RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 ZBTB43O43298 467 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 NRDCO43847 1150 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 TFRCP02786 760 aaKnown RBP10.68□□□□□ -0.7
NDE1-201ENST00000396354 TOP1P11387 765 aaKnown RBP10.68□□□□□ -0.7
NDE1-201ENST00000396354 GYG1P46976 350 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 ANKRD7Q92527 254 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 ZNF274Q96GC6 653 aaPredicted RBP10.68□□□□□ -0.7
NDE1-201ENST00000396354 MRFAP1L1Q96HT8 127 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 HINFPQ9BQA5 517 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 LLPHQ9BRT6 129 aaKnown RBP10.68□□□□□ -0.7
NDE1-201ENST00000396354 SCN7AQ01118 1682 aa10.68□□□□□ -0.7
NDE1-201ENST00000396354 CYP2D7A0A087X1C5 515 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 FAM205CA6NFA0 338 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 NUBP1P53384 320 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 GYS2P54840 703 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 UBE3CQ15386 1083 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 RBM43Q6ZSC3 357 aaKnown RBP10.67□□□□□ -0.7
NDE1-201ENST00000396354 KCNG4Q8TDN1 519 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 SDR42E1Q8WUS8 393 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 CELF1Q92879 486 aaKnown RBP10.67□□□□□ -0.7
NDE1-201ENST00000396354 CARD6Q9BX69 1037 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 PCDHA5Q9Y5H7 936 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 SLC12A7Q9Y666 1083 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 SLU7O95391 586 aaKnown RBP10.67□□□□□ -0.7
NDE1-201ENST00000396354 GNG11P61952 73 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 OLFM4Q6UX06 510 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.67□□□□□ -0.7
NDE1-201ENST00000396354 FBXL16Q8N461 479 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 MPHOSPH8Q99549 860 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 CACNA1SQ13698 1873 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 GSG1L2A8MUP6 293 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 CTIFO43310 598 aaKnown RBP10.67□□□□□ -0.7
NDE1-201ENST00000396354 PDE4BQ07343 736 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 CPLX2Q6PUV4 134 aaKnown RBP10.67□□□□□ -0.7
NDE1-201ENST00000396354 SHC4Q6S5L8 630 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 RTEL1Q9NZ71 1219 aa10.67□□□□□ -0.7
NDE1-201ENST00000396354 ANGEL1Q9UNK9 670 aaKnown RBP10.67□□□□□ -0.7
NDE1-201ENST00000396354 TNRC6CQ9HCJ0 1690 aaKnown RBP10.67□□□□□ -0.7
NDE1-201ENST00000396354 PDIA4P13667 645 aaKnown RBP10.66□□□□□ -0.7
NDE1-201ENST00000396354 RXRBP28702 533 aa10.66□□□□□ -0.7
NDE1-201ENST00000396354 KRT27Q7Z3Y8 459 aa10.66□□□□□ -0.7
NDE1-201ENST00000396354 TICAM2Q86XR7 235 aa10.66□□□□□ -0.7
NDE1-201ENST00000396354 ZCCHC17Q9NP64 241 aaKnown RBP10.66□□□□□ -0.7
NDE1-201ENST00000396354 FAM217BQ9NTX9 383 aaPredicted RBP10.66□□□□□ -0.7
NDE1-201ENST00000396354 PRR29P0C7W0 189 aa10.66□□□□□ -0.7
NDE1-201ENST00000396354 CDC25AP30304 524 aa10.66□□□□□ -0.7
NDE1-201ENST00000396354 MTF1Q14872 753 aa10.66□□□□□ -0.7
NDE1-201ENST00000396354 UBXN4Q92575 508 aa10.66□□□□□ -0.7
NDE1-201ENST00000396354 DHX58Q96C10 678 aa10.66□□□□□ -0.7
NDE1-201ENST00000396354 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.66□□□□□ -0.77e-8■■■■□ 23.4
NDE1-201ENST00000396354 CABP5Q9NP86 173 aa10.66□□□□□ -0.7
NDE1-201ENST00000396354 LRP2BPQ9P2M1 347 aa10.66□□□□□ -0.7
NDE1-201ENST00000396354 BAZ2AQ9UIF9 1905 aaKnown RBP10.65□□□□□ -0.7
NDE1-201ENST00000396354 A0A0U1RQJ8 604 aa10.65□□□□□ -0.7
NDE1-201ENST00000396354 SH2B2O14492 632 aaPredicted RBP10.65□□□□□ -0.7
NDE1-201ENST00000396354 RANBP6O60518 1105 aaKnown RBP10.65□□□□□ -0.7
NDE1-201ENST00000396354 SLC5A1P13866 664 aa10.65□□□□□ -0.7
NDE1-201ENST00000396354 ERCC3P19447 782 aa10.65□□□□□ -0.7
NDE1-201ENST00000396354 APOA5Q6Q788 366 aa10.65□□□□□ -0.7
NDE1-201ENST00000396354 OXER1Q8TDS5 423 aa10.65□□□□□ -0.7
NDE1-201ENST00000396354 ATRIPQ8WXE1 791 aa10.65□□□□□ -0.7
NDE1-201ENST00000396354 PLIN2Q99541 437 aa10.65□□□□□ -0.7
NDE1-201ENST00000396354 KCNH3Q9ULD8 1083 aa10.65□□□□□ -0.7
NDE1-201ENST00000396354 TIAM2Q8IVF5 1701 aa10.65□□□□□ -0.7
NDE1-201ENST00000396354 CCDC152Q4G0S7 254 aa10.65□□□□□ -0.7
NDE1-201ENST00000396354 DIS3L2Q8IYB7 885 aaKnown RBP10.65□□□□□ -0.7
NDE1-201ENST00000396354 IFNL3Q8IZI9 196 aa10.65□□□□□ -0.7
NDE1-201ENST00000396354 IGDCC4Q8TDY8 1250 aa10.65□□□□□ -0.7
NDE1-201ENST00000396354 ZSWIM5Q9P217 1185 aa10.65□□□□□ -0.7
NDE1-201ENST00000396354 PUF60Q9UHX1 559 aaKnown RBP10.65□□□□□ -0.7
NDE1-201ENST00000396354 RTL9Q8NET4 1388 aa10.65□□□□□ -0.7
NDE1-201ENST00000396354 PARP10Q53GL7 1025 aa10.65□□□□□ -0.71
NDE1-201ENST00000396354 FOXP4Q8IVH2 680 aaPredicted RBP10.65□□□□□ -0.71
NDE1-201ENST00000396354 LY9Q9HBG7 655 aa10.65□□□□□ -0.71
NDE1-201ENST00000396354 SAMSN1Q9NSI8 373 aaKnown RBP10.65□□□□□ -0.71
NDE1-201ENST00000396354 VPS54Q9P1Q0 977 aa10.65□□□□□ -0.71
NDE1-201ENST00000396354 SERTAD1Q9UHV2 236 aa10.65□□□□□ -0.71
NDE1-201ENST00000396354 CCT6AP40227 531 aaKnown RBP10.64□□□□□ -0.71
NDE1-201ENST00000396354 NLRP12P59046 1061 aa10.64□□□□□ -0.71
NDE1-201ENST00000396354 AXDND1Q5T1B0 1012 aaPredicted RBP10.64□□□□□ -0.71
NDE1-201ENST00000396354 RASSF8Q8NHQ8 419 aa10.64□□□□□ -0.71
NDE1-201ENST00000396354 AK7Q96M32 723 aa10.64□□□□□ -0.71
NDE1-201ENST00000396354 OGFRQ9NZT2 677 aa10.64□□□□□ -0.71
NDE1-201ENST00000396354 NFE2L3Q9Y4A8 694 aa10.64□□□□□ -0.71
NDE1-201ENST00000396354 PCDHB6Q9Y5E3 794 aa10.64□□□□□ -0.71
NDE1-201ENST00000396354 ZNF831Q5JPB2 1677 aa10.64□□□□□ -0.71
NDE1-201ENST00000396354 UQCRFS1P1P0C7P4 283 aa10.64□□□□□ -0.71
NDE1-201ENST00000396354 TTF1Q15361 905 aaPredicted RBP10.64□□□□□ -0.71
NDE1-201ENST00000396354 SLC4A4Q9Y6R1 1079 aa10.64□□□□□ -0.71
NDE1-201ENST00000396354 COL24A1Q17RW2 1714 aa10.64□□□□□ -0.71
NDE1-201ENST00000396354 MYL5Q02045 173 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 NOM1Q5C9Z4 860 aaKnown RBP10.63□□□□□ -0.71
NDE1-201ENST00000396354 ZNF397Q8NF99 534 aaPredicted RBP10.63□□□□□ -0.71
NDE1-201ENST00000396354 BLZF1Q9H2G9 400 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 RAI14Q9P0K7 980 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 ZNF804BA4D1E1 1349 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 SBF2Q86WG5 1849 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 TRIM37O94972 964 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 IGHMBP2P38935 993 aaKnown RBP10.63□□□□□ -0.71
NDE1-201ENST00000396354 GSDMDP57764 484 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms