMOD4Q9NZQ9 345 aa14.63□□□□□ -0.07
SYNE4-203ENST00000397428 STAP2Q9UGK3 403 aa14.63□□□□□ -0.07
SYNE4-203ENST00000397428 PLXNB2O15031 1838 aa14.63□□□□□ -0.07
SYNE4-203ENST00000397428 SIPA1L1O43166 1804 aa14.63□□□□□ -0.07
SYNE4-203ENST00000397428 TRIOBPQ9H2D6 2365 aa14.63□□□□□ -0.07
SYNE4-203ENST00000397428 FLT1P17948 1338 aa14.63□□□□□ -0.07
SYNE4-203ENST00000397428 ZAP70P43403 619 aa14.62□□□□□ -0.07
SYNE4-203ENST00000397428 HERVK_113P62684 666 aa14.62□□□□□ -0.07
SYNE4-203ENST00000397428 SHROOM1Q2M3G4 852 aaPredicted RBP14.62□□□□□ -0.07
SYNE4-203ENST00000397428 Q3C1V9 767 aa14.62□□□□□ -0.07
SYNE4-203ENST00000397428 TRIB2Q92519 343 aa14.62□□□□□ -0.07
SYNE4-203ENST00000397428 GDF15Q99988 308 aa14.62□□□□□ -0.07
SYNE4-203ENST00000397428 EMILIN3Q9NT22 766 aa14.62□□□□□ -0.07
SYNE4-203ENST00000397428 OGDHLQ9ULD0 1010 aa14.62□□□□□ -0.07
SYNE4-203ENST00000397428 PEX10O60683 326 aa14.61□□□□□ -0.07
SYNE4-203ENST00000397428 IRX3P78415 501 aaPredicted RBP14.61□□□□□ -0.07
SYNE4-203ENST00000397428 TATDN1Q6P1N9 297 aa14.61□□□□□ -0.07
SYNE4-203ENST00000397428 CRACR2BQ8N4Y2 399 aaPredicted RBP14.61□□□□□ -0.07
SYNE4-203ENST00000397428 NUDT12Q9BQG2 462 aa14.61□□□□□ -0.07
SYNE4-203ENST00000397428 NBPF3Q9H094 633 aa14.61□□□□□ -0.07
SYNE4-203ENST00000397428 CDK5RAP2Q96SN8 1893 aa14.61□□□□□ -0.07
SYNE4-203ENST00000397428 CYP2B6P20813 491 aa14.6□□□□□ -0.07
SYNE4-203ENST00000397428 CYP7A1P22680 504 aa14.6□□□□□ -0.07
SYNE4-203ENST00000397428 MAPK4P31152 587 aa14.6□□□□□ -0.07
SYNE4-203ENST00000397428 DYNLL1P63167 89 aaKnown RBP14.6□□□□□ -0.07
SYNE4-203ENST00000397428 USP17L2Q6R6M4 530 aa14.6□□□□□ -0.07
SYNE4-203ENST00000397428 TRMT44Q8IYL2 757 aaKnown RBP14.6□□□□□ -0.07
SYNE4-203ENST00000397428 EAF2Q96CJ1 260 aaPredicted RBP14.6□□□□□ -0.07
SYNE4-203ENST00000397428 SAP30BPQ9UHR5 308 aaKnown RBP14.6□□□□□ -0.07
SYNE4-203ENST00000397428 DBNLQ9UJU6 430 aaKnown RBP14.6□□□□□ -0.07
SYNE4-203ENST00000397428 ZBTB21Q9ULJ3 1066 aa14.6□□□□□ -0.07
SYNE4-203ENST00000397428 SZT2Q5T011 3432 aa14.6□□□□□ -0.07
SYNE4-203ENST00000397428 FOCADQ5VW36 1801 aa14.59□□□□□ -0.07
SYNE4-203ENST00000397428 MYO5AQ9Y4I1 1855 aaKnown RBP14.59□□□□□ -0.07
SYNE4-203ENST00000397428 SOX1O00570 391 aaPredicted RBP14.59□□□□□ -0.07
SYNE4-203ENST00000397428 OS9Q13438 667 aaPredicted RBP14.59□□□□□ -0.07
SYNE4-203ENST00000397428 MORN1Q5T089 497 aa14.59□□□□□ -0.07
SYNE4-203ENST00000397428 TMED8Q6PL24 325 aaPredicted RBP14.59□□□□□ -0.07
SYNE4-203ENST00000397428 CERS3Q8IU89 383 aa14.59□□□□□ -0.07
SYNE4-203ENST00000397428 SOCS4Q8WXH5 440 aa14.59□□□□□ -0.07
SYNE4-203ENST00000397428 CCDC8Q9H0W5 538 aaPredicted RBP14.59□□□□□ -0.07
SYNE4-203ENST00000397428 ALPK3Q96L96 1907 aa14.58□□□□□ -0.07
SYNE4-203ENST00000397428 GDF11O95390 407 aa14.58□□□□□ -0.08
SYNE4-203ENST00000397428 HLA-DOAP06340 250 aa14.58□□□□□ -0.08
SYNE4-203ENST00000397428 ERVK-9P63128 1117 aa14.58□□□□□ -0.08
SYNE4-203ENST00000397428 ERVK-24P63145 666 aa14.58□□□□□ -0.08
SYNE4-203ENST00000397428 CACNB2Q08289 660 aaPredicted RBP14.58□□□□□ -0.08
SYNE4-203ENST00000397428 LHX8Q68G74 356 aa14.58□□□□□ -0.08
SYNE4-203ENST00000397428 GTF3C2Q8WUA4 911 aaPredicted RBP14.58□□□□□ -0.08
SYNE4-203ENST00000397428 C12orf42Q96LP6 360 aa14.58□□□□□ -0.08
SYNE4-203ENST00000397428 TRIM34Q9BYJ4 488 aa14.58□□□□□ -0.08
SYNE4-203ENST00000397428 EHD4Q9H223 541 aa14.58□□□□□ -0.08
SYNE4-203ENST00000397428 PORCNQ9H237 461 aa14.58□□□□□ -0.08
SYNE4-203ENST00000397428 C11orf49Q9H6J7 331 aa14.58□□□□□ -0.08
SYNE4-203ENST00000397428 TLR7Q9NYK1 1049 aaKnown RBP14.58□□□□□ -0.08
SYNE4-203ENST00000397428 GH2P01242 217 aa14.57□□□□□ -0.08
SYNE4-203ENST00000397428 COL6A1P12109 1028 aa14.57□□□□□ -0.08
SYNE4-203ENST00000397428 PRKAR2AP13861 404 aaKnown RBP14.57□□□□□ -0.08
SYNE4-203ENST00000397428 PLEKHH3Q7Z736 793 aa14.57□□□□□ -0.08
SYNE4-203ENST00000397428 C7orf61Q8IZ16 206 aa14.57□□□□□ -0.08
SYNE4-203ENST00000397428 RABGAP1Q9Y3P9 1069 aa14.57□□□□□ -0.08
SYNE4-203ENST00000397428 MAST2Q6P0Q8 1798 aa14.57□□□□□ -0.08
SYNE4-203ENST00000397428 USP17L15C9J2P7 530 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 USP17L13C9JLJ4 530 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 USP17L11C9JVI0 530 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 USP17L18D6R9N7 530 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 USP17L22D6RA61 530 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 USP17L17D6RBQ6 530 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 USP17L19D6RCP7 530 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 USP17L20D6RJB6 530 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 CNMDO75829 334 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 RLBP1P12271 317 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 USP17L24Q0WX57 530 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 GPR153Q6NV75 609 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 CATSPERGQ6ZRH7 1159 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 GPR142Q7Z601 462 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 TTC6Q86TZ1 520 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 LRCH3Q96II8 777 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 KIAA1683Q9H0B3 1180 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 ANTXR1Q9H6X2 564 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 C1orf115Q9H7X2 142 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 SERPINB13Q9UIV8 391 aa14.56□□□□□ -0.08
SYNE4-203ENST00000397428 IDH1O75874 414 aaKnown RBP14.55□□□□□ -0.08
SYNE4-203ENST00000397428 RGS2P41220 211 aa14.55□□□□□ -0.08
SYNE4-203ENST00000397428 USP5P45974 858 aa14.55□□□□□ -0.08
SYNE4-203ENST00000397428 MAP3K12Q12852 859 aa14.55□□□□□ -0.08
SYNE4-203ENST00000397428 PDE3AQ14432 1141 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms