RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 FKBP15Q5T1M5 1219 aa18.28■□□□□ 0.52
PCDH1-203ENST00000394536 DZIP1Q86YF9 867 aaKnown RBP18.28■□□□□ 0.52
PCDH1-203ENST00000394536 C10orf67Q8IYJ2 551 aa18.28■□□□□ 0.52
PCDH1-203ENST00000394536 LRRN4CLQ8ND94 238 aa18.28■□□□□ 0.52
PCDH1-203ENST00000394536 TNKSO95271 1327 aa18.27■□□□□ 0.52
PCDH1-203ENST00000394536 STX10O60499 249 aa18.27■□□□□ 0.52
PCDH1-203ENST00000394536 PRR29P0C7W0 189 aa18.27■□□□□ 0.52
PCDH1-203ENST00000394536 FAM47AQ5JRC9 791 aa18.27■□□□□ 0.52
PCDH1-203ENST00000394536 SOGA3Q5TF21 947 aa18.27■□□□□ 0.52
PCDH1-203ENST00000394536 CNGA4Q8IV77 575 aa18.27■□□□□ 0.52
PCDH1-203ENST00000394536 TXLNBQ8N3L3 684 aa18.27■□□□□ 0.52
PCDH1-203ENST00000394536 MROH7-TTC4A0A0A0MT08 1334 aa18.27■□□□□ 0.52
PCDH1-203ENST00000394536 CYP2D7A0A087X1C5 515 aa18.27■□□□□ 0.52
PCDH1-203ENST00000394536 GNAT2P19087 354 aa18.27■□□□□ 0.52
PCDH1-203ENST00000394536 CASP14P31944 242 aa18.27■□□□□ 0.52
PCDH1-203ENST00000394536 SPA17Q15506 151 aa18.27■□□□□ 0.52
PCDH1-203ENST00000394536 GIGYF2Q6Y7W6 1299 aaKnown RBP18.27■□□□□ 0.52
PCDH1-203ENST00000394536 NBPF11Q86T75 865 aa18.27■□□□□ 0.52
PCDH1-203ENST00000394536 METTL16Q86W50 562 aaKnown RBP18.27■□□□□ 0.52
PCDH1-203ENST00000394536 STRBPQ96SI9 672 aaKnown RBP18.27■□□□□ 0.52
PCDH1-203ENST00000394536 CENPHQ9H3R5 247 aa18.27■□□□□ 0.52
PCDH1-203ENST00000394536 BTG4Q9NY30 223 aa18.27■□□□□ 0.52
PCDH1-203ENST00000394536 MTF1Q14872 753 aa18.27■□□□□ 0.51
PCDH1-203ENST00000394536 TTC38Q5R3I4 469 aa18.27■□□□□ 0.51
PCDH1-203ENST00000394536 OXER1Q8TDS5 423 aa18.27■□□□□ 0.51
PCDH1-203ENST00000394536 WDR24Q96S15 920 aa18.27■□□□□ 0.51
PCDH1-203ENST00000394536 CDC5LQ99459 802 aaKnown RBP18.27■□□□□ 0.51
PCDH1-203ENST00000394536 KAT14Q9H8E8 782 aa18.27■□□□□ 0.51
PCDH1-203ENST00000394536 VGLL3A8MV65 326 aa18.26■□□□□ 0.51
PCDH1-203ENST00000394536 GYG1P46976 350 aa18.26■□□□□ 0.51
PCDH1-203ENST00000394536 USP49Q70CQ1 688 aa18.26■□□□□ 0.51
PCDH1-203ENST00000394536 HEATR3Q7Z4Q2 680 aa18.26■□□□□ 0.51
PCDH1-203ENST00000394536 LCORLQ8N3X6 602 aa18.26■□□□□ 0.51
PCDH1-203ENST00000394536 GPR161Q8N6U8 529 aaKnown RBP18.26■□□□□ 0.51
PCDH1-203ENST00000394536 RSPH14Q9UHP6 348 aa18.26■□□□□ 0.51
PCDH1-203ENST00000394536 ATG3Q9NT62 314 aa18.26■□□□□ 0.51
PCDH1-203ENST00000394536 LUC7L2Q9Y383 392 aaKnown RBP18.26■□□□□ 0.51
PCDH1-203ENST00000394536 GRIN1Q05586 938 aa18.26■□□□□ 0.51
PCDH1-203ENST00000394536 RBL2Q08999 1139 aa18.26■□□□□ 0.51
PCDH1-203ENST00000394536 SAMD1Q6SPF0 538 aaPredicted RBP18.26■□□□□ 0.51
PCDH1-203ENST00000394536 NLRP10Q86W26 655 aa18.26■□□□□ 0.51
PCDH1-203ENST00000394536 SYMPKQ92797 1274 aaKnown RBP18.26■□□□□ 0.51
PCDH1-203ENST00000394536 PARD6BQ9BYG5 372 aa18.26■□□□□ 0.51
PCDH1-203ENST00000394536 RICTORQ6R327 1708 aa18.26■□□□□ 0.51
PCDH1-203ENST00000394536 EPS15P42566 896 aa18.25■□□□□ 0.51
PCDH1-203ENST00000394536 PPARAQ07869 468 aa18.25■□□□□ 0.51
PCDH1-203ENST00000394536 RESP18Q5W5W9 173 aa18.25■□□□□ 0.51
PCDH1-203ENST00000394536 MMP1P03956 469 aa18.25■□□□□ 0.51
PCDH1-203ENST00000394536 PDE4BQ07343 736 aa18.25■□□□□ 0.51
PCDH1-203ENST00000394536 CCDC122Q5T0U0 273 aa18.25■□□□□ 0.51
PCDH1-203ENST00000394536 ANKRD18AQ8IVF6 992 aa18.25■□□□□ 0.51
PCDH1-203ENST00000394536 ZNF444Q8N0Y2 327 aaPredicted RBP18.25■□□□□ 0.51
PCDH1-203ENST00000394536 PALLDQ8WX93 1383 aa18.25■□□□□ 0.51
PCDH1-203ENST00000394536 UBN2Q6ZU65 1347 aa18.25■□□□□ 0.51
PCDH1-203ENST00000394536 TEX33O43247 280 aa18.25■□□□□ 0.51
PCDH1-203ENST00000394536 SPAG1Q07617 926 aa18.25■□□□□ 0.51
PCDH1-203ENST00000394536 RASGRF1Q13972 1273 aa18.25■□□□□ 0.51
PCDH1-203ENST00000394536 MCM9Q9NXL9 1143 aa18.25■□□□□ 0.51
PCDH1-203ENST00000394536 USP17L12C9JPN9 530 aa18.24■□□□□ 0.51
PCDH1-203ENST00000394536 USP17L21D6R901 530 aa18.24■□□□□ 0.51
PCDH1-203ENST00000394536 IFNAR1P17181 557 aa18.24■□□□□ 0.51
PCDH1-203ENST00000394536 PTGDRQ13258 359 aa18.24■□□□□ 0.51
PCDH1-203ENST00000394536 SMARCC1Q92922 1105 aaPredicted RBP18.24■□□□□ 0.51
PCDH1-203ENST00000394536 ADGRL3Q9HAR2 1447 aa18.24■□□□□ 0.51
PCDH1-203ENST00000394536 MACROD2A1Z1Q3 448 aa18.24■□□□□ 0.51
PCDH1-203ENST00000394536 G3V3G9 751 aa18.24■□□□□ 0.51
PCDH1-203ENST00000394536 ZBTB22O15209 634 aa18.24■□□□□ 0.51
PCDH1-203ENST00000394536 DCAF8Q5TAQ9 597 aa18.24■□□□□ 0.51
PCDH1-203ENST00000394536 TCP11L1Q9NUJ3 509 aa18.24■□□□□ 0.51
PCDH1-203ENST00000394536 BMP15O95972 392 aa18.24■□□□□ 0.51
PCDH1-203ENST00000394536 ACRBPQ8NEB7 543 aa18.24■□□□□ 0.51
PCDH1-203ENST00000394536 RABEP2Q9H5N1 569 aa18.24■□□□□ 0.51
PCDH1-203ENST00000394536 MAP3K15Q6ZN16 1313 aa18.23■□□□□ 0.51
PCDH1-203ENST00000394536 PHLPP2Q6ZVD8 1323 aa18.23■□□□□ 0.51
PCDH1-203ENST00000394536 FMNL1O95466 1100 aaPredicted RBP18.23■□□□□ 0.51
PCDH1-203ENST00000394536 TDRD12Q587J7 1177 aaKnown RBP18.23■□□□□ 0.51
PCDH1-203ENST00000394536 PSMB7Q99436 277 aa18.23■□□□□ 0.51
PCDH1-203ENST00000394536 NAPGQ99747 312 aaPredicted RBP18.23■□□□□ 0.51
PCDH1-203ENST00000394536 POTEB2H3BUK9 544 aa18.23■□□□□ 0.51
PCDH1-203ENST00000394536 KIF5BP33176 963 aa18.23■□□□□ 0.51
PCDH1-203ENST00000394536 CTR9Q6PD62 1173 aa18.23■□□□□ 0.51
PCDH1-203ENST00000394536 AATFQ9NY61 560 aaKnown RBP eCLIP18.23■□□□□ 0.51
PCDH1-203ENST00000394536 PLCD1P51178 756 aa18.23■□□□□ 0.51
PCDH1-203ENST00000394536 FMR1Q06787 632 aaKnown RBP eCLIP18.23■□□□□ 0.51
PCDH1-203ENST00000394536 CCDC96Q2M329 555 aa18.23■□□□□ 0.51
PCDH1-203ENST00000394536 LY9Q9HBG7 655 aa18.23■□□□□ 0.51
PCDH1-203ENST00000394536 ENC1O14682 589 aa18.22■□□□□ 0.51
PCDH1-203ENST00000394536 PSMA7O14818 248 aa18.22■□□□□ 0.51
PCDH1-203ENST00000394536 AKR1B10O60218 316 aa18.22■□□□□ 0.51
PCDH1-203ENST00000394536 CLSTN1O94985 981 aa18.22■□□□□ 0.51
PCDH1-203ENST00000394536 ASIC1P78348 528 aa18.22■□□□□ 0.51
PCDH1-203ENST00000394536 SPATA1Q5VX52 437 aa18.22■□□□□ 0.51
PCDH1-203ENST00000394536 HDXQ7Z353 690 aa18.22■□□□□ 0.51
PCDH1-203ENST00000394536 CACNA2D4Q7Z3S7 1137 aa18.22■□□□□ 0.51
PCDH1-203ENST00000394536 SLC35F6Q8N357 371 aa18.22■□□□□ 0.51
PCDH1-203ENST00000394536 PIGBQ92521 554 aa18.22■□□□□ 0.51
PCDH1-203ENST00000394536 ANKIB1Q9P2G1 1089 aa18.22■□□□□ 0.51
PCDH1-203ENST00000394536 TMEM94Q12767 1356 aa18.22■□□□□ 0.51
PCDH1-203ENST00000394536 PIP4K2BP78356 416 aa18.22■□□□□ 0.51
PCDH1-203ENST00000394536 PAK1Q13153 545 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms