RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ZNF444Q8N0Y2 327 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-209ENST00000394804 FANCBQ8NB91 859 aa13.22□□□□□ -0.29
UBE2D3-209ENST00000394804 ZNF287Q9HBT7 754 aa13.22□□□□□ -0.29
UBE2D3-209ENST00000394804 FMNL1O95466 1100 aaPredicted RBP13.21□□□□□ -0.29
UBE2D3-209ENST00000394804 IFNAR1P17181 557 aa13.21□□□□□ -0.29
UBE2D3-209ENST00000394804 MCM7P33993 719 aa13.21□□□□□ -0.29
UBE2D3-209ENST00000394804 CYLC1P35663 651 aaPredicted RBP13.21□□□□□ -0.29
UBE2D3-209ENST00000394804 TTC38Q5R3I4 469 aa13.21□□□□□ -0.29
UBE2D3-209ENST00000394804 FAM114A1Q8IWE2 563 aa13.21□□□□□ -0.29
UBE2D3-209ENST00000394804 DESI2Q9BSY9 194 aa13.21□□□□□ -0.29
UBE2D3-209ENST00000394804 VPS54Q9P1Q0 977 aa13.21□□□□□ -0.29
UBE2D3-209ENST00000394804 SPATA31A6Q5VVP1 1343 aa13.21□□□□□ -0.29
UBE2D3-209ENST00000394804 MCAMP43121 646 aa13.21□□□□□ -0.29
UBE2D3-209ENST00000394804 UBXN1Q04323 297 aa13.21□□□□□ -0.29
UBE2D3-209ENST00000394804 LONRF3Q496Y0 759 aa13.21□□□□□ -0.29
UBE2D3-209ENST00000394804 FOXP1Q9H334 677 aaPredicted RBP13.21□□□□□ -0.29
UBE2D3-209ENST00000394804 WWC3Q9ULE0 1092 aa13.21□□□□□ -0.29
UBE2D3-209ENST00000394804 LIFRP42702 1097 aa13.21□□□□□ -0.3
UBE2D3-209ENST00000394804 PLCD1P51178 756 aa13.21□□□□□ -0.3
UBE2D3-209ENST00000394804 GOLGA8FQ08AF8 430 aa13.21□□□□□ -0.3
UBE2D3-209ENST00000394804 GOLGA8DPQ0D2H9 430 aa13.21□□□□□ -0.3
UBE2D3-209ENST00000394804 TRIM14Q14142 442 aa13.21□□□□□ -0.3
UBE2D3-209ENST00000394804 CMTR1Q8N1G2 835 aaKnown RBP13.21□□□□□ -0.3
UBE2D3-209ENST00000394804 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.3
UBE2D3-209ENST00000394804 FDPSP14324 419 aaKnown RBP13.21□□□□□ -0.3
UBE2D3-209ENST00000394804 VPS16Q9H269 839 aa13.21□□□□□ -0.3
UBE2D3-209ENST00000394804 SEC63Q9UGP8 760 aaKnown RBP13.21□□□□□ -0.3
UBE2D3-209ENST00000394804 RHOXF2BP0C7M4 288 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 CKAP4Q07065 602 aaKnown RBP13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 RESP18Q5W5W9 173 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 TMTC1Q8IUR5 882 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 RHOXF2Q9BQY4 288 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 TRIM34Q9BYJ4 488 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 GNAQP50148 359 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 AMPD3Q01432 767 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 PPARAQ07869 468 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 SKIDA1Q1XH10 827 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 KMT5BQ4FZB7 885 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 TBC1D10CQ8IV04 446 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 NAPGQ99747 312 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 PIH1D3Q9NQM4 214 aaKnown RBP13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 MAN1B1Q9UKM7 699 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 GUCA1BQ9UMX6 200 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 LUC7L2Q9Y383 392 aaKnown RBP13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 KIF28PB7ZC32 967 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 WDHD1O75717 1129 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 MMP1P03956 469 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 PARP10Q53GL7 1025 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 ARMCX5Q6P1M9 558 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 HDXQ7Z353 690 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 USP21Q9UK80 565 aa13.2□□□□□ -0.3
UBE2D3-209ENST00000394804 A0A0G2JLW4 131 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 PRDM1O75626 825 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 FGFR1OPO95684 399 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 ERCC5P28715 1186 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 ATP6V1AP38606 617 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 CLCN6P51797 869 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 SCARF1Q14162 830 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 PTPN21Q16825 1174 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 ENOX1Q8TC92 643 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 ISCA1Q9BUE6 129 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 BMP2KQ9NSY1 1161 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 ZSWIM5Q9P217 1185 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 PIK3C2AO00443 1686 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 FAM208AQ9UK61 1670 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 KCNJ6P48051 423 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 KRT83P78385 493 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 PAK1Q13153 545 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 SPATA1Q5VX52 437 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 WWC2Q6AWC2 1192 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 NLRP10Q86W26 655 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 CARD10Q9BWT7 1032 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 EXOC1Q9NV70 894 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 ASAP1Q9ULH1 1129 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 OAS2P29728 719 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 SETQ01105 290 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 CYP26C1Q6V0L0 522 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 CYB5R4Q7L1T6 521 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 SMARCC1Q92922 1105 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 CCDC51Q96ER9 411 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 TNKSO95271 1327 aa13.19□□□□□ -0.3
UBE2D3-209ENST00000394804 hCG_1642624A0A1W2PR95 340 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 KRT86O43790 486 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 SSBP05455 408 aaKnown RBP eCLIP13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 KRT18P05783 430 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 E4F1Q66K89 784 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 NYAP1Q6ZVC0 841 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 TTLL11Q8NHH1 800 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 CALML4Q96GE6 196 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 JADE2Q9NQC1 790 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 MORC2Q9Y6X9 1032 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 AFF2P51816 1311 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 ZSCAN20P17040 1043 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 KRT9P35527 623 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 SLC4A8Q2Y0W8 1093 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 PIK3AP1Q6ZUJ8 805 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 CACNA2D4Q7Z3S7 1137 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 STAMQ92783 540 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 STRBPQ96SI9 672 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms